VariantTable
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name
Igsf3 (ENSMUSG00000042035)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Igsf3
note
: immunoglobulin superfamily, member 3 [Source:MGI Symbol;Acc:MGI:1926158]
name
Igsf3 (ENSMUSG00000042035)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000043983
name
Igsf3 (ENSMUSG00000042035)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000195164
name
Igsf3 (ENSMUSG00000042035)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17682.1
Uniprot/SWISSPROT:
Q6ZQA6
RefSeq_peptide:
NP_997088
RefSeq_mRNA:
NM_207205.2
Vega_transcript:
Igsf3-001
Vega_transcript:
OTTMUST00000131171
UCSC:uc008qrg.2
Fantom:
D430026G15
EMBL:
AK052454
EMBL:
AK129151
EMBL:
BC052892
GO:
GO:0003674
GO:
GO:0009986
GO:
GO:0009986
GO:
GO:0016021
GO:
GO:0032808
GO:
GO:0032808
MGI_trans_name:
Igsf3-001
Vega_translation:
188309
Vega_translation:
OTTMUSP00000070200
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005623
goslim_goa:
GO:0008150
goslim_goa:
GO:0048856
protein_id:
AAH52892.1
protein_id:
BAC35000.1
protein_id:
BAC97961.1
OTTP:
OTTMUSP00000070200
OTTT:
OTTMUST00000131171
UniParc:
UPI00001C2D24
definition
note
: transcript_id=ENSMUST00000043983
protein_id
: ENSMUSP00000048900
translation
: MKCFFPVLSCLAVLGVVSAQRQVTVQEGPLYRTESSHITIWCNVSGYQGPSEQNFQWSIYLPSAPEREVQIVSTVDSSFPYAIYTQRVRGGKIYVERIQGNSALLHITDLQARDAGEYECHTPNTDERYFGSYSAKMNLVVIPDSLQTTAVPQTLHKVEQDPLELSCEVATETVQHTHLSVSWLRQKGGENPVEVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRSTFRLTIFHLQPSDQGEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETDKRLHTVGEPVEFRCILEAQNIPDRYFAVSWAFNSSLIATMGPNAVPVLNSDFAHREAKGQLKVAKESDGVFVLKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIVVLPLKSSISVEVASNASVVLEGEDLHFSCTVRTVGRLQARFSVIWQLVDRQNRRSNVMWLDRDGTLQPGSAYWERSSYGGIQMEQVQPNSFSLGIFNSRKEDEGQYECHVTEWVRAVDGEWQIVGERRASTLVSITALETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSVTWRFQPVGTVEFHDLVTFTRDGGVQWGDKSSTFRTRTAIEKAESSNNVRLSISRASDTEAGKYQCVAELWRRNYNNTWTRLAERTSNLLEIRVLQPVTKLQVSKSKRTLTLVENRAIQLNCSVKSQTSPNSHFAVLWYVHKPSDADGKLILKTTHSSAFEYGTYAEEEGLRGRLQFERHVSGGLFSLTVQRAEVSDSGSYYCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLKLSQVQGSLSVLETRQIQLECVVLNRTSVASQLLVEWFVWKPNHPEREVVAHLSRDATFHYGEQAAKNNLKGRLHAESPSSGVYRLFIQNVAVQDSGTYSCRVEEWLPSPSGVWYKRAEDTAGQTAVTVMRPDAALQVDTVVPNATVTEKAAFQLDCSILSRSSQDSRFAVAWYSLRTKGGGKRGSLGIDEQEEEEEEEDISQEEDSEDPTERTVLLSVGPDAVFGPEGSPWEGRLRFQRLSPLLYRLTVLEASPQDTGNYSCHVEEWLPSPQKEWYRLTEEESAPIGIRVLDTSSTLQSLICSNDALFYFVFFYPFPIFGILIITILLVRFKSRNSSKNSEGKNGVPLLWIKEPHLNYSPTCLEPPVLSIHPGAID
name
Igsf3 (ENSMUSG00000042035)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_peptide_predicted:
XP_006502405.1
RefSeq_peptide_predicted:
XP_006502406.1
