VariantTable
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name
Efna1 (ENSMUSG00000027954)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Efna1
note
: ephrin A1 [Source:MGI Symbol;Acc:MGI:103236]
name
Efna1 (ENSMUSG00000027954)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000029566
name
Efna1 (ENSMUSG00000027954)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000118587
name
Efna1 (ENSMUSG00000027954)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000118860
name
Efna1 (ENSMUSG00000027954)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17501.1
Uniprot/SWISSPROT:
P52793
RefSeq_peptide:
NP_034237
RefSeq_mRNA:
NM_010107.4
Vega_transcript:
Efna1-001
Vega_transcript:
OTTMUST00000071370
UCSC:uc008pyo.2
EMBL:
BC002046
EMBL:
D38146
EMBL:
U26188
EMBL:
U90662
GO:
GO:0000122
GO:
GO:0000187
GO:
GO:0001525
GO:
GO:0003180
GO:
GO:0003183
GO:
GO:0003199
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005886
GO:
GO:0007411
GO:
GO:0010719
GO:
GO:0014028
GO:
GO:0016477
GO:
GO:0016477
GO:
GO:0030182
GO:
GO:0033628
GO:
GO:0033628
GO:
GO:0034446
GO:
GO:0034446
GO:
GO:0043535
GO:
GO:0045765
GO:
GO:0046658
GO:
GO:0046875
GO:
GO:0046875
GO:
GO:0048013
GO:
GO:0048013
GO:
GO:0050730
GO:
GO:0050731
GO:
GO:0050731
GO:
GO:0050770
GO:
GO:0061002
GO:
GO:0070062
GO:
GO:0070062
MGI_trans_name:
Efna1-001
Vega_translation:
187691
Vega_translation:
OTTMUSP00000036557
goslim_goa:
GO:0000902
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0009790
goslim_goa:
GO:0030154
goslim_goa:
GO:0040011
goslim_goa:
GO:0043226
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
goslim_goa:
GO:0048870
protein_id:
AAA67563.1
protein_id:
AAB50237.1
protein_id:
AAH02046.1
protein_id:
BAA07344.1
OTTP:
OTTMUSP00000036557
OTTT:
OTTMUST00000071370
Reactome:
R-MMU-1266738
Reactome:
R-MMU-2682334
Reactome:
R-MMU-3928663
Reactome:
R-MMU-3928665
Reactome:
R-MMU-422475
UniParc:
UPI0000001833
definition
note
: transcript_id=ENSMUST00000029566
protein_id
: ENSMUSP00000029566
translation
: MEFLWAPLLGLCCSLAAADRHIVFWNSSNPKFREEDYTVHVQLNDYLDIICPHYEDDSVADAAMERYTLYMVEHQEYVACQPQSKDQVRWNCNRPSAKHGPEKLSEKFQRFTPFILGKEFKEGHSYYYISKPIYHQESQCLKLKVTVNGKITHNPQAHVNPQEKRLQADDPEVQVLHSIGYSAAPRLFPLVWAVLLLPLLLLQSQ
name
Efna1 (ENSMUSG00000027954)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Efna1-003
Vega_transcript:
OTTMUST00000071372
Uniprot/SPTREMBL:
D3Z7A6
UCSC:uc008pyo.2
EMBL:
AC132327
GO:
GO:0000187
GO:
GO:0005886
GO:
GO:0007411
GO:
GO:0014028
GO:
GO:0016477
GO:
GO:0030182
GO:
GO:0033628
GO:
GO:0034446
GO:
GO:0046875
GO:
GO:0048013
GO:
GO:0050731
GO:
GO:0050770
GO:
GO:0070062
MGI_trans_name:
Efna1-003
Vega_translation:
187693
Vega_translation:
OTTMUSP00000036559
goslim_goa:
GO:0000902
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0009790
goslim_goa:
GO:0030154
goslim_goa:
GO:0040011
goslim_goa:
GO:0043226
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
goslim_goa:
GO:0048870
OTTP:
OTTMUSP00000036559
OTTT:
OTTMUST00000071372
UniParc:
UPI00016116C7
definition
note
: transcript_id=ENSMUST00000118860
protein_id
: ENSMUSP00000113098
translation
: MEFLWAPLLGLCCSLAAADRHIVFWNSSNPKFREEDYTVHVQLNDYLDIICPHYEDDSVADAAMERYTLYMVEHQEYVACQPQSKDQVRWNCNRPSAKHGPEKLSEKFQRFTPFILGKEFKEGHSYYYISHNPQAHVNPQEKRLQADDPEVQVLHSIGYSAAPRLFPLVWAVLLLPLLLLQSQ
name
type
misc_feature
link
xref
definition
note
: contig AC132327.3 82537..174267(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.