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name
Pklr (ENSMUSG00000041237)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Pklr
note
: pyruvate kinase liver and red blood cell [Source:MGI Symbol;Acc:MGI:97604]
name
Pklr (ENSMUSG00000041237)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000047111
name
Pklr (ENSMUSG00000041237)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000107482
name
Pklr (ENSMUSG00000041237)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000127058
name
Pklr (ENSMUSG00000041237)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17489.1
RefSeq_peptide:
NP_038659
RefSeq_mRNA:
NM_013631.2
Vega_transcript:
OTTMUST00000042489
Vega_transcript:
Pklr-001
Uniprot/SPTREMBL:
G3X925
UCSC:uc008pxp.1
EMBL:
AC161600
EMBL:
CH466547
GO:
GO:0000287
GO:
GO:0001666
GO:
GO:0004743
GO:
GO:0004743
GO:
GO:0005829
GO:
GO:0005975
GO:
GO:0006096
GO:
GO:0006754
GO:
GO:0007584
GO:
GO:0009408
GO:
GO:0009749
GO:
GO:0010038
GO:
GO:0010226
GO:
GO:0014070
GO:
GO:0030955
GO:
GO:0032869
GO:
GO:0033198
GO:
GO:0042866
GO:
GO:0051591
GO:
GO:0051707
GO:
GO:0070062
GO:
GO:0070062
MGI_trans_name:
Pklr-001
Vega_translation:
187641
Vega_translation:
OTTMUSP00000019089
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005975
goslim_goa:
GO:0006091
goslim_goa:
GO:0008150
goslim_goa:
GO:0009056
goslim_goa:
GO:0034641
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0044281
goslim_goa:
GO:0051186
protein_id:
EDL15236.1
OTTP:
OTTMUSP00000019089
OTTT:
OTTMUST00000042489
Reactome:
R-MMU-1430728
Reactome:
R-MMU-70171
Reactome:
R-MMU-70326
Reactome:
R-MMU-71387
UniParc:
UPI00000266A1
definition
note
: transcript_id=ENSMUST00000047111
protein_id
: ENSMUSP00000035417
translation
: MSVQENELPQQLWPWIFKSQKDLAKSALSGAPGGPAGYLRRASVAQLTQELGTAFFQQQQLPAAMADTFLEHLCLLDIDSEPVAARSTSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIREAAESFATSPLSYRPVAIALDTKGPEIRTGVLQGGPESEVEIVKGSQVLVTVDPKFRTRGDAKTVWVDYHNITQVVAVGGRIYIDDGLISLVVRKIGPEGLVTEVEHGGFLGNRKGVNLPNAEVDLPGLSEQDLLDLRFGVEHNVDIIFASFVRKASDVVAVRDALGPEGRGIKIISKIENHEGVKKFDEILEVSDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNLAGKPVVCATQMLESMITKARPTRAETSDVANAVLDGADCIMLSGETAKGSFPVEAVKMQHAIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEASFKCCAAAIIVLTKTGRSAQLLSRYRPRAAVIAVTRSAQAARQVHLSRGVFPLLYREPPEAVWADDVDRRVQFGIESGKLRGFLRVGDLVIVVTGWRPGSGYTNIMRVLTIS
name
Pklr (ENSMUSG00000041237)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS50957.1
RefSeq_peptide:
NP_001093249
RefSeq_mRNA:
NM_001099779.1
RefSeq_mRNA_predicted:
XM_006501134.2
RefSeq_mRNA_predicted:
XM_006501135.2
RefSeq_peptide_predicted:
XP_006501197.1
RefSeq_peptide_predicted:
XP_006501198.1
Vega_transcript:
OTTMUST00000042490
Vega_transcript:
Pklr-002
Uniprot/SPTREMBL:
E9Q509
UCSC:uc008pxq.1
EMBL:
AC161600
GO:
GO:0000287
GO:
GO:0004743
GO:
GO:0006096
GO:
GO:0030955
GO:
GO:0051707
GO:
GO:0070062
MGI_trans_name:
Pklr-002
Vega_translation:
187642
Vega_translation:
OTTMUSP00000019090
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005975
goslim_goa:
GO:0006091
goslim_goa:
GO:0008150
goslim_goa:
GO:0009056
goslim_goa:
GO:0034641
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0044281
goslim_goa:
GO:0051186
OTTP:
OTTMUSP00000019090
OTTT:
OTTMUST00000042490
Reactome:
R-MMU-1430728
Reactome:
R-MMU-70171
Reactome:
R-MMU-70326
Reactome:
R-MMU-71387
UniParc:
UPI0000DBED37
definition
note
: transcript_id=ENSMUST00000107482
protein_id
: ENSMUSP00000103106
translation
: MEGPAGYLRRASVAQLTQELGTAFFQQQQLPAAMADTFLEHLCLLDIDSEPVAARSTSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIREAAESFATSPLSYRPVAIALDTKGPEIRTGVLQGGPESEVEIVKGSQVLVTVDPKFRTRGDAKTVWVDYHNITQVVAVGGRIYIDDGLISLVVRKIGPEGLVTEVEHGGFLGNRKGVNLPNAEVDLPGLSEQDLLDLRFGVEHNVDIIFASFVRKASDVVAVRDALGPEGRGIKIISKIENHEGVKKFDEILEVSDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNLAGKPVVCATQMLESMITKARPTRAETSDVANAVLDGADCIMLSGETAKGSFPVEAVKMQHAIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEASFKCCAAAIIVLTKTGRSAQLLSRYRPRAAVIAVTRSAQAARQVHLSRGVFPLLYREPPEAVWADDVDRRVQFGIESGKLRGFLRVGDLVIVVTGWRPGSGYTNIMRVLTIS
name
Pklr (ENSMUSG00000041237)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000042491
Vega_transcript:
Pklr-003
Uniprot/SPTREMBL:
D3Z2C4
EMBL:
AC161600
GO:
GO:0000287
GO:
GO:0004743
GO:
GO:0006096
GO:
GO:0030955
GO:
GO:0051707
GO:
GO:0070062
MGI_trans_name:
Pklr-003
Vega_translation:
187643
Vega_translation:
OTTMUSP00000019091
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005975
goslim_goa:
GO:0006091
goslim_goa:
GO:0008150
goslim_goa:
GO:0009056
goslim_goa:
GO:0034641
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0044281
goslim_goa:
GO:0051186
OTTP:
OTTMUSP00000019091
OTTT:
OTTMUST00000042491
Reactome:
R-MMU-1430728
Reactome:
R-MMU-70171
Reactome:
R-MMU-70326
Reactome:
R-MMU-71387
UniParc:
UPI0000DBED38
definition
note
: transcript_id=ENSMUST00000127058
protein_id
: ENSMUSP00000119392
translation
: MADTFLEHLCLLDIDSEPVAARSTSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIRE
name
type
misc_feature
link
xref
definition
note
: contig AC161600.6 119910..218929(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.