VariantTable
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name
Smarca2 (ENSMUSG00000024921)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Smarca2
note
: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:MGI Symbol;Acc:MGI:99603]
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000025862
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000176030
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000099537
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000176769
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000175791
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000176698
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000177252
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000176475
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000112637
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000175842
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000175953
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000176731
name
Smarca2 (ENSMUSG00000024921)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000177116
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS29720.1
RefSeq_peptide:
NP_035546
RefSeq_mRNA:
NM_011416.2
RefSeq_mRNA_predicted:
XM_006527285
RefSeq_peptide_predicted:
XP_006527348.1
Vega_transcript:
OTTMUST00000104062
Vega_transcript:
Smarca2-001
Uniprot/SPTREMBL:
F2Z4A9
UCSC:uc008hbn.1
EMBL:
AC118249
EMBL:
AC118472
GO:
GO:0000790
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0001105
GO:
GO:0003682
GO:
GO:0005515
GO:
GO:0005524
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0007286
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0042393
GO:
GO:0043231
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-001
Vega_translation:
222477
Vega_translation:
OTTMUSP00000058197
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0042393
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000058197
OTTT:
OTTMUST00000104062
UniParc:
UPI000042B0CA
definition
note
: transcript_id=ENSMUST00000025862
protein_id
: ENSMUSP00000025862
translation
: MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_mRNA_predicted:
XM_006527281.2
RefSeq_mRNA_predicted:
XM_006527282.2
RefSeq_mRNA_predicted:
XM_006527283.2
RefSeq_mRNA_predicted:
XM_006527284.2
RefSeq_mRNA_predicted:
XM_006527286.1
RefSeq_peptide_predicted:
XP_006527344.1
RefSeq_peptide_predicted:
XP_006527345.1
RefSeq_peptide_predicted:
XP_006527346.1
RefSeq_peptide_predicted:
XP_006527347.1
RefSeq_peptide_predicted:
XP_006527349.1
Vega_transcript:
OTTMUST00000104061
Vega_transcript:
Smarca2-003
Uniprot/SPTREMBL:
H3BLH0
UCSC:uc008hbn.1
EMBL:
AC118249
EMBL:
AC118472
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0005515
GO:
GO:0005524
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0042393
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-003
Vega_translation:
222478
Vega_translation:
OTTMUSP00000058196
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0042393
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000058196
OTTT:
OTTMUST00000104061
UniParc:
UPI00024675E9
definition
note
: transcript_id=ENSMUST00000176030
protein_id
: ENSMUSP00000135784
translation
: MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000104063
Vega_transcript:
Smarca2-002
Uniprot/SPTREMBL:
E9QAB8
UCSC:uc008hbn.1
EMBL:
AC118249
EMBL:
AC118472
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0005515
GO:
GO:0005524
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0042393
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-002
Vega_translation:
222479
Vega_translation:
OTTMUSP00000058198
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0042393
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000058198
OTTT:
OTTMUST00000104063
UniParc:
UPI0000D8ACEB
definition
note
: transcript_id=ENSMUST00000099537
protein_id
: ENSMUSP00000097135
translation
: MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNRSESVIISIGAWETWRKTSCFSVTTHRHSTWKDPRSTKTPLSYSQCLRVLGRKLPKKKRVRKKAMKKRKKMMKRSRSQRRNL
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000104064
Vega_transcript:
Smarca2-005
Uniprot/SPTREMBL:
H3BJK2
UCSC:uc008hbn.1
EMBL:
AC118249
EMBL:
AC118472
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0005515
GO:
GO:0005524
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0042393
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-005
Vega_translation:
222480
Vega_translation:
OTTMUSP00000058199
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0042393
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000058199
OTTT:
OTTMUST00000104064
UniParc:
UPI00024675EB
definition
note
: transcript_id=ENSMUST00000176769
protein_id
: ENSMUSP00000135017
translation
: MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000104079
Vega_transcript:
Smarca2-010
Uniprot/SPTREMBL:
H3BKJ3
UCSC:uc008hbr.1
EMBL:
AC118249
EMBL:
AC118472
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-010
Vega_translation:
222482
Vega_translation:
OTTMUSP00000058207
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000058207
OTTT:
OTTMUST00000104079
UniParc:
UPI00024675ED
definition
note
: transcript_id=ENSMUST00000175791
protein_id
: ENSMUSP00000135412
translation
: MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000104073
Vega_transcript:
Smarca2-011
Uniprot/SPTREMBL:
H3BKJ3
UCSC:uc008hbr.1
EMBL:
AC118249
EMBL:
AC118472
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-011
Vega_translation:
222483
Vega_translation:
OTTMUSP00000058204
