VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Etv3 (ENSMUSG00000003382)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Etv3
note
: ets variant 3 [Source:MGI Symbol;Acc:MGI:1350926]
name
Etv3 (ENSMUSG00000003382)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000119109
name
Etv3 (ENSMUSG00000003382)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000170036
name
Etv3 (ENSMUSG00000003382)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000117293
name
Etv3 (ENSMUSG00000003382)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17453.1
Uniprot/SWISSPROT:
Q8R4Z4
Vega_transcript:
Etv3-001
Vega_transcript:
OTTMUST00000065943
UCSC:uc008psh.2
EMBL:
AC139241
EMBL:
AF156530
EMBL:
AF218539
EMBL:
AY274927
EMBL:
BC078636
EMBL:
CH466547
GO:
GO:0000122
GO:
GO:0000790
GO:
GO:0000977
GO:
GO:0000981
GO:
GO:0001227
GO:
GO:0005515
GO:
GO:0006351
GO:
GO:0008285
GO:
GO:0017053
GO:
GO:0017151
GO:
GO:0030154
GO:
GO:0090571
GO:
GO:0097011
MGI_trans_name:
Etv3-001
Vega_translation:
187465
Vega_translation:
OTTMUSP00000032935
goslim_goa:
GO:0000228
goslim_goa:
GO:0001071
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0019899
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
protein_id:
AAF09185.1
protein_id:
AAH78636.1
protein_id:
AAK56845.1
protein_id:
AAQ18663.1
protein_id:
EDL15354.1
OTTP:
OTTMUSP00000032935
OTTT:
OTTMUST00000065943
UniParc:
UPI0000020D2E
definition
note
: transcript_id=ENSMUST00000119109
protein_id
: ENSMUSP00000112915
translation
: MKAGCSIVEKPEGGGGYQFPDWAYKAESSPGSRQIQLWHFILELLQKEEFRHVIAWQQGEYGEFVIKDPDEVARLWGRRKCKPQMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFNKLVMPNYPFINIRSSGVVPQSAPPVPTASSRFHFPPLDSHSPTGDVQPGRFSASSLSASGPESGVTTDRKVEPSDLEDGSASDWHRGMDFMPSRNALGGGAVGHQKRKPDILLPLFTRPAMYPDPHSPFAISPVPGRGGVLNVPISPALSLTPTMFSYSPSPGLSPFTSSSCFSFNPEEMKHYLHSQACSVFNYHLSPRTFPRYPGLMVPPLQCQMHPEEPSQFSIKLQPPPAGRKNRERVESREEAVRGSVPASAPVPSRIKVEPATEKDPDSLRQSTQGKEEQTQEVDSMRSRTIEEGKGTGFAHPSPTWPSVSISTPSDEPLEGTEDSEDRSVREPGVPEKKEDALMPPKLRLKRRWNDDPEARELNKTGKFLWNGAGPQGLATTATAAADA
name
Etv3 (ENSMUSG00000003382)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17453.1
Uniprot/SWISSPROT:
Q8R4Z4
RefSeq_peptide:
NP_001076787
RefSeq_peptide:
NP_001273773
RefSeq_peptide:
NP_036181
RefSeq_mRNA:
NM_001083318.2
RefSeq_mRNA:
NM_001286844.1
RefSeq_mRNA:
NM_012051.4
UCSC:uc008psi.2
EMBL:
AC139241
EMBL:
AF156530
EMBL:
AF218539
EMBL:
AY274927
EMBL:
BC078636
EMBL:
CH466547
GO:
GO:0000122
GO:
GO:0000790
GO:
GO:0000977
GO:
GO:0000981
GO:
GO:0001227
GO:
GO:0005515
GO:
GO:0006351
GO:
GO:0008285
GO:
GO:0017053
GO:
GO:0017151
GO:
GO:0030154
GO:
GO:0090571
GO:
GO:0097011
MGI_trans_name:
Etv3-201
goslim_goa:
GO:0000228
goslim_goa:
GO:0001071
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005694
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0019899
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
protein_id:
AAF09185.1
protein_id:
AAH78636.1
protein_id:
AAK56845.1
protein_id:
AAQ18663.1
protein_id:
EDL15354.1
UniParc:
UPI0000020D2E
definition
note
: transcript_id=ENSMUST00000170036
protein_id
: ENSMUSP00000127419
translation
: MKAGCSIVEKPEGGGGYQFPDWAYKAESSPGSRQIQLWHFILELLQKEEFRHVIAWQQGEYGEFVIKDPDEVARLWGRRKCKPQMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFNKLVMPNYPFINIRSSGVVPQSAPPVPTASSRFHFPPLDSHSPTGDVQPGRFSASSLSASGPESGVTTDRKVEPSDLEDGSASDWHRGMDFMPSRNALGGGAVGHQKRKPDILLPLFTRPAMYPDPHSPFAISPVPGRGGVLNVPISPALSLTPTMFSYSPSPGLSPFTSSSCFSFNPEEMKHYLHSQACSVFNYHLSPRTFPRYPGLMVPPLQCQMHPEEPSQFSIKLQPPPAGRKNRERVESREEAVRGSVPASAPVPSRIKVEPATEKDPDSLRQSTQGKEEQTQEVDSMRSRTIEEGKGTGFAHPSPTWPSVSISTPSDEPLEGTEDSEDRSVREPGVPEKKEDALMPPKLRLKRRWNDDPEARELNKTGKFLWNGAGPQGLATTATAAADA
name
type
misc_feature
link
xref
definition
note
: contig AC139241.4 1..191173(-1)
name
Etv3 (ENSMUSG00000003382)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000065944
Vega_transcript:
OTTMUST00000065944
MGI_trans_name:
Etv3-002
OTTT:
OTTMUST00000065944
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000136680
name
Etv3 (ENSMUSG00000003382)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000065946
Vega_transcript:
OTTMUST00000065946
MGI_trans_name:
Etv3-004
OTTT:
OTTMUST00000065946
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000152010
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.