VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
S100a14 (ENSMUSG00000042306)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: S100a14
note
: S100 calcium binding protein A14 [Source:MGI Symbol;Acc:MGI:1913416]
name
S100a14 (ENSMUSG00000042306)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000199538
name
S100a14 (ENSMUSG00000042306)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000164481
name
S100a14 (ENSMUSG00000042306)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000167598
name
S100a14 (ENSMUSG00000042306)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17535.1
Uniprot/SWISSPROT:
Q9D2Q8
Vega_transcript:
OTTMUST00000132076
Vega_transcript:
S100a14-003
UCSC:uc012csy.1
Fantom:
1110013O05
Fantom:
2210421C05
EMBL:
AK003669
EMBL:
AK019075
EMBL:
BC025607
GO:
GO:0005509
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005886
GO:
GO:0006915
GO:
GO:0015630
GO:
GO:0030054
GO:
GO:0034142
GO:
GO:0042379
GO:
GO:0048471
GO:
GO:0070062
GO:
GO:0071624
GO:
GO:0090026
MGI_trans_name:
S100a14-003
Vega_translation:
187836
Vega_translation:
OTTMUSP00000070479
goslim_goa:
GO:0002376
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005856
goslim_goa:
GO:0005886
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0008219
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
AAH25607.1
protein_id:
BAB22927.1
protein_id:
BAB31533.1
OTTP:
OTTMUSP00000070479
OTTT:
OTTMUST00000132076
UniParc:
UPI0000026A2D
definition
note
: transcript_id=ENSMUST00000199538
protein_id
: ENSMUSP00000142428
translation
: MGQCRSANAEDAQEFSDVERAIETLIKNFHKYSVAGKKETLTPAELRDLVTQQLPHLMPSNCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVKMERPVTRS
name
S100a14 (ENSMUSG00000042306)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS50971.1
RefSeq_peptide:
NP_001156998
RefSeq_mRNA:
NM_001163526.2
Vega_transcript:
OTTMUST00000132077
Vega_transcript:
S100a14-004
Uniprot/SPTREMBL:
E9Q2K8
UCSC:uc012csz.1
EMBL:
AC160552
GO:
GO:0005509
MGI_trans_name:
S100a14-004
Vega_translation:
187837
Vega_translation:
OTTMUSP00000070480
goslim_goa:
GO:0003674
goslim_goa:
GO:0043167
OTTP:
OTTMUSP00000070480
OTTT:
OTTMUST00000132077
UniParc:
UPI00001F04FB
definition
note
: transcript_id=ENSMUST00000164481
protein_id
: ENSMUSP00000129862
translation
: MGQCRSANAESNCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVKMERPVTRS
name
S100a14 (ENSMUSG00000042306)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17535.1
Uniprot/SWISSPROT:
Q9D2Q8
RefSeq_peptide:
NP_001156997
RefSeq_peptide:
NP_079669
RefSeq_mRNA:
NM_001163525.2
RefSeq_mRNA:
NM_025393.4
Vega_transcript:
OTTMUST00000132078
Vega_transcript:
S100a14-001
UCSC:uc008qcv.2
Fantom:
1110013O05
Fantom:
2210421C05
EMBL:
AK003669
EMBL:
AK019075
EMBL:
BC025607
GO:
GO:0005509
GO:
GO:0005515
GO:
GO:0005654
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005737
GO:
GO:0005886
GO:
GO:0005886
GO:
GO:0006915
GO:
GO:0015630
GO:
GO:0015630
GO:
GO:0030054
GO:
GO:0030054
GO:
GO:0032496
GO:
GO:0034142
GO:
GO:0034142
GO:
GO:0042379
GO:
GO:0042379
GO:
GO:0042742
GO:
GO:0048471
GO:
GO:0048471
GO:
GO:0070062
GO:
GO:0070062
GO:
GO:0071624
GO:
GO:0071624
GO:
GO:0090026
GO:
GO:0090026
MGI_trans_name:
S100a14-001
Vega_translation:
187838
Vega_translation:
OTTMUSP00000070481
goslim_goa:
GO:0002376
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005856
goslim_goa:
GO:0005886
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0008219
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
AAH25607.1
protein_id:
BAB22927.1
protein_id:
BAB31533.1
OTTP:
OTTMUSP00000070481
OTTT:
OTTMUST00000132078
UniParc:
UPI0000026A2D
definition
note
: transcript_id=ENSMUST00000167598
protein_id
: ENSMUSP00000126821
translation
: MGQCRSANAEDAQEFSDVERAIETLIKNFHKYSVAGKKETLTPAELRDLVTQQLPHLMPSNCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVKMERPVTRS
name
type
misc_feature
link
xref
definition
note
: contig AC160552.13 33294..210051(1)
name
S100a14 (ENSMUSG00000042306)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000132079
Vega_transcript:
OTTMUST00000132079
MGI_trans_name:
S100a14-002
OTTT:
OTTMUST00000132079
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000200565
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.