VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Crtc2 (ENSMUSG00000027936)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Crtc2
note
: CREB regulated transcription coactivator 2 [Source:MGI Symbol;Acc:MGI:1921593]
name
Crtc2 (ENSMUSG00000027936)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000029545
name
Crtc2 (ENSMUSG00000027936)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS38501.1
Uniprot/SWISSPROT:
Q3U182
RefSeq_peptide:
NP_083157
RefSeq_mRNA:
NM_028881.2
RefSeq_peptide_predicted:
XP_006502215.1
Vega_transcript:
Crtc2-001
Vega_transcript:
OTTMUST00000050376
UCSC:uc008qbt.2
Fantom:
F830011E10
Fantom:
F830035H11
EMBL:
AK156192
EMBL:
AK172084
EMBL:
BC023831
EMBL:
BC032183
EMBL:
BC033300
GO:
GO:0003682
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0006094
GO:
GO:0006351
GO:
GO:0008140
GO:
GO:0032793
GO:
GO:0042593
GO:
GO:0043970
GO:
GO:0045944
GO:
GO:0051289
GO:
GO:0070062
GO:
GO:0070062
GO:
GO:1901998
MGI_trans_name:
Crtc2-001
Vega_translation:
187803
Vega_translation:
OTTMUSP00000023505
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005975
goslim_goa:
GO:0006461
goslim_goa:
GO:0006464
goslim_goa:
GO:0006810
goslim_goa:
GO:0008134
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0022607
goslim_goa:
GO:0034641
goslim_goa:
GO:0042592
goslim_goa:
GO:0043226
goslim_goa:
GO:0051276
goslim_goa:
GO:0065003
protein_id:
AAH23831.1
protein_id:
AAH32183.1
protein_id:
AAH33300.1
protein_id:
BAE33618.1
protein_id:
BAE42818.1
OTTP:
OTTMUSP00000023505
OTTT:
OTTMUST00000050376
UniParc:
UPI00000EB98E
definition
note
: transcript_id=ENSMUST00000029545
protein_id
: ENSMUSP00000029545
translation
: MATSGANGPGSATASASNPRKFSEKIALQKQRQAEETAAFEEVMMDIGSTRLQAQKLRLAYTRSSHYGGSLPNVNQIGCGLAEFQSPLHSPLDSSRSTRHHGLVERVQRDARRMVSPLRRYPRHIDSSPYSPAYLSPPPESGWRRMMPWGNLPAEKGQLFRLPSALNRTSSDSALHTSVMNPNPQDTYPGPTPPSVLPSRRGGGFLDGEMDAKVPAIEENVVDDKHLLKPWDAKKLSSSSSRPRSCEVPGINIFPSPDQPANVPVLPPAMNTGGSLPDLTNLHFPPPLPTPLDPEETVYPSLSGGNSTTNLTHTMTHLGISGGLGLGPSYDVPGLHSPLSHPSLQSSLSNPNLQASLSSPQPQLQGSHSHPSLPASSLAHHALPTTSLGHPSLSAPALSSSSSSSSTSSPVLSAPPYPASTPGASPRHRRVPLSPLSLPAGPADARRSQQQLPKQFSPTMSPTLSSITQGVPLDTSKLPTDQRLPPYPYSPPSLVIPTHPPTPKSLQQLPSQACLVQPSGGQPPGRQPHYGALYPPGSSGHGQQPYHRPINDFSLGNLEQFNMESPSTSLVLDPPAFSEGPGFLGSEGSMSGPQDPHVLNHQNLTHCSRHGSGPNIILTGDSSPGFSKEIAAALAGVPGFEVSASGLELGLGLEDELRMEPLGLEGLTMLSDPCALLPDPAVEDSFRSDRLQ
name
type
misc_feature
link
xref
definition
note
: contig AC119825.11 100036..205291(1)
name
Crtc2 (ENSMUSG00000027936)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000050378
Vega_transcript:
OTTMUST00000050378
MGI_trans_name:
Crtc2-003
OTTT:
OTTMUST00000050378
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000149422
name
Crtc2 (ENSMUSG00000027936)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000050379
Vega_transcript:
OTTMUST00000050379
MGI_trans_name:
Crtc2-004
OTTT:
OTTMUST00000050379
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000130002
name
Crtc2 (ENSMUSG00000027936)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000050408
Vega_transcript:
OTTMUST00000050408
MGI_trans_name:
Crtc2-008
OTTT:
OTTMUST00000050408
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000123964
name
Crtc2 (ENSMUSG00000027936)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000050377
Vega_transcript:
OTTMUST00000050377
MGI_trans_name:
Crtc2-002
OTTT:
OTTMUST00000050377
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000136970
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.