VariantTable
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name
Casq2 (ENSMUSG00000027861)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Casq2
note
: calsequestrin 2 [Source:MGI Symbol;Acc:MGI:1309469]
name
Casq2 (ENSMUSG00000027861)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000029454
name
Casq2 (ENSMUSG00000027861)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000165540
name
Casq2 (ENSMUSG00000027861)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000164123
name
Casq2 (ENSMUSG00000027861)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS51023.1
Uniprot/SWISSPROT:
O09161
RefSeq_peptide:
NP_033944
RefSeq_mRNA:
NM_009814.3
RefSeq_mRNA_predicted:
XM_006500947.2
RefSeq_peptide_predicted:
XP_006501010.1
Vega_transcript:
Casq2-001
Vega_transcript:
OTTMUST00000077015
UCSC:uc008qrr.3
EMBL:
AF068244
EMBL:
BC092229
EMBL:
BC140959
EMBL:
CH466608
EMBL:
U91483
GO:
GO:0002027
GO:
GO:0002027
GO:
GO:0005080
GO:
GO:0005509
GO:
GO:0005515
GO:
GO:0005622
GO:
GO:0005622
GO:
GO:0005737
GO:
GO:0005737
GO:
GO:0006937
GO:
GO:0010649
GO:
GO:0010649
GO:
GO:0010880
GO:
GO:0010881
GO:
GO:0010881
GO:
GO:0016529
GO:
GO:0016529
GO:
GO:0030018
GO:
GO:0030314
GO:
GO:0033018
GO:
GO:0043267
GO:
GO:0045214
GO:
GO:0048306
GO:
GO:0048306
GO:
GO:0051208
GO:
GO:0051208
GO:
GO:0051258
GO:
GO:0051258
GO:
GO:0060048
GO:
GO:0060048
GO:
GO:0060306
GO:
GO:0060315
GO:
GO:0071313
GO:
GO:0071313
GO:
GO:1901017
MGI_trans_name:
Casq2-001
Vega_translation:
188320
Vega_translation:
OTTMUSP00000040615
goslim_goa:
GO:0003013
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005783
goslim_goa:
GO:0006461
goslim_goa:
GO:0007010
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0022607
goslim_goa:
GO:0030154
goslim_goa:
GO:0042592
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
goslim_goa:
GO:0065003
protein_id:
AAC69472.1
protein_id:
AAC82512.1
protein_id:
AAH92229.1
protein_id:
AAI40960.1
protein_id:
EDL07619.1
OTTP:
OTTMUSP00000040615
OTTT:
OTTMUST00000077015
Reactome:
R-MMU-2672351
Reactome:
R-MMU-382551
Reactome:
R-MMU-983712
UniParc:
UPI000016C840
definition
note
: transcript_id=ENSMUST00000029454
protein_id
: ENSMUSP00000029454
translation
: MKRIYLLMVGVYLLSLSGAEEGLNFPTYDGKDRVVSLSEKNLKQMLKRYDLLCLYYHEPVSSDKVSQKQFQLKEIVLELVAQVLEHKNIGFVMVDSRKEAKLAKRLGFSEEGSLYVLKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIVNNKLEVQAFERIEDQTKLLGFFKNEDSEYYKAFQEAAEHFQPYIKFFATFDKAVAKKLSLKMNEVGFYEPFMDEPNVIPNKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWEDDLNGIHIVAFAEKSDPDGYEFLEILKQVARDNTDNPDLSILWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVTDADSIWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDNEDEDDDGDDNDDDDDDDDDNDNSDEDNEDSDDDDDDDE
name
Casq2 (ENSMUSG00000027861)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Casq2-005
Vega_transcript:
OTTMUST00000092130
Uniprot/SPTREMBL:
F6QYE1
UCSC:uc012cuw.2
EMBL:
AC159255
EMBL:
AC166072
GO:
GO:0002027
GO:
GO:0005509
GO:
GO:0005622
GO:
GO:0005737
GO:
GO:0006937
GO:
GO:0010649
GO:
GO:0010881
GO:
GO:0016529
GO:
GO:0030018
GO:
GO:0048306
GO:
GO:0051208
GO:
GO:0051258
GO:
GO:0060048
GO:
GO:0060315
GO:
GO:0071313
MGI_trans_name:
Casq2-005
Vega_translation:
188321
Vega_translation:
OTTMUSP00000050846
goslim_goa:
GO:0003013
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005783
goslim_goa:
GO:0006461
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0022607
goslim_goa:
GO:0042592
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000050846
OTTT:
OTTMUST00000092130
UniParc:
UPI0001F79088
definition
note
: transcript_id=ENSMUST00000165540
protein_id
: ENSMUSP00000130482
translation
: MKRIYLLMVGVYLLSLSGAEEGLNFPTYDGKDRVVSLSEKNLKQMLKRYDLLCLYYHEPVSSDKVSQKQFQLKEIVLELVAQVLEHKNIGFVMVDSRKEAKLAKRLGFSEEGSLYVLKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIVNNKLEVQAFERIEDQTKLLGFFKNEDSEYYKAFQEAAEHFQPYIKFFATFDKAVAKKLSLKMNEVGFYEPFMDEPNVIPNKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWTTGEDDLNGIHIVAFAEKSDPDGYEFLEILKQVARDNTDNPDLSILWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVTDADSIWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDNEDEDDDGDDNDDDDDDDDDNDNSDEDNEDSDDDDDDDE
name
Casq2 (ENSMUSG00000027861)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Casq2-004
Vega_transcript:
OTTMUST00000092131
Uniprot/SPTREMBL:
E9PZ67
UCSC:uc008qrr.3
EMBL:
AC159255
EMBL:
AC166072
GO:
GO:0002027
GO:
GO:0005509
GO:
GO:0005622
GO:
GO:0005737
GO:
GO:0006937
GO:
GO:0010649
GO:
GO:0010881
GO:
GO:0016529
GO:
GO:0030018
GO:
GO:0048306
GO:
GO:0051208
GO:
GO:0051258
GO:
GO:0060048
GO:
GO:0060315
GO:
GO:0071313
MGI_trans_name:
Casq2-004
Vega_translation:
188322
Vega_translation:
OTTMUSP00000050847
goslim_goa:
GO:0003013
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005783
goslim_goa:
GO:0006461
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0022607
goslim_goa:
GO:0042592
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0065003
OTTP:
OTTMUSP00000050847
OTTT:
OTTMUST00000092131
UniParc:
UPI0001F79089
definition
note
: transcript_id=ENSMUST00000164123
protein_id
: ENSMUSP00000131232
translation
: MKRIYLLMVGVYLLSLSGAEEGLNFPTYDGKDRVVSLSEKNLKQMLKRYDLLCLYYHEPVSSDKVSQKQFQLKEIVLELVAQVLEHKNIGFVMVDSRKEAKLAKRLDYKAFQEAAEHFQPYIKFFATFDKAVAKKLSLKMNEVGFYEPFMDEPNVIPNKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWEDDLNGIHIVAFAEKSDPDGYEFLEILKQVARDNTDNPDLSILWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVTDADSIWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDNEDEDDD
name
type
misc_feature
link
xref
definition
note
: contig AC166072.2 71247..221724(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.