RefSeq_peptide_predicted:
XP_011238589.1
Vega_transcript:
Igsf3-002
Vega_transcript:
OTTMUST00000131172
Uniprot/SPTREMBL:
A0A0A6YX40
UCSC:uc008qrg.2
EMBL:
AC131184
GO:
GO:0003674
GO:
GO:0009986
GO:
GO:0032808
MGI_trans_name:
Igsf3-002
Vega_translation:
188310
Vega_translation:
OTTMUSP00000070201
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005623
goslim_goa:
GO:0008150
goslim_goa:
GO:0048856
OTTP:
OTTMUSP00000070201
OTTT:
OTTMUST00000131172
UniParc:
UPI0003D71D66
definition
note
: transcript_id=ENSMUST00000195164
protein_id
: ENSMUSP00000141823
translation
: MKCFFPVLSCLAVLGVVSAQRQVTVQEGPLYRTESSHITIWCNVSGYQGPSEQNFQWSIYLPSAPEREVQIVSTVDSSFPYAIYTQRVRGGKIYVERIQGNSALLHITDLQARDAGEYECHTPNTDERYFGSYSAKMNLVVIPDSLQTTAVPQTLHKVEQDPLELSCEVATETVQHTHLSVSWLRQKGGENPVEVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRSTFRLTIFHLQPSDQGEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETDKRLHTVGEPVEFRCILEAQNIPDRYFAVSWAFNSSLIATMGPNAVPVLNSDFAHREAKGQLKVAKESDGVFVLKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIVVLPLTDNWVVKVPQQHQILPQGHLESSISVEVASNASVVLEGEDLHFSCTVRTVGRLQARFSVIWQLVDRQNRRSNVMWLDRDGTLQPGSAYWERSSYGGIQMEQVQPNSFSLGIFNSRKEDEGQYECHVTEWVRAVDGEWQIVGERRASTLVSITALETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSVTWRFQPVGTVEFHDLVTFTRDGGVQWGDKSSTFRTRTAIEKAESSNNVRLSISRASDTEAGKYQCVAELWRRNYNNTWTRLAERTSNLLEIRVLQPVTKLQVSKSKRTLTLVENRAIQLNCSVKSQTSPNSHFAVLWYVHKPSDADGKLILKTTHSSAFEYGTYAEEEGLRGRLQFERHVSGGLFSLTVQRAEVSDSGSYYCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLKLSQVQGSLSVLETRQIQLECVVLNRTSVASQLLVEWFVWKPNHPEREVVAHLSRDATFHYGEQAAKNNLKGRLHAESPSSGVYRLFIQNVAVQDSGTYSCRVEEWLPSPSGVWYKRAEDTAGQTAVTVMRPDAALQVDTVVPNATVTEKAAFQLDCSILSRSSQDSRFAVAWYSLRTKGGGKRGSLGIDEQEEEEEEEDISQEEDSEDPTERTVLLSVGPDAVFGPEGSPWEGRLRFQRLSPLLYRLTVLEASPQDTGNYSCHVEEWLPSPQKEWYRLTEEESAPIGIRVLDTSSTLQSLICSNDALFYFVFFYPFPIFGILIITILLVRFKSRNSSKNSEGKNGVPLLWIKEPHLNYSPTCLEPPVLSIHPGAID
name
type
misc_feature
link
xref
definition
note
: contig AC131184.4 1..190892(-1)
name
Igsf3 (ENSMUSG00000042035)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000135070
Vega_transcript:
OTTMUST00000135070
MGI_trans_name:
Igsf3-003
OTTT:
OTTMUST00000135070
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000198995
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
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JF1v3 :
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show
KJRv1 :
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SWNv1 :
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show
CHDv1 :
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show
NJLv1 :
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show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.