VariantTable
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name
Trim46 (ENSMUSG00000042766)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Trim46
note
: tripartite motif-containing 46 [Source:MGI Symbol;Acc:MGI:2673000]
name
Trim46 (ENSMUSG00000042766)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000107464
name
Trim46 (ENSMUSG00000042766)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000090924
name
Trim46 (ENSMUSG00000042766)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000041022
name
Trim46 (ENSMUSG00000042766)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000143637
name
Trim46 (ENSMUSG00000042766)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_mRNA_predicted:
XM_006501613.1
RefSeq_mRNA_predicted:
XM_006501614.2
RefSeq_peptide_predicted:
XP_006501676.1
RefSeq_peptide_predicted:
XP_006501677.1
Vega_transcript:
OTTMUST00000052225
Vega_transcript:
Trim46-004
Uniprot/SPTREMBL:
D3YXA6
UCSC:uc008pyk.1
EMBL:
AC132327
GO:
GO:0005575
GO:
GO:0005622
GO:
GO:0008150
GO:
GO:0008270
MGI_trans_name:
Trim46-004
Vega_translation:
187679
Vega_translation:
OTTMUSP00000024717
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
OTTP:
OTTMUSP00000024717
OTTT:
OTTMUST00000052225
UniParc:
UPI0000F22269
definition
note
: transcript_id=ENSMUST00000107464
protein_id
: ENSMUSP00000103088
translation
: MKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREVLGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGALHPQTILFPCPACQGDVELGERGLSGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLAYILGNQDTVQTQICELEETIRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLSRLSAQIHEHQSLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKLLTELSFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRWQRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDGRWGASRERLAISKDQRAVRSIPGLPLLLAAERLLTGCHLSVDVVLGDVAVTQGRSYWACAVDPASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDAAVEALPPFAFLTIGMGKILLGSGASSNAGLTGRDGPTASCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLECPLDCSGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD
name
Trim46 (ENSMUSG00000042766)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17498.1
RefSeq_peptide:
NP_001034555
RefSeq_mRNA:
NM_001039466.1
RefSeq_mRNA_predicted:
XM_006501616.2
RefSeq_peptide_predicted:
XP_006501679.2
Vega_transcript:
OTTMUST00000052224
Vega_transcript:
Trim46-003
Uniprot/SPTREMBL:
Q3TC52
UCSC:uc008pyj.1
Fantom:
F630208L19
EMBL:
AC132327
EMBL:
AK170904
GO:
GO:0005575
GO:
GO:0005622
GO:
GO:0008150
GO:
GO:0008270
MGI_trans_name:
Trim46-003
Vega_translation:
187680
Vega_translation:
OTTMUSP00000024716
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
protein_id:
BAE42105.1
OTTP:
OTTMUSP00000024716
OTTT:
OTTMUST00000052224
UniParc:
UPI00005B2732
definition
note
: transcript_id=ENSMUST00000090924
protein_id
: ENSMUSP00000088442
translation
: MAAKRGTKTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREVLGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGALHPQTILFPCPACQGDVELGERGLSGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLAYILGNQDTVQTQICELEETIRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLSRLSAQIHEHQSLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKLLTELSFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRWQRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPDTTRTVGTTAVPRTLPWRRYHPLLS
name
Trim46 (ENSMUSG00000042766)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17497.1
Uniprot/SWISSPROT:
Q7TNM2
RefSeq_peptide:
NP_898858
RefSeq_mRNA:
NM_183037.2
RefSeq_mRNA_predicted:
XM_006501615.2
RefSeq_mRNA_predicted:
XM_011240152.1
RefSeq_peptide_predicted:
XP_006501678.1
RefSeq_peptide_predicted:
XP_011238454.1
Vega_transcript:
OTTMUST00000052222
Vega_transcript:
Trim46-001
UCSC:uc008pyk.1
EMBL:
AY251388
EMBL:
BC065049
EMBL:
U16175
GO:
GO:0005575
GO:
GO:0005622
GO:
GO:0008150
GO:
GO:0008270
MGI_trans_name:
Trim46-001
Vega_translation:
187681
Vega_translation:
OTTMUSP00000024715
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
protein_id:
AAA98539.1
protein_id:
AAP51208.1
OTTP:
OTTMUSP00000024715
OTTT:
OTTMUST00000052222
UniParc:
UPI00001B5E1C
definition
note
: transcript_id=ENSMUST00000041022
protein_id
: ENSMUSP00000036053
translation
: MAEGEDMQTFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREVLGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGALHPQTILFPCPACQGDVELGERGLSGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLAYILGNQDTVQTQICELEETIRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLSRLSAQIHEHQSLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKLLTELSFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRWQRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDGRWGASRERLAISKDQRAVRSIPGLPLLLAAERLLTGCHLSVDVVLGDVAVTQGRSYWACAVDPASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDAAVEALPPFAFLTIGMGKILLGSGASSNAGLTGRDGPTASCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLECPLDCSGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD
name
Trim46 (ENSMUSG00000042766)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000052223
Vega_transcript:
Trim46-002
Uniprot/SPTREMBL:
E9PUI3
UCSC:uc008pyk.1
EMBL:
AC132327
GO:
GO:0005575
GO:
GO:0005622
GO:
GO:0008150
GO:
GO:0008270
MGI_trans_name:
Trim46-002
Vega_translation:
187682
Vega_translation:
OTTMUSP00000043879
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
OTTP:
OTTMUSP00000043879
OTTT:
OTTMUST00000052223
UniParc:
UPI0001889B16
definition
note
: transcript_id=ENSMUST00000143637
protein_id
: ENSMUSP00000119270
translation
: MAEGEDMQTFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREVLGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGALHPQTILFPCPACQGDVELGERGLSGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLAYILGNQDTVQTQICELEETIRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLSRLSAQIHEHQSLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKLLTELSFLRGCGHRGLCSGAPQCPRRPS
name
type
misc_feature
link
xref
definition
note
: contig AC132327.3 82537..174267(1)
name
Trim46 (ENSMUSG00000042766)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000052226
Vega_transcript:
OTTMUST00000052226
MGI_trans_name:
Trim46-005
OTTT:
OTTMUST00000052226
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000139419
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.