VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Pcsk5 (ENSMUSG00000024713)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Pcsk5
note
: proprotein convertase subtilisin/kexin type 5 [Source:MGI Symbol;Acc:MGI:97515]
name
Pcsk5 (ENSMUSG00000024713)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000025618
name
Pcsk5 (ENSMUSG00000024713)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS50401.1
Uniprot/SWISSPROT:
Q04592
RefSeq_peptide:
NP_001177412
RefSeq_mRNA:
NM_001190483.1
RefSeq_mRNA_predicted:
XM_011247162.1
RefSeq_peptide_predicted:
XP_011245464.1
UCSC:uc008gxp.2
EMBL:
AC125203
EMBL:
AC126940
EMBL:
AC133509
EMBL:
AC147369
EMBL:
D12619
EMBL:
D17583
EMBL:
L14932
GO:
GO:0001822
GO:
GO:0001822
GO:
GO:0002001
GO:
GO:0004175
GO:
GO:0004252
GO:
GO:0005615
GO:
GO:0005788
GO:
GO:0005794
GO:
GO:0006465
GO:
GO:0006465
GO:
GO:0007507
GO:
GO:0007566
GO:
GO:0008233
GO:
GO:0008233
GO:
GO:0009952
GO:
GO:0009952
GO:
GO:0016021
GO:
GO:0016485
GO:
GO:0016485
GO:
GO:0016486
GO:
GO:0016486
GO:
GO:0019058
GO:
GO:0019058
GO:
GO:0030141
GO:
GO:0030323
GO:
GO:0035108
GO:
GO:0042089
GO:
GO:0042277
GO:
GO:0043043
GO:
GO:0043043
GO:
GO:0048566
GO:
GO:0048566
GO:
GO:0048706
GO:
GO:0048706
MEROPS:S08.076
MGI_trans_name:
Pcsk5-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005615
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005783
goslim_goa:
GO:0005794
goslim_goa:
GO:0008150
goslim_goa:
GO:0008233
goslim_goa:
GO:0009058
goslim_goa:
GO:0009790
goslim_goa:
GO:0016023
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0044403
goslim_goa:
GO:0048856
goslim_goa:
GO:0051604
protein_id:
AAA74636.1
protein_id:
BAA02143.1
protein_id:
BAA04507.1
Reactome:
R-MMU-162582
Reactome:
R-MMU-166520
Reactome:
R-MMU-167060
UniParc:
UPI0000022409
definition
note
: transcript_id=ENSMUST00000025618
protein_id
: ENSMUSP00000025618
translation
: MDWDWGNRCSRPGRRDLLCVLALLAGCLLPVCRTRVYTNHWAVKIAGGFAEADRIASKYGFINVGQIGALKDYYHFYHSRTIKRSVLSSRGTHSFISMEPKVEWIQQQVVKKRTKRDYDLSHAQSTYFNDPKWPSMWYMHCSDNTHPCQSDMNIEGAWKRGYTGKNIVVTILDDGIERTHPDLMQNYDALASCDVNGNDLDPMPRYDASNENKHGTRCAGEVAATANNSHCTVGIAFNAKIGGVRMLDGDVTDMVEAKSVSYNPQHVHIYSASWGPDDDGKTVDGPAPLTRQAFENGVRMGRRGLGSVFVWASGNGGRSKDHCSCDGYTNSIYTISISSTAESGKKPWYLEECSSTLATTYSSGESYDKKIITTDLRQRCTDNHTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSRAGHLNANDWKTNAAGFKVSHLYGFGLMDAEAMVMEAEKWTTVPQQHVCVESTDRQIKTIRPNSAVRSIYKASGCSDNPNHHVNYLEHVVVRITITHPRRGDLAIYLTSPSGTRSQLLANRLFDHSMEGFKNWEFMTIHCWGERAAGDWVLEVYDTPSQLRNFKTPGKLKEWSLVLYGTSVQPYSPTNEFPKVERFRYSRVEDPTDDYGAEDYAGPCDPECSEVGCDGPGPDHCSDCLHYYYKLKNNTRICVSSCPPGHYHADKKRCRKCAPNCESCFGSHGNQCLSCKYGYFLNEETSSCVTQCPDGSYEDIKKNVCGKCSENCKACIGFHNCTECKGGLSLQGSRCSVTCEDGQFFNGHDCQPCHRFCATCSGAGADGCINCTEGYVMEEGRCVQSCSVSYYLDHSSEGGYKSCKRCDNSCLTCNGPGFKNCSSCPSGYLLDLGTCQMGAICKDGEYIDDQGHCQTCEASCAKCWGPTQEDCISCPVTRVLDDGRCVMNCPSWKFEFKKQCHPCHYTCQGCQGSGPSNCTSCRADKHGQERFLYHGECLENCPVGHYPAKGHACLPCPDNCELCYNPHVCSRCMSGYVIIPPNHTCQKLECRQGEFQDSEYEECMPCEEGCLGCTEDDPGACTSCATGYYMFERHCYKACPEKTFGVKWECRACGTNCGSCDQHECYWCEEGFFLSGGSCVQDCGPGFHGDQELGECKPCHRACENCTGSGYNQCSSCQEGLQLWHGTCLWSTWPQVEGKDWNEAVPTEKPSLVRSLLQDRRKWKVQIKRDATSQNQPCHSSCKTCNGSLCASCPTGMYLWLQACVPSCPQGTWPSVTSGSCEKCSEDCVSCSGADLCQQCLSQPDNTLLLHEGRCYHSCPEGFYAKDGVCEHCSSPCKTCEGNATSCNSCEGDFVLDHGVCWKTCPEKHVAVEGVCKHCPERCQDCIHEKTCKECMPDFFLYNDMCHRSCPKSFYPDMRQCVPCHKNCLECNGPKEDDCKVCADTSKALHNGLCLDECPEGTYKEEENDECRDCPESCLICSSAWTCLACREGFTVVHDVCTAPKECAAVEYWDEGSHRCQPCHKKCSRCSGPSEDQCYTCPRETFLLNTTCVKECPEGYHTDKDSQQCVLCHSSCRTCEGPHSMQCLSCRPGWFQLGKECLLQCRDGYYGESTSGRCEKCDKSCKSCRGPRPTDCQSCDTFFFLLRSKGQCHRACPEHYYADQHAQTCERCHPTCDKCSGKEAWSCLSCVWSYHLLKGICIPECIVGEYREGKGENFNCKKCHESCMECKGPGSKNCTGCSAGLLLDMDDNRCLHCCNASHSRRSQDCCDCQSSTDECILPAREAEFYEHTKTALLVTSGAMLLLLLGAAAVVWRKSRSRPVAKGRYEKLAEPTVSYSSYRSSYLDEDQVIEYRDRDYDEDDEDDIVYMGQDGTVYRKFKYGLLDETEDDELEYDDESYSYQ
name
type
misc_feature
link
xref
definition
note
: contig AC147369.3 11235..184037(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.