VariantTable
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name
Shc1 (ENSMUSG00000042626)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Shc1
note
: src homology 2 domain-containing transforming protein C1 [Source:MGI Symbol;Acc:MGI:98296]
name
Shc1 (ENSMUSG00000042626)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000039110
name
Shc1 (ENSMUSG00000042626)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000125036
name
Shc1 (ENSMUSG00000042626)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000191485
name
Shc1 (ENSMUSG00000042626)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000154791
name
Shc1 (ENSMUSG00000042626)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000128238
name
Shc1 (ENSMUSG00000042626)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000107417
name
Shc1 (ENSMUSG00000042626)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000094378
name
Shc1 (ENSMUSG00000042626)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000137793
name
Shc1 (ENSMUSG00000042626)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17508.1
Uniprot/SWISSPROT:
P98083
Vega_transcript:
OTTMUST00000052403
Vega_transcript:
Shc1-001
UCSC:uc008pzm.2
Fantom:
C330027D01
Fantom:
F630204K04
EMBL:
AF455140
EMBL:
AK049357
EMBL:
AK155158
EMBL:
BC036172
EMBL:
U15784
EMBL:
U46956
GO:
GO:0000165
GO:
GO:0000187
GO:
GO:0001525
GO:
GO:0005158
GO:
GO:0005159
GO:
GO:0005168
GO:
GO:0005515
GO:
GO:0005759
GO:
GO:0005829
GO:
GO:0005886
GO:
GO:0007173
GO:
GO:0007507
GO:
GO:0008286
GO:
GO:0016337
GO:
GO:0019901
GO:
GO:0030971
GO:
GO:0031532
GO:
GO:0040008
GO:
GO:0042127
GO:
GO:0046875
MGI_trans_name:
Shc1-001
Vega_translation:
187720
Vega_translation:
OTTMUSP00000024847
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0005829
goslim_goa:
GO:0005886
goslim_goa:
GO:0006464
goslim_goa:
GO:0007010
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0019899
goslim_goa:
GO:0043226
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
protein_id:
AAA91777.2
protein_id:
AAC52146.1
protein_id:
AAH36172.1
protein_id:
AAM61857.1
protein_id:
AAM61858.1
protein_id:
BAC33706.1
protein_id:
BAE33083.1
OTTP:
OTTMUSP00000024847
OTTT:
OTTMUST00000052403
UniParc:
UPI0000024969
definition
note
: transcript_id=ENSMUST00000039110
protein_id
: ENSMUSP00000035361
translation
: MNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDRMAGFDGSAWDEEEEEPPDHQYYNDFPGKEPPLGGVVDMRLREGAARPTLPSAQMSSHLGATLPIGQHAAGDHEVRKQMLPPPPCPGRELFDDPSYVNIQNLDKARQAGGGAGPPNPSLNGSAPRDLFDMKPFEDALRVPPPPQSMSMAEQLQGEPWFHGKLSRREAEALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQPVDRKV
name
Shc1 (ENSMUSG00000042626)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17508.1
Uniprot/SWISSPROT:
P98083
RefSeq_peptide:
NP_035498
RefSeq_mRNA:
NM_011368.5
UCSC:uc008pzm.2
Fantom:
C330027D01
Fantom:
F630204K04
EMBL:
AF455140
EMBL:
AK049357
EMBL:
AK155158
EMBL:
BC036172
EMBL:
U15784
EMBL:
U46956
GO:
GO:0000165
GO:
GO:0000187
GO:
GO:0001525
GO:
GO:0005158
GO:
GO:0005159
GO:
GO:0005168
GO:
GO:0005515
GO:
GO:0005759
GO:
GO:0005829
GO:
GO:0005886
GO:
GO:0007173
GO:
GO:0007507
GO:
GO:0008286
GO:
GO:0016337
GO:
GO:0019901
GO:
GO:0030971
GO:
GO:0031532
GO:
GO:0040008
GO:
GO:0042127
GO:
GO:0046875
MGI_trans_name:
Shc1-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0005829
