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name
Pi4kb (ENSMUSG00000038861)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Pi4kb
note
: phosphatidylinositol 4-kinase, catalytic, beta polypeptide [Source:MGI Symbol;Acc:MGI:1334433]
name
Pi4kb (ENSMUSG00000038861)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000072287
name
Pi4kb (ENSMUSG00000038861)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000167008
name
Pi4kb (ENSMUSG00000038861)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000107251
name
Pi4kb (ENSMUSG00000038861)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000125476
name
Pi4kb (ENSMUSG00000038861)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000138209
name
Pi4kb (ENSMUSG00000038861)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17599.1
Uniprot/SWISSPROT:
Q8BKC8
RefSeq_peptide:
NP_780565
RefSeq_mRNA:
NM_175356.3
Vega_transcript:
OTTMUST00000047058
Vega_transcript:
Pi4kb-001
UCSC:uc008qhl.3
Fantom:
4732475N14
Fantom:
E130114L22
Fantom:
F830034P08
Fantom:
F930007M02
EMBL:
AK028974
EMBL:
AK053614
EMBL:
AK157918
EMBL:
AK172074
EMBL:
BC079846
EMBL:
BC113176
EMBL:
BC113781
EMBL:
BC138457
EMBL:
BC138458
EMBL:
CH466620
GO:
GO:0004430
GO:
GO:0005524
GO:
GO:0005737
GO:
GO:0005741
GO:
GO:0005794
GO:
GO:0006661
GO:
GO:0016020
GO:
GO:0030867
GO:
GO:0046854
GO:
GO:0048015
MGI_trans_name:
Pi4kb-001
Vega_translation:
188017
Vega_translation:
OTTMUSP00000021258
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0005783
goslim_goa:
GO:0005794
goslim_goa:
GO:0006629
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016301
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
AAH79846.1
protein_id:
AAI13177.1
protein_id:
AAI13782.1
protein_id:
AAI38458.1
protein_id:
AAI38459.1
protein_id:
BAC26222.1
protein_id:
BAC35448.1
protein_id:
BAE34263.1
protein_id:
BAE42812.1
protein_id:
EDL38762.1
OTTP:
OTTMUSP00000021258
OTTT:
OTTMUST00000047058
Reactome:
R-MMU-1430728
Reactome:
R-MMU-1483255
Reactome:
R-MMU-1483257
Reactome:
R-MMU-1660514
Reactome:
R-MMU-556833
UniParc:
UPI00000EA220
definition
note
: transcript_id=ENSMUST00000072287
protein_id
: ENSMUSP00000072134
translation
: MGDMVVEPATLKPTSEPTPSPSGNNGGSLLSVITEGVGELSVIDPEVAQKACQEVLEKVKLLHGGVAISSKGTPLELVNGDGVDNEIRCLDDPPAQIREEEDEMGAGVASGTAKGARRRRQNNSAKQSWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFYFRNEDVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSLQCALLLGAYSSDMHISTQRHSRGTKLRKLILSDELKPAHRKRELPTLSPAPDTGLSPSKRTHQRSKSDATASISLSSNLKRTASNPKVENEDEPVRLAPEREFIKSLMAIGKRLATLPTKEQKTQRLISELSLLNHKLPARVWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECENFDTTSVPARIPENRIRSTRSVENLPECGITHEQRAGSFSTVPNYDNDDEAWSVDDIGELQVELPEVHTNSCDNISQFSVDSITSQESKEPVFIAAGDIRRRLSEQLAHTPTAFKRDPEDPSAVALKEPWQEKVRRIREGSPYGHLPNWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIEPVVNAVSIHQVKKQSQLSLLDYFLQEHGSYTTEAFLSAQRNFVQSCAGYCLVCYLLQVKDRHNGNILLDAEGHIIHIDFGFILSSSPRNLGFETSAFKLTTEFVDVMGGLNGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIRNLKERFHMSMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM
name
Pi4kb (ENSMUSG00000038861)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Uniprot/SWISSPROT:
Q8BKC8
RefSeq_peptide:
NP_001280644
RefSeq_mRNA:
NM_001293715.1
Vega_transcript:
OTTMUST00000047059
Vega_transcript:
Pi4kb-002
UCSC:uc008qhm.3
Fantom:
4732475N14
Fantom:
E130114L22
Fantom:
F830034P08
Fantom:
F930007M02
EMBL:
AK028974
EMBL:
AK053614
EMBL:
AK157918
EMBL:
AK172074
EMBL:
BC079846
EMBL:
BC113176
EMBL:
BC113781
EMBL:
BC138457
EMBL:
BC138458
EMBL:
CH466620
GO:
GO:0004430
GO:
GO:0005524
GO:
GO:0005737
GO:
GO:0005741
GO:
GO:0005794
GO:
GO:0006661
GO:
GO:0016020
GO:
GO:0030867
GO:
GO:0046854
GO:
GO:0048015
MGI_trans_name:
Pi4kb-002
Vega_translation:
188019
Vega_translation:
OTTMUSP00000021259
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0005783
goslim_goa:
GO:0005794
goslim_goa:
GO:0006629
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016301
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
AAH79846.1
protein_id:
AAI13177.1
protein_id:
AAI13782.1
protein_id:
AAI38458.1
protein_id:
AAI38459.1
protein_id:
BAC26222.1
protein_id:
BAC35448.1
protein_id:
BAE34263.1
protein_id:
BAE42812.1
protein_id:
EDL38762.1
OTTP:
OTTMUSP00000021259
OTTT:
OTTMUST00000047059
Reactome:
R-MMU-1430728
Reactome:
R-MMU-1483255
Reactome:
R-MMU-1483257
Reactome:
R-MMU-1660514
Reactome:
R-MMU-556833
UniParc:
UPI00001F0876
definition
note
: transcript_id=ENSMUST00000107251
protein_id
: ENSMUSP00000102872
translation
: MGDMVVEPATLKPTSEPTPSPSGNNGGSLLSVITEGVGELSVIDPEVAQKACQEVLEKVKLLHGGVAISSKGTPLELVNGDGVDNEIRCLDDPPAQIREEEDEMGAGVASGTAKGARRRRQNNSAKQSWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFYFRNEDVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSLQCALLLGAYSSDMHISTQRHSRGTKLRKLILSDELKPAHRKRELPTLSPAPDTGLSPSKRTHQRSKSDATASISLSSNLKRTASNPKVENEDEELSSSTESIDNSFSSPVRLAPEREFIKSLMAIGKRLATLPTKEQKTQRLISELSLLNHKLPARVWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECENFDTTSVPARIPENRIRSTRSVENLPECGITHEQRAGSFSTVPNYDNDDEAWSVDDIGELQVELPEVHTNSCDNISQFSVDSITSQESKEPVFIAAGDIRRRLSEQLAHTPTAFKRDPEDPSAVALKEPWQEKVRRIREGSPYGHLPNWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIEPVVNAVSIHQVKKQSQLSLLDYFLQEHGSYTTEAFLSAQRNFVQSCAGYCLVCYLLQVKDRHNGNILLDAEGHIIHIDFGFILSSSPRNLGFETSAFKLTTEFVDVMGGLNGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIRNLKERFHMSMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM
name
Pi4kb (ENSMUSG00000038861)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000082653
Vega_transcript:
Pi4kb-005
Uniprot/SPTREMBL:
E9Q8A3
UCSC:uc008qhm.3
EMBL:
AC087062
GO:
GO:0004430
GO:
GO:0005737
GO:
GO:0006661
GO:
GO:0016020
GO:
GO:0046854
GO:
GO:0048015
MGI_trans_name:
Pi4kb-005
Vega_translation:
188020
Vega_translation:
OTTMUSP00000044334
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0006629
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016301
OTTP:
OTTMUSP00000044334
OTTT:
OTTMUST00000082653
UniParc:
UPI0001889B0A
definition
note
: transcript_id=ENSMUST00000125476
protein_id
: ENSMUSP00000121965
translation
: MKFLEARSLAVAMGDMVVEPATLKPTSEPTPSPSGNNGGSLLSVITEGVGELSVIDPEVAQKACQEVLEKVKLLHGGVAISSKGTPLELVNGDGVDNEIRCLDDPPAQIREEEDEMGAGVASGTAKGARRRRQNNSAKQSWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFYFRNEDVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSLQCALLLGAYSSDMHISTQRHSRGTKLRKLILSDELKPAHRKRELPTLSPAPDTGLSPSKRTHQRSKSDATASISLSSNLKRTASNPKVENEDEELSSSTESIDNSFSSPVRLAPEREFIKSLMAIGKRLATLPTKEQKTQRLISELSLLNHKLPARVWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECENFDTTSVPARIPENRIRSTRSVENLPECGITHEQRAGSFSTVPNYDNDDEAWSVDDIGELQVELPEVHTNSCDNISQFSVDSITSQESKEPVFIAAGDIRRRLSEQLAHTPTAFKRDPEDPSAVALKEPWQEKVRRIREGSPYGHLPNWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIEPVVNAVSIHQVKKQSQLSLLDYFLQEHGSYTTEAFLSAQRNFVQSCAGYCLVCYLLQVKDRHNGNILLDAEGHIIHIDFGFILSSSPRNLGFETSAFKLTTEFVDVMGGLNGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIRNLKERFHMSMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM
name
type
misc_feature
link
xref
definition
note
: contig AC087062.25 22953..224451(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.