VariantTable
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name
Atp1a1 (ENSMUSG00000033161)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Atp1a1
note
: ATPase, Na+/K+ transporting, alpha 1 polypeptide [Source:MGI Symbol;Acc:MGI:88105]
name
RP23-103P11.1 (ENSMUSG00000104693)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: RP23-103P11.1
name
Atp1a1 (ENSMUSG00000033161)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000036493
name
Atp1a1 (ENSMUSG00000033161)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17683.1
Uniprot/SWISSPROT:
Q8VDN2
RefSeq_peptide:
NP_659149
RefSeq_mRNA:
NM_144900.2
Vega_transcript:
Atp1a1-001
Vega_transcript:
OTTMUST00000039619
UCSC:uc008qrj.2
EMBL:
BC010319
EMBL:
BC021496
EMBL:
BC023794
EMBL:
BC025618
EMBL:
BC025627
EMBL:
BC025811
EMBL:
BC032187
EMBL:
BC033435
EMBL:
BC033471
EMBL:
BC042435
GO:
GO:0002026
GO:
GO:0002028
GO:
GO:0002028
GO:
GO:0005391
GO:
GO:0005391
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005524
GO:
GO:0005768
GO:
GO:0005783
GO:
GO:0005794
GO:
GO:0005886
GO:
GO:0005886
GO:
GO:0005886
GO:
GO:0005890
GO:
GO:0005890
GO:
GO:0005890
GO:
GO:0005901
GO:
GO:0006470
GO:
GO:0006813
GO:
GO:0006814
GO:
GO:0006883
GO:
GO:0006883
GO:
GO:0008217
GO:
GO:0010107
GO:
GO:0010107
GO:
GO:0010107
GO:
GO:0014704
GO:
GO:0016020
GO:
GO:0016020
GO:
GO:0016021
GO:
GO:0016323
GO:
GO:0016324
GO:
GO:0016791
GO:
GO:0019901
GO:
GO:0019904
GO:
GO:0030007
GO:
GO:0030007
GO:
GO:0030315
GO:
GO:0030315
GO:
GO:0030506
GO:
GO:0030955
GO:
GO:0031402
GO:
GO:0031947
GO:
GO:0036376
GO:
GO:0036376
GO:
GO:0036376
GO:
GO:0042383
GO:
GO:0042383
GO:
GO:0042470
GO:
GO:0042493
GO:
GO:0043209
GO:
GO:0043234
GO:
GO:0043234
GO:
GO:0043531
GO:
GO:0043548
GO:
GO:0045121
GO:
GO:0045822
GO:
GO:0045823
GO:
GO:0045989
GO:
GO:0051087
GO:
GO:0051087
GO:
GO:0051087
GO:
GO:0060081
GO:
GO:0070062
GO:
GO:0070062
GO:
GO:0071260
GO:
GO:0071383
GO:
GO:0071383
GO:
GO:0086004
GO:
GO:0086009
GO:
GO:0086009
GO:
GO:0097481
GO:
GO:1903416
GO:
GO:1903561
GO:
GO:1903561
GO:
GO:1990239
GO:
GO:1990239
GO:
GO:1990573
MGI_trans_name:
Atp1a1-001
Vega_translation:
188311
Vega_translation:
OTTMUSP00000017686
goslim_goa:
GO:0003013
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005886
goslim_goa:
GO:0006464
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0008289
goslim_goa:
GO:0016023
goslim_goa:
GO:0016791
goslim_goa:
GO:0016887
goslim_goa:
GO:0022857
goslim_goa:
GO:0042592
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0055085
protein_id:
AAH10319.1
protein_id:
AAH21496.1
protein_id:
AAH23794.1
protein_id:
AAH25618.1
protein_id:
AAH25627.1
protein_id:
AAH25811.1
protein_id:
AAH32187.1
protein_id:
AAH33435.1
protein_id:
AAH33471.1
protein_id:
AAH42435.1
OTTP:
OTTMUSP00000017686
OTTT:
OTTMUST00000039619
Reactome:
R-MMU-382551
Reactome:
R-MMU-936837
Reactome:
R-MMU-983712
UniParc:
UPI0000028BE8
definition
note
: transcript_id=ENSMUST00000036493
protein_id
: ENSMUSP00000039657
translation
: MGKGVGRDKYEPAAVSEHGDKKGKKAKKERDMDELKKEVSMDDHKLSLDELHRKYGTDLSRGLTPARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIRSATEEEPPNDDLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEDVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAEEIEHFIHLITGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWFALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIEVCCGSVMEMREKYSKIVEIPFNSTNKYQLSIHKNPNASEPKHLLVMKGAPERILDRCSSILLHGKEQPLDEELKDAFQNAYLELGGLGERVLGFCHLLLPDEQFPEGFQFDTDDVNFPVDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVNQVNPRDAKACVVHGSDLKDMTSEELDDILRYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIVGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPFHLLGIRETWDDRWVNDVEDSYGQQWTYEQRKIVEFTCHTAFFVSIVVVQWADLVICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGAALRMYPLKPTWWFCAFPYSLLIFVYDEVRKLIIRRRPGGWVEKETYY
name
type
misc_feature
link
xref
definition
note
: contig AC127357.5 87626..220032(1)
name
RP23-103P11.1 (ENSMUSG00000104693)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000135076
Vega_transcript:
OTTMUST00000135076
Clone_based_vega_transcript:RP23-103P11.1-001
OTTT:
OTTMUST00000135076
RNACentral:URS0000811A7A
definition
note
: sense_intronic
note
: transcript_id=ENSMUST00000200347
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.