goslim_goa:
GO:0005886
goslim_goa:
GO:0006464
goslim_goa:
GO:0007010
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0019899
goslim_goa:
GO:0043226
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
protein_id:
AAA91777.2
protein_id:
AAC52146.1
protein_id:
AAH36172.1
protein_id:
AAM61857.1
protein_id:
AAM61858.1
protein_id:
BAC33706.1
protein_id:
BAE33083.1
UniParc:
UPI0000024969
definition
note
: transcript_id=ENSMUST00000191485
protein_id
: ENSMUSP00000140336
translation
: MNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDRMAGFDGSAWDEEEEEPPDHQYYNDFPGKEPPLGGVVDMRLREGAARPTLPSAQMSSHLGATLPIGQHAAGDHEVRKQMLPPPPCPGRELFDDPSYVNIQNLDKARQAGGGAGPPNPSLNGSAPRDLFDMKPFEDALRVPPPPQSMSMAEQLQGEPWFHGKLSRREAEALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQPVDRKV
name
Shc1 (ENSMUSG00000042626)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000052408
Vega_transcript:
Shc1-006
Uniprot/SPTREMBL:
D3YXZ9
EMBL:
AC171273
GO:
GO:0000165
GO:
GO:0000187
GO:
GO:0001525
GO:
GO:0005158
GO:
GO:0005159
GO:
GO:0005168
GO:
GO:0005515
GO:
GO:0005622
GO:
GO:0005886
GO:
GO:0007173
GO:
GO:0007507
GO:
GO:0008286
GO:
GO:0016337
GO:
GO:0019901
GO:
GO:0030971
GO:
GO:0031532
GO:
GO:0042127
GO:
GO:0046875
MGI_trans_name:
Shc1-006
Vega_translation:
187722
Vega_translation:
OTTMUSP00000024851
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006464
goslim_goa:
GO:0007010
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0019899
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
OTTP:
OTTMUSP00000024851
OTTT:
OTTMUST00000052408
UniParc:
UPI0000F22271
definition
note
: transcript_id=ENSMUST00000154791
protein_id
: ENSMUSP00000123635
translation
: MNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKIIANHHMQSISFASGGDP
name
Shc1 (ENSMUSG00000042626)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000052409
Vega_transcript:
Shc1-007
Uniprot/SPTREMBL:
D3Z2I8
UCSC:uc008pzm.2
EMBL:
AC171273
GO:
GO:0000165
GO:
GO:0000187
GO:
GO:0001525
GO:
GO:0005158
GO:
GO:0005159
GO:
GO:0005168
GO:
GO:0005515
GO:
GO:0005622
GO:
GO:0005886
GO:
GO:0007173
GO:
GO:0007507
GO:
GO:0008286
GO:
GO:0016337
GO:
GO:0019901
GO:
GO:0030971
GO:
GO:0031532
GO:
GO:0042127
GO:
GO:0046875
MGI_trans_name:
Shc1-007
Vega_translation:
187723
Vega_translation:
OTTMUSP00000024852
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006464
goslim_goa:
GO:0007010
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0019899
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
OTTP:
OTTMUSP00000024852
OTTT:
OTTMUST00000052409
UniParc:
UPI0000F22272
definition
note
: transcript_id=ENSMUST00000128238
protein_id
: ENSMUSP00000119293
translation
: MNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMPITLTVSTSSLNLMAADCKQDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDRMAGFDGSAWDEEEEEPPDHQYYNDFPGKEPPLGGVVDMRLREGAARPTLPSAQMSSHLGATL
name
Shc1 (ENSMUSG00000042626)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS50962.1
Uniprot/SWISSPROT:
P98083
RefSeq_peptide:
NP_001106802
RefSeq_mRNA:
NM_001113331.2
Vega_transcript:
OTTMUST00000052404
Vega_transcript:
Shc1-002
UCSC:uc008pzn.2
Fantom:
C330027D01
Fantom:
F630204K04
EMBL:
AF455140
EMBL:
AK049357
EMBL:
AK155158
EMBL:
BC036172
EMBL:
U15784
EMBL:
U46956
GO:
GO:0000165