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000058204
OTTT:
OTTMUST00000104073
UniParc:
UPI00024675ED
definition
note
: transcript_id=ENSMUST00000176698
protein_id
: ENSMUSP00000134914
translation
: MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000104080
Vega_transcript:
Smarca2-016
Uniprot/SPTREMBL:
H3BJI1
UCSC:uc008hbr.1
EMBL:
AC118249
EMBL:
AC118472
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-016
Vega_translation:
222484
Vega_translation:
OTTMUSP00000058208
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000058208
OTTT:
OTTMUST00000104080
UniParc:
UPI00024675EE
definition
note
: transcript_id=ENSMUST00000177252
protein_id
: ENSMUSP00000134995
translation
: MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEE
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_peptide_predicted:
XP_006527351.1
RefSeq_peptide_predicted:
XP_006527352.1
Vega_transcript:
OTTMUST00000104074
Vega_transcript:
Smarca2-009
Uniprot/SPTREMBL:
H3BK47
UCSC:uc008hbr.1
EMBL:
AC118249
EMBL:
AC118472
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-009
Vega_translation:
222485
Vega_translation:
OTTMUSP00000058205
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000058205
OTTT:
OTTMUST00000104074
UniParc:
UPI00001ECDC7
definition
note
: transcript_id=ENSMUST00000176475
protein_id
: ENSMUSP00000135248
translation
: MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS37945.1
RefSeq_peptide:
NP_080279
RefSeq_mRNA:
NM_026003.2
RefSeq_mRNA_predicted:
XM_006527290
RefSeq_mRNA_predicted:
XM_006527291
RefSeq_peptide_predicted:
XP_006527354.1
Vega_transcript:
OTTMUST00000104066
Vega_transcript:
Smarca2-007
Uniprot/SPTREMBL:
Q9D007
UCSC:uc008hbr.1
Fantom:
2610209L14
EMBL:
AC118249
EMBL:
AC118472
EMBL:
AK011935
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-007
Vega_translation:
222486
Vega_translation:
OTTMUSP00000058200
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
protein_id:
BAB27925.1
OTTP:
OTTMUSP00000058200
OTTT:
OTTMUST00000104066
UniParc:
UPI00000224A2
definition
note
: transcript_id=ENSMUST00000112637
protein_id
: ENSMUSP00000108256
translation
: MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000104081
Vega_transcript:
Smarca2-015
Uniprot/SPTREMBL:
H3BLI4
EMBL:
AC118249
EMBL:
AC118472
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-015
Vega_translation:
222487
Vega_translation:
OTTMUSP00000058209
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000058209
OTTT:
OTTMUST00000104081
UniParc:
UPI00024675EF
definition
note
: transcript_id=ENSMUST00000175842
protein_id
: ENSMUSP00000135800
translation
: MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESE
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000104082
Vega_transcript:
Smarca2-017
Uniprot/SPTREMBL:
H3BJM2
EMBL:
AC118249
EMBL:
AC118472
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-017
Vega_translation:
222488
Vega_translation:
OTTMUSP00000058210
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000058210
OTTT:
OTTMUST00000104082
UniParc:
UPI00024675F0
definition
note
: transcript_id=ENSMUST00000175953
protein_id
: ENSMUSP00000135042
translation
: MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLP
name
Smarca2 (ENSMUSG00000024921)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000104067
Vega_transcript:
Smarca2-006
Uniprot/SPTREMBL:
H3BKN5
UCSC:uc008hbr.1
EMBL:
AC118249
EMBL:
AC118472
GO:
GO:0000790
GO:
GO:0001105
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0006325
GO:
GO:0006334
GO:
GO:0006338
GO:
GO:0008152
GO:
GO:0008285
GO:
GO:0016514
GO:
GO:0016887
GO:
GO:0030308
GO:
GO:0035887
GO:
GO:0043231
GO:
GO:0044212
GO:
GO:0045111
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0071564
GO:
GO:0071565
GO:
GO:0090544
MGI_trans_name:
Smarca2-006
Vega_translation:
222489
Vega_translation:
OTTMUSP00000058201
goslim_goa:
GO:0000228
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0005856
goslim_goa:
GO:0006461
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000058201
OTTT:
OTTMUST00000104067
UniParc:
UPI00024675F1
definition
note
: transcript_id=ENSMUST00000176731
protein_id
: ENSMUSP00000135460
translation
: GRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRSESVIISIGAWETWRKTSCFSVTTHRHSTWKDPRSTKTPLSYSQCLRVLGRKLPKKKRVRKKAMKKRKKMMKRSRSQRRNL
name
type
misc_feature
link
xref
definition
note
: contig AC118472.8 1..207146(-1)
name
Smarca2 (ENSMUSG00000024921)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000104078
Vega_transcript:
OTTMUST00000104078
MGI_trans_name:
Smarca2-019
OTTT:
OTTMUST00000104078
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000176700
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
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14
15
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19
X
(Build: mm10)
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
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JF1v3 :
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KJRv1 :
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SWNv1 :
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CHDv1 :
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NJLv1 :
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show
BLG2v1 :
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show
HMIv1 :
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show
BFMv1 :
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show
PGNv1 :
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Click to browse alignment view.
BAC clone ordering.