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name
Tpm3 (ENSMUSG00000027940)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Tpm3
note
: tropomyosin 3, gamma [Source:MGI Symbol;Acc:MGI:1890149]
name
Tpm3 (ENSMUSG00000027940)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000121503
name
Tpm3 (ENSMUSG00000027940)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000119570
name
Tpm3 (ENSMUSG00000027940)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000062193
name
Tpm3 (ENSMUSG00000027940)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000029549
name
Tpm3 (ENSMUSG00000027940)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000118566
name
Tpm3 (ENSMUSG00000027940)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000119158
name
Tpm3 (ENSMUSG00000027940)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000149432
name
Tpm3 (ENSMUSG00000027940)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000127955
name
Tpm3 (ENSMUSG00000027940)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_peptide:
NP_001280677.2
RefSeq_mRNA:
NM_001293748.1
RefSeq_peptide_predicted:
XP_011238481.1
RefSeq_peptide_predicted:
XP_011238482.1
RefSeq_peptide_predicted:
XP_011238484.1
Vega_transcript:
OTTMUST00000073539
Vega_transcript:
Tpm3-002
UCSC:uc008qbf.3
MGI_trans_name:
Tpm3-002
Vega_translation:
187784
Vega_translation:
OTTMUSP00000038083
OTTP:
OTTMUSP00000038083
OTTT:
OTTMUST00000073539
UniParc:
UPI00000283A1
definition
note
: transcript_id=ENSMUST00000121503
protein_id
: ENSMUSP00000113578
translation
: MEAIKKKMQMLKLDKENVLDRAEQAEAEQKQAEERSKQLEDELATMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISDELDHALNDMTSI
name
Tpm3 (ENSMUSG00000027940)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_peptide:
NP_071709.3
RefSeq_mRNA:
NM_022314.3
RefSeq_peptide_predicted:
XP_011238483.1
Vega_transcript:
OTTMUST00000073538
Vega_transcript:
Tpm3-001
Uniprot/SPTREMBL:
E9Q5J9
UCSC:uc008qbg.2
EMBL:
AC163616
GO:
GO:0001725
GO:
GO:0002102
GO:
GO:0005515
GO:
GO:0005737
GO:
GO:0030426
GO:
GO:0030863
GO:
GO:0031941
GO:
GO:0032154
GO:
GO:0043005
GO:
GO:0070062
MGI_trans_name:
Tpm3-001
Vega_translation:
187785
Vega_translation:
OTTMUSP00000038082
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005856
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
OTTP:
OTTMUSP00000038082
OTTT:
OTTMUST00000073538
UniParc:
UPI000154FED0
definition
note
: transcript_id=ENSMUST00000119570
protein_id
: ENSMUSP00000113978
translation
: MMEAIKKKMQMLKLDKENVLDRAEQAEAEQKQAEERSKQLEDELATMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM
name
Tpm3 (ENSMUSG00000027940)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS38499.1
Uniprot/SPTREMBL:
Q8K0Z5
UCSC:uc008qbg.2
EMBL:
AC163616
EMBL:
BC029186
GO:
GO:0001725
GO:
GO:0002102
GO:
GO:0005515
GO:
GO:0005737
GO:
GO:0030426
GO:
GO:0030863
GO:
GO:0031941
GO:
GO:0032154
GO:
GO:0043005
GO:
GO:0070062
MGI_trans_name:
Tpm3-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005856
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
protein_id:
AAH29186.1
UniParc:
UPI00000282ED
definition
note
: transcript_id=ENSMUST00000062193
protein_id
: ENSMUSP00000062920
translation
: MEAIKKKMQMLKLDKENVLDRAEQAEAEQKQAEERSKQLEDELATMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM
name
Tpm3 (ENSMUSG00000027940)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS57223.1
RefSeq_peptide:
NP_001240667
RefSeq_peptide:
NP_001258693.1
RefSeq_mRNA:
NM_001253738.1
RefSeq_mRNA:
NM_001271764.1
Vega_transcript:
OTTMUST00000073540
Vega_transcript:
Tpm3-003
Uniprot/SPTREMBL:
Q58E70
UCSC:uc008qbj.2
Fantom:
E430027O16
Fantom:
F520012P16
Fantom:
G930025M02
Fantom:
G930027B15
Fantom:
I1C0015O22
Fantom:
I1C0047B08
Fantom:
I1C0048D10
Fantom:
I420044B07
Fantom:
I530019A02
Fantom:
I730059D11
Fantom:
I830030D09
Fantom:
I830031A16
Fantom:
I830031O11
Fantom:
I830032A04
Fantom:
I830032B17
Fantom:
I830081O10
Fantom:
I830119I22
Fantom:
I920026I06
Fantom:
I920059N07
Fantom:
I920080B16
Fantom:
I920097N04
EMBL:
AK145238
EMBL:
AK145243
EMBL:
AK145804
EMBL:
AK146349
EMBL:
AK146557
EMBL:
AK151441
EMBL:
AK151500
EMBL:
AK151578
EMBL:
AK151595
EMBL:
AK151602
EMBL:
AK152659
EMBL:
AK153031
EMBL:
AK160011
EMBL:
AK165428
EMBL:
AK166836
EMBL:
AK167268
EMBL:
AK167534
EMBL:
AK168843
EMBL:
AK169102
EMBL:
AK169245
EMBL:
AK169821
EMBL:
BC092045
MGI_trans_name:
Tpm3-003
Vega_translation:
187786
Vega_translation:
OTTMUSP00000038084
protein_id:
AAH92045.1
protein_id:
BAE26319.1
protein_id:
BAE26321.1
protein_id:
BAE26659.1
protein_id:
BAE27101.1
protein_id:
BAE27258.1
protein_id:
BAE30403.1
protein_id:
BAE30451.1
protein_id:
BAE30518.1
protein_id:
BAE30535.1
protein_id:
BAE30542.1
protein_id:
BAE31395.1
protein_id:
BAE31663.1
protein_id:
BAE35558.1
protein_id:
BAE38183.1
protein_id:
BAE39058.1
protein_id:
BAE39381.1
protein_id:
BAE39603.1
protein_id:
BAE40666.1
protein_id:
BAE40884.1
protein_id:
BAE41009.1
protein_id:
BAE41391.1
OTTP:
OTTMUSP00000038084
OTTT:
OTTMUST00000073540
UniParc:
UPI0000004196
definition
note
: transcript_id=ENSMUST00000029549
protein_id
: ENSMUSP00000029549
translation
: MAGTTTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM
name
Tpm3 (ENSMUSG00000027940)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_peptide:
NP_001240669.1
RefSeq_mRNA:
NM_001253740.1
RefSeq_peptide_predicted:
XP_006501898.1
RefSeq_peptide_predicted:
XP_006501899.1
RefSeq_peptide_predicted:
XP_006501901.1
RefSeq_peptide_predicted:
XP_011238485.1
Vega_transcript:
OTTMUST00000073541
Vega_transcript:
Tpm3-004
Uniprot/SPTREMBL:
E9Q7Q3
UCSC:uc029ung.1
EMBL:
AC163616
GO:
GO:0001725
GO:
GO:0002102
GO:
GO:0005515
GO:
GO:0005737
GO:
GO:0030426
GO:
GO:0030863
GO:
GO:0031941
GO:
GO:0032154
GO:
GO:0043005
GO:
GO:0070062
MGI_trans_name:
Tpm3-004
Vega_translation:
187787
Vega_translation:
OTTMUSP00000038085
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005856
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
OTTP:
OTTMUSP00000038085
OTTT:
OTTMUST00000073541
UniParc:
UPI00016116E9
definition
note
: transcript_id=ENSMUST00000118566
protein_id
: ENSMUSP00000113056
translation
: MAGTTTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISDELDHALNDMTSI
name
Tpm3 (ENSMUSG00000027940)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_peptide:
NP_001280678
RefSeq_mRNA:
NM_001293749.1
RefSeq_peptide_predicted:
XP_006501902.1
Vega_transcript:
OTTMUST00000073606
Vega_transcript:
Tpm3-005
Uniprot/SPTREMBL:
D3Z6I8
UCSC:uc056ztn.1
EMBL:
AC163616
GO:
GO:0001725
GO:
GO:0002102
GO:
GO:0005515
GO:
GO:0005737
GO:
GO:0030426
GO:
GO:0030863
GO:
GO:0031941
GO:
GO:0032154
GO:
GO:0043005
GO:
GO:0070062
MGI_trans_name:
Tpm3-005
Vega_translation:
187788
Vega_translation:
OTTMUSP00000038133
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005856
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
OTTP:
OTTMUSP00000038133
OTTT:
OTTMUST00000073606
UniParc:
UPI0000196051
definition
note
: transcript_id=ENSMUST00000119158
protein_id
: ENSMUSP00000113219
translation
: MAGTTTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLERNRLLSNELKLTLHGLCD
name
type
misc_feature
link
xref
definition
note
: contig AC163616.3 32900..212857(1)
name
Tpm3 (ENSMUSG00000027940)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000073612
Vega_transcript:
OTTMUST00000073612
MGI_trans_name:
Tpm3-011
OTTT:
OTTMUST00000073612
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000147430
name
Tpm3 (ENSMUSG00000027940)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000073607
Vega_transcript:
OTTMUST00000073607
MGI_trans_name:
Tpm3-006
OTTT:
OTTMUST00000073607
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000131354
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
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show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.