GO:
GO:0000165
GO:
GO:0000187
GO:
GO:0000187
GO:
GO:0000187
GO:
GO:0001525
GO:
GO:0001666
GO:
GO:0001784
GO:
GO:0005158
GO:
GO:0005158
GO:
GO:0005159
GO:
GO:0005159
GO:
GO:0005168
GO:
GO:0005168
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005737
GO:
GO:0005759
GO:
GO:0005829
GO:
GO:0005886
GO:
GO:0005886
GO:
GO:0005886
GO:
GO:0007173
GO:
GO:0007507
GO:
GO:0007568
GO:
GO:0008286
GO:
GO:0009636
GO:
GO:0010008
GO:
GO:0014070
GO:
GO:0016337
GO:
GO:0019901
GO:
GO:0030036
GO:
GO:0030182
GO:
GO:0030971
GO:
GO:0031100
GO:
GO:0031175
GO:
GO:0031532
GO:
GO:0032403
GO:
GO:0032868
GO:
GO:0032869
GO:
GO:0035094
GO:
GO:0040008
GO:
GO:0042127
GO:
GO:0042542
GO:
GO:0045907
GO:
GO:0046875
GO:
GO:0046875
GO:
GO:0048661
GO:
GO:0051219
GO:
GO:0051384
GO:
GO:0051721
MGI_trans_name:
Shc1-002
Vega_translation:
187725
Vega_translation:
OTTMUSP00000024848
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0005829
goslim_goa:
GO:0005886
goslim_goa:
GO:0006464
goslim_goa:
GO:0007010
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0019899
goslim_goa:
GO:0043226
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
protein_id:
AAA91777.2
protein_id:
AAC52146.1
protein_id:
AAH36172.1
protein_id:
AAM61857.1
protein_id:
AAM61858.1
protein_id:
BAC33706.1
protein_id:
BAE33083.1
OTTP:
OTTMUSP00000024848
OTTT:
OTTMUST00000052404
UniParc:
UPI0000028F4C
definition
note
: transcript_id=ENSMUST00000094378
protein_id
: ENSMUSP00000091940
translation
: MDLLPPKPKYNPLRNESLSSLEEGASGSTPPEELPSPSASSLGPILPPLPGDDSPTTLCSFFPRMSNLKLANPAGGRLGPKGEPGKAAEDGEGSAGAALRDSGLLPLLQDMNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDRMAGFDGSAWDEEEEEPPDHQYYNDFPGKEPPLGGVVDMRLREGAARPTLPSAQMSSHLGATLPIGQHAAGDHEVRKQMLPPPPCPGRELFDDPSYVNIQNLDKARQAGGGAGPPNPSLNGSAPRDLFDMKPFEDALRVPPPPQSMSMAEQLQGEPWFHGKLSRREAEALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQPVDRKV
name
Shc1 (ENSMUSG00000042626)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000052410
Vega_transcript:
Shc1-008
Uniprot/SPTREMBL:
D3Z5U6
UCSC:uc008pzn.2
EMBL:
AC171273
GO:
GO:0000165
GO:
GO:0000187
GO:
GO:0001525
GO:
GO:0005158
GO:
GO:0005159
GO:
GO:0005168
GO:
GO:0005515
GO:
GO:0005622
GO:
GO:0005886
GO:
GO:0007173
GO:
GO:0007507
GO:
GO:0008286
GO:
GO:0016337
GO:
GO:0019901
GO:
GO:0030971
GO:
GO:0031532
GO:
GO:0042127
GO:
GO:0046875
MGI_trans_name:
Shc1-008
Vega_translation:
187726
Vega_translation:
OTTMUSP00000024853
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006464
goslim_goa:
GO:0007010
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0019899
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
OTTP:
OTTMUSP00000024853
OTTT:
OTTMUST00000052410
UniParc:
UPI0000F22230
definition
note
: transcript_id=ENSMUST00000137793
protein_id
: ENSMUSP00000117190
translation
: MNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDRMAGFDGSAWDEEEEEPPDHQYYNDFPGKEPPLGGVVDMRLREGAARPTLPSAQMSSHLGATL
name
type
misc_feature
link
xref
definition
note
: contig AC171273.1 1..225304(-1)
name
Shc1 (ENSMUSG00000042626)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000052406
Vega_transcript:
OTTMUST00000052406
MGI_trans_name:
Shc1-004
OTTT:
OTTMUST00000052406
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000153334
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.