VariantTable
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name
Trpm3 (ENSMUSG00000052387)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Trpm3
note
: transient receptor potential cation channel, subfamily M, member 3 [Source:MGI Symbol;Acc:MGI:2443101]
name
Trpm3 (ENSMUSG00000052387)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000099569
name
Trpm3 (ENSMUSG00000052387)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000087576
name
Trpm3 (ENSMUSG00000052387)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000074770
name
Trpm3 (ENSMUSG00000052387)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000037901
name
Trpm3 (ENSMUSG00000052387)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS29702.1
RefSeq_peptide:
NP_001030316
RefSeq_peptide:
NP_001030319.1
RefSeq_mRNA:
NM_001035239.2
RefSeq_mRNA:
NM_001035242.1
RefSeq_mRNA_predicted:
XM_006526969.2
RefSeq_peptide_predicted:
XP_006527032.1
Uniprot/SPTREMBL:
Q5F4T0
UCSC:uc008gzm.1
EMBL:
AC123066
EMBL:
AC124513
EMBL:
AC132389
EMBL:
AC132454
EMBL:
AC140411
EMBL:
AC164427
EMBL:
AJ544532
GO:
GO:0005227
GO:
GO:0005261
GO:
GO:0006812
GO:
GO:0016021
GO:
GO:0016048
GO:
GO:0050951
GO:
GO:0098655
MGI_trans_name:
Trpm3-206
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0022857
goslim_goa:
GO:0050877
goslim_goa:
GO:0055085
protein_id:
CAD67492.1
Reactome:
R-MMU-2672351
Reactome:
R-MMU-3295583
Reactome:
R-MMU-382551
Reactome:
R-MMU-983712
UniParc:
UPI00004CCFDA
definition
note
: transcript_id=ENSMUST00000099569
protein_id
: ENSMUSP00000097164
translation
: MGKKWRDAGELERGCSDREDSAESRRRSRSASRGRFAESWKRLSSKQGSTKRSGLPAQQTPAQKSWIERAFYKRECVHIIPSTKDPHRCCCGRLIGQHVGLTPSISVLQNEKNESRLSRNDIQSEKWSISKHTQLSPTDAFGTIEFQGGGHSNKAMYVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQTMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVALIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDILAFGHKYSEEGGLINESLRDQLLVTIQKTFTYTRTQAQHLFIILMECMKKKELITVFRMGSEGHQDIDLAILTALLKGANASAPDQLSLALAWNRVDIARSQIFIYGQQWPVGSLEQAMLDALVLDRVDFVKLLIENGVSMHRFLTISRLEELYNTRHGPSNTLYHLVRDVKKGNLPPDYRISLIDIGLVIEYLMGGAYRCNYTRKRFRTLYHNLFGPKRPKALKLLGMEDDIPLRRGRKTTKKREEEVDIDLDDPEINHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHEASENDMVDDISQELNHNSRDFGQLAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNSGLKVILGILLPPSILSLEFKNKDDMPYMTQAQEIHLQEKEPEEPEKPTKEKDEEDMELTAMLGRSNGESSRKKDEEEVQSRHRLIPVGRKIYEFYNAPIVKFWFYTLAYIGYLMLFNYIVLVKMERWPSTQEWIVISYIFTLGIEKMREILMSEPGKLLQKVKVWLQEYWNVTDLIAILLFSVGMILRLQDQPFRSDGRVIYCVNIIYWYIRLLDIFGVNKYLGPYVMMIGKMMIDMMYFVIIMLVVLMSFGVARQAILFPNEEPSWKLAKNIFYMPYWMIYGEVFADQIDRKQVYDSHTPKSAPCGQNETREDGKTIQLPPCKTGAWIVPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHERPVLPPPLIIFSHMTMIFQHVCCRWRKHESDQDERDYGLKLFITDDELKKVHDFEEQCIEEYFREKDDRFNSSNDERIRVTSERVENMSMRLEEVNEREHSMKASLQTVDIRLAQLEDLIGRMATALERLTGLERAESNKIRSRTSSDCTDAAYIVRQSSFNSQEGNTFKLQESIDPAGEETISPTSPTLMPRMRSHSFYSVNVKDKGGIEKLESIFKERSLSLHRATSSHSVAKEPKAPAAPANTLAIVPDSRRPSSCIDIYVSAMDELHCDIEPLDNSMNILGLGEPSFSALAPSTTPSSSAYATLAPTDRPPSRSIDFEDLTSMDTRSFSSDYTHLPECQNPWDTDPPTYHTIERSKSSRYLATTPFLLEEAPIVKSHSFMFSPSRSYYANFGVPVKTAEYTSITDCIDTRCVNAPQAIADRATFPGGLGDKVEDLSCCHPEREAELSHPSSDSEENEARGQRAANPISSQEAENADRTLSNNITVPKIERANSYSAEEPNVPYAHTRKSFSISDKLDRQRNTASLRNPFQRSKSSKPEGRGDSLSMRRLSRTSAFHSFESKHN
name
Trpm3 (ENSMUSG00000052387)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS29703.1
RefSeq_peptide:
NP_001030317
RefSeq_mRNA:
NM_001035240.2
RefSeq_mRNA_predicted:
XM_006526968.2
RefSeq_peptide_predicted:
XP_006527026.1
RefSeq_peptide_predicted:
XP_006527028.1
RefSeq_peptide_predicted:
XP_006527031.1
RefSeq_peptide_predicted:
XP_006527035.1
RefSeq_peptide_predicted:
XP_006527041.1
RefSeq_peptide_predicted:
XP_011245533.1
RefSeq_peptide_predicted:
XP_011245534.1
Uniprot/SPTREMBL:
Q5F4S9
UCSC:uc008gzj.1
EMBL:
AC123066
EMBL:
AC124513
EMBL:
AC132389
EMBL:
AC132454
EMBL:
AC140411
EMBL:
AC164427
EMBL:
AJ544533
GO:
GO:0005227
GO:
GO:0005261
GO:
GO:0005261
GO:
GO:0006812
GO:
GO:0006812
GO:
GO:0016021
GO:
GO:0016048
GO:
GO:0050951
GO:
GO:0098655
MGI_trans_name:
Trpm3-203
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0022857
goslim_goa:
GO:0050877
goslim_goa:
GO:0055085
protein_id:
CAD67493.1
Reactome:
R-MMU-2672351
Reactome:
R-MMU-3295583
Reactome:
R-MMU-382551
Reactome:
R-MMU-983712
UniParc:
UPI00004CCFDB
definition
note
: transcript_id=ENSMUST00000087576
protein_id
: ENSMUSP00000084857
translation
: MGKKWRDAGELERGCSDREDSAESRRRSRSASRGRFAESWKRLSSKQGSTKRSGLPAQQTPAQKSWIERAFYKRECVHIIPSTKDPHRCCCGRLIGQHVGLTPSISVLQNEKNESRLSRNDIQSEKWSISKHTQLSPTDAFGTIEFQGGGHSNKAMYVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQTMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVALIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDILAFGHKYSEEGGLINESLRDQLLVTIQKTFTYTRTQAQHLFIILMECMKKKELITVFRMGSEGHQDIDLAILTALLKGANASAPDQLSLALAWNRVDIARSQIFIYGQQWPVGSLEQAMLDALVLDRVDFVKLLIENGVSMHRFLTISRLEELYNTRHGPSNTLYHLVRDVKKREYPGFGWIYFKGNLPPDYRISLIDIGLVIEYLMGGAYRCNYTRKRFRTLYHNLFGPKRPKALKLLGMEDDIPLRRGRKTTKKREEEVDIDLDDPEINHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHEASENDMVDDISQELNHNSRDFGQLAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNSGLKVILGILLPPSILSLEFKNKDDMPYMTQAQEIHLQEKEPEEPEKPTKEKDEEDMELTAMLGRSNGESSRKKDEEEVQSRHRLIPVGRKIYEFYNAPIVKFWFYTLAYIGYLMLFNYIVLVKMERWPSTQEWIVISYIFTLGIEKMREILMSEPGKLLQKVKVWLQEYWNVTDLIAILLFSVGMILRLQDQPFRSDGRVIYCVNIIYWYIRLLDIFGVNKYLGPYVMMIGKMMIDMMYFVIIMLVVLMSFGVARQAILFPNEEPSWKLAKNIFYMPYWMIYGEVFADQIDPPCGQNETREDGKTIQLPPCKTGAWIVPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHERPVLPPPLIIFSHMTMIFQHVCCRWRKHESDQDERDYGLKLFITDDELKKVHDFEEQCIEEYFREKDDRFNSSNDERIRVTSERVENMSMRLEEVNEREHSMKASLQTVDIRLAQLEDLIGRMATALERLTGLERAESNKIRSRTSSDCTDAAYIVRQSSFNSQEGNTFKLQESIDPAGEETISPTSPTLMPRMRSHSFYSVNVKDKGGIEKLESIFKERSLSLHRATSSHSVAKEPKAPAAPANTLAIVPDSRRPSSCIDIYVSAMDELHCDIEPLDNSMNILGLGEPSFSALAPSTTPSSSAYATLAPTDRPPSRSIDFEDLTSMDTRSFSSDYTHLPECQNPWDTDPPTYHTIERSKSSRYLATTPFLLEEAPIVKSHSFMFSPSRSYYANFGVPVKTAEYTSITDCIDTRCVNAPQAIADRATFPGGLGDKVEDLSCCHPEREAELSHPSSDSEENEARGQRAANPISSQEAENADRTLSNNITVPKIERANSYSAEEPNVPYAHTRKSFSISDKLDRQRNTASLRNPFQRSKSSKPEGRGDSLSMRRLSRTSAFHSFESKHN
name
Trpm3 (ENSMUSG00000052387)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS29704.1
RefSeq_peptide:
NP_001030318
RefSeq_peptide:
NP_001030320.1
RefSeq_mRNA:
NM_001035241.2
RefSeq_mRNA:
NM_001035243.2
RefSeq_mRNA_predicted:
XM_006526971.1
RefSeq_peptide_predicted:
XP_006527034.1
RefSeq_peptide_predicted:
XP_006527037.1
RefSeq_peptide_predicted:
XP_011245532.1
Uniprot/SPTREMBL:
Q5F4S8
UCSC:uc008gzl.1
EMBL:
AC123066
EMBL:
AC124513
EMBL:
AC132389
EMBL:
AC132454
EMBL:
AC140411
EMBL:
AC164427
EMBL:
AJ544534
GO:
GO:0005227
GO:
GO:0005261
GO:
GO:0006812
GO:
GO:0016021
GO:
GO:0016048
GO:
GO:0050951
GO:
GO:0098655
MGI_trans_name:
Trpm3-202
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0022857
goslim_goa:
GO:0050877
goslim_goa:
GO:0055085
protein_id:
CAD67494.1
Reactome:
R-MMU-2672351
Reactome:
R-MMU-3295583
Reactome:
R-MMU-382551
Reactome:
R-MMU-983712
UniParc:
UPI00004CCFDC
definition
note
: transcript_id=ENSMUST00000074770
protein_id
: ENSMUSP00000074328
translation
: MGKKWRDAGELERGCSDREDSAESRRRSRSASRGRFAESWKRLSSKQGSTKRSGLPAQQTPAQKSWIERAFYKRECVHIIPSTKDPHRCCCGRLIGQHVGLTPSISVLQNEKNESRLSRNDIQSEKWSISKHTQLSPTDAFGTIEFQGGGHSNKAMYVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQTMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVALIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDILAFGHKYSEEGGLINESLRDQLLVTIQKTFTYTRTQAQHLFIILMECMKKKELITVFRMGSEGHQDIDLAILTALLKGANASAPDQLSLALAWNRVDIARSQIFIYGQQWPVGSLEQAMLDALVLDRVDFVKLLIENGVSMHRFLTISRLEELYNTRHGPSNTLYHLVRDVKKREYPGFGWIYFKGNLPPDYRISLIDIGLVIEYLMGGAYRCNYTRKRFRTLYHNLFGPKRDDIPLRRGRKTTKKREEEVDIDLDDPEINHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHEASENDMVDDISQELNHNSRDFGQLAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNSGLKVILGILLPPSILSLEFKNKDDMPYMTQAQEIHLQEKEPEEPEKPTKEKDEEDMELTAMLGRSNGESSRKKDEEEVQSRHRLIPVGRKIYEFYNAPIVKFWFYTLAYIGYLMLFNYIVLVKMERWPSTQEWIVISYIFTLGIEKMREILMSEPGKLLQKVKVWLQEYWNVTDLIAILLFSVGMILRLQDQPFRSDGRVIYCVNIIYWYIRLLDIFGVNKYLGPYVMMIGKMMIDMMYFVIIMLVVLMSFGVARQAILFPNEEPSWKLAKNIFYMPYWMIYGEVFADQIDPPCGQNETREDGKTIQLPPCKTGAWIVPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHERPVLPPPLIIFSHMTMIFQHVCCRWRKHESDQDERDYGLKLFITDDELKKVHDFEEQCIEEYFREKDDRFNSSNDERIRVTSERVENMSMRLEEVNEREHSMKASLQTVDIRLAQLEDLIGRMATALERLTGLERAESNKIRSRTSSDCTDAAYIVRQSSFNSQEGNTFKLQESIDPAGEETISPTSPTLMPRMRSHSFYSVNVKDKGGIEKLESIFKERSLSLHRATSSHSVAKEPKAPAAPANTLAIVPDSRRPSSCIDIYVSAMDELHCDIEPLDNSMNILGLGEPSFSALAPSTTPSSSAYATLAPTDRPPSRSIDFEDLTSMDTRSFSSDYTHLPECQNPWDTDPPTYHTIERSKSSRYLATTPFLLEEAPIVKSHSFMFSPSRSYYANFGVPVKTAEYTSITDCIDTRCVNAPQAIADRATFPGGLGDKVEDLSCCHPEREAELSHPSSDSEENEARGQRAANPISSQEAENADRTLSNNITVPKIERANSYSAEEPNVPYAHTRKSFSISDKLDRQRNTASLRNPFQRSKSSKPEGRGDSLSMRRLSRTSAFHSFESKHN
name
Trpm3 (ENSMUSG00000052387)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS29705.1
RefSeq_peptide:
NP_796315
RefSeq_mRNA:
NM_177341.4
Uniprot/SPTREMBL:
B2RUS0
UCSC:uc008gzo.1
EMBL:
AC123066
EMBL:
AC124513
EMBL:
AC132389
EMBL:
AC132454
EMBL:
AC140411
EMBL:
AC164427
EMBL:
BC141400
EMBL:
BC141412
GO:
GO:0005227
GO:
GO:0005261
GO:
GO:0006812
GO:
GO:0016021
GO:
GO:0016048
GO:
GO:0050951
GO:
GO:0098655
MGI_trans_name:
Trpm3-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0022857
goslim_goa:
GO:0050877
goslim_goa:
GO:0055085
protein_id:
AAI41401.1
protein_id:
AAI41413.1
Reactome:
R-MMU-2672351
Reactome:
R-MMU-3295583
Reactome:
R-MMU-382551
Reactome:
R-MMU-983712
UniParc:
UPI000044FEA4
definition
note
: transcript_id=ENSMUST00000037901
protein_id
: ENSMUSP00000042184
translation
: MPGPWGTVYFLGTAQICSFLSSRWNLEGVMNQTDASRPLNWTIRKLCHAAFLPSVRLLKAQKSWIERAFYKRECVHIIPSTKDPHRCCCGRLIGQHVGLTPSISVLQNEKNESRLSRNDIQSEKWSISKHTQLSPTDAFGTIEFQGGGHSNKAMYVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQTMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVALIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDILAFGHKYSEEGGLINESLRDQLLVTIQKTFTYTRTQAQHLFIILMECMKKKELITVFRMGSEGHQDIDLAILTALLKGANASAPDQLSLALAWNRVDIARSQIFIYGQQWPVGSLEQAMLDALVLDRVDFVKLLIENGVSMHRFLTISRLEELYNTRHGPSNTLYHLVRDVKKREYPGFGWIYFKGNLPPDYRISLIDIGLVIEYLMGGAYRCNYTRKRFRTLYHNLFGPKRPKALKLLGMEDDIPLRRGRKTTKKREEEVDIDLDDPEINHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHEASENDMVDDISQELNHNSRDFGQLAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNSGLKVILGILLPPSILSLEFKNKDDMPYMTQAQEIHLQEKEPEEPEKPTKEKDEEDMELTAMLGRSNGESSRKKDEEEVQSRHRLIPVGRKIYEFYNAPIVKFWFYTLAYIGYLMLFNYIVLVKMERWPSTQEWIVISYIFTLGIEKMREILMSEPGKLLQKVKVWLQEYWNVTDLIAILLFSVGMILRLQDQPFRSDGRVIYCVNIIYWYIRLLDIFGVNKYLGPYVMMIGKMMIDMMYFVIIMLVVLMSFGVARQAILFPNEEPSWKLAKNIFYMPYWMIYGEVFADQIDPPCGQNETREDGKTIQLPPCKTGAWIVPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHERPVLPPPLIIFSHMTMIFQHVCCRWRKHESDQDERDYGLKLFITDDELKKVHDFEEQCIEEYFREKDDRFNSSNDERIRVTSERVENMSMRLEEVNEREHSMKASLQTVDIRLAQLEDLIGRMATALERLTGLERAESNKIRSRTSSDCTDAAYIVRQSSFNSQEGNTFKLQESIDPAEHPFYSV
name
type
misc_feature
link
xref
definition
note
: contig AC123066.4 1..177545(-1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.