VariantTable
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BAC clone ordering.
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On read coverage region : Click to browse alignment view.
name
Rorb (ENSMUSG00000036192)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Rorb
note
: RAR-related orphan receptor beta [Source:MGI Symbol;Acc:MGI:1343464]
name
Rorb (ENSMUSG00000036192)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000112832
name
Rorb (ENSMUSG00000036192)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS37932.1
Uniprot/SWISSPROT:
Q8R1B8
RefSeq_peptide:
NP_001036819
RefSeq_mRNA:
NM_001043354.2
Vega_transcript:
OTTMUST00000057552
Vega_transcript:
Rorb-005
UCSC:uc008gye.2
EMBL:
AB258405
EMBL:
BC024842
EMBL:
BC058269
EMBL:
DQ779923
EMBL:
DQ779924
GO:
GO:0003700
GO:
GO:0003707
GO:
GO:0004879
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0006351
GO:
GO:0007601
GO:
GO:0008134
GO:
GO:0008270
GO:
GO:0030522
GO:
GO:0035881
GO:
GO:0042462
GO:
GO:0042752
GO:
GO:0043401
GO:
GO:0043565
GO:
GO:0045668
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0046548
GO:
GO:0046549
GO:
GO:0060041
GO:
GO:0071300
MGI_trans_name:
Rorb-005
Vega_translation:
222452
Vega_translation:
OTTMUSP00000027765
goslim_goa:
GO:0001071
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0004871
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0007165
goslim_goa:
GO:0008134
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
goslim_goa:
GO:0050877
protein_id:
AAH24842.2
protein_id:
AAH58269.1
protein_id:
ABG77269.1
protein_id:
ABG77270.1
protein_id:
BAE93688.1
OTTP:
OTTMUSP00000027765
OTTT:
OTTMUST00000057552
Reactome:
R-MMU-212436
Reactome:
R-MMU-383280
Reactome:
R-MMU-74160
UniParc:
UPI00003A934A
definition
note
: transcript_id=ENSMUST00000112832
protein_id
: ENSMUSP00000108451
translation
: MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALARVYSSSISNGLSNLNTETGGTYANGHVIDLPKSEGYYSIDSGQPSPDQSGLDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCAAVCK
name
type
misc_feature
link
xref
definition
note
: contig AC103645.6 99196..209224(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
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JF1v3 :
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show
KJRv1 :
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show
SWNv1 :
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show
CHDv1 :
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show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.