VariantTable
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BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Pip5k1a (ENSMUSG00000028126)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Pip5k1a
note
: phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha [Source:MGI Symbol;Acc:MGI:107929]
name
Pip5k1a (ENSMUSG00000028126)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000107236
name
Pip5k1a (ENSMUSG00000028126)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000107233
name
Pip5k1a (ENSMUSG00000028126)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000107232
name
Pip5k1a (ENSMUSG00000028126)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000005768
name
Pip5k1a (ENSMUSG00000028126)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS38542.1
Uniprot/SWISSPROT:
P70182
RefSeq_peptide:
NP_032873
RefSeq_mRNA:
NM_008847.3
Vega_transcript:
OTTMUST00000047070
Vega_transcript:
Pip5k1a-002
UCSC:uc008qhx.3
Fantom:
F930023N02
Fantom:
I830018A01
Fantom:
I830044I19
EMBL:
AC087062
EMBL:
AC131769
EMBL:
AK150898
EMBL:
AK151984
EMBL:
AK158062
EMBL:
BC003763
EMBL:
BC031774
EMBL:
D86177
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005524
GO:
GO:0005634
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005737
GO:
GO:0005847
GO:
GO:0005847
GO:
GO:0005886
GO:
GO:0005886
GO:
GO:0005925
GO:
GO:0005925
GO:
GO:0008654
GO:
GO:0008654
GO:
GO:0010761
GO:
GO:0016308
GO:
GO:0016308
GO:
GO:0016607
GO:
GO:0016607
GO:
GO:0019900
GO:
GO:0019900
GO:
GO:0030027
GO:
GO:0030027
GO:
GO:0031532
GO:
GO:0031532
GO:
GO:0032587
GO:
GO:0032587
GO:
GO:0046488
GO:
GO:0046854
GO:
GO:0048041
GO:
GO:0048041
GO:
GO:0060326
GO:
GO:0060326
GO:
GO:0072661
GO:
GO:0072661
GO:
GO:0090630
GO:
GO:0090630
GO:
GO:0097178
GO:
GO:0097178
MGI_trans_name:
Pip5k1a-002
Vega_translation:
188032
Vega_translation:
OTTMUSP00000021264
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005886
goslim_goa:
GO:0006605
goslim_goa:
GO:0006629
goslim_goa:
GO:0006810
goslim_goa:
GO:0007009
goslim_goa:
GO:0007010
goslim_goa:
GO:0007155
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016301
goslim_goa:
GO:0019899
goslim_goa:
GO:0022607
goslim_goa:
GO:0034330
goslim_goa:
GO:0040011
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048870
goslim_goa:
GO:0061024
protein_id:
AAH03763.1
protein_id:
AAH31774.1
protein_id:
BAA13031.1
protein_id:
BAE29943.1
protein_id:
BAE30850.1
protein_id:
BAE34344.1
OTTP:
OTTMUSP00000021264
OTTT:
OTTMUST00000047070
Reactome:
R-MMU-1430728
Reactome:
R-MMU-1483255
Reactome:
R-MMU-1483257
Reactome:
R-MMU-1660499
Reactome:
R-MMU-556833
UniParc:
UPI0000020EDA
definition
note
: transcript_id=ENSMUST00000107236
protein_id
: ENSMUSP00000102855
translation
: MASASSGPAAAGFSSLDAGAPAGTAAASGIKRATVSEGPSASVMPVKKIGHRSVDSSGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHMKYDLKGSTYKRRASQKEREKTLPTFKDLDFLQDIPDGLFLDADMYSALCKTLQRDCLVLQSFKIMDYSLLMSIHNMDHAQREPTSNDTQYSADTRRPAPQKALYSTAMESIQGEARRGGTVETEDHMGGIPARNNKGERLLLYIGIIDILQSYRFVKKLEHSWKALVHDGDTVSVHRPGFYAERFQRFMCNTVFKKIPLKPSPTKKFRSGPSFSRRSGPSGNSCTSQLMASGEHRAQVTTKAEVEPDVHLGRPDVLPQTPPLEEISEGSPVPGPSFSPVVGQPLQILNLSSTLEKLDVAESEFTH
name
Pip5k1a (ENSMUSG00000028126)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Uniprot/SWISSPROT:
P70182
RefSeq_peptide:
NP_001280636
RefSeq_mRNA:
NM_001293707.1
Vega_transcript:
OTTMUST00000047069
Vega_transcript:
Pip5k1a-001
UCSC:uc008qhy.3
Fantom:
F930023N02
Fantom:
I830018A01
Fantom:
I830044I19
EMBL:
AC087062
EMBL:
AC131769
EMBL:
AK150898
EMBL:
AK151984
EMBL:
AK158062
EMBL:
BC003763
EMBL:
BC031774
EMBL:
D86177
GO:
GO:0005515
GO:
GO:0005524
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005847
GO:
GO:0005886
GO:
GO:0005925
GO:
GO:0008654
GO:
GO:0010761
GO:
GO:0016308
GO:
GO:0016607
GO:
GO:0019900
GO:
GO:0030027
GO:
GO:0031532
GO:
GO:0032587
GO:
GO:0046488
GO:
GO:0046854
GO:
GO:0048041
GO:
GO:0060326
GO:
GO:0072661
GO:
GO:0090630
GO:
GO:0097178
MGI_trans_name:
Pip5k1a-001
Vega_translation:
188033
Vega_translation:
OTTMUSP00000021263
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005886
goslim_goa:
GO:0006605
goslim_goa:
GO:0006629
goslim_goa:
GO:0006810
goslim_goa:
GO:0007009
goslim_goa:
GO:0007010
goslim_goa:
GO:0007155
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016301
goslim_goa:
GO:0019899
goslim_goa:
GO:0022607
goslim_goa:
GO:0034330
goslim_goa:
GO:0040011
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048870
goslim_goa:
GO:0061024
protein_id:
AAH03763.1
protein_id:
AAH31774.1
protein_id:
BAA13031.1
protein_id:
BAE29943.1
protein_id:
BAE30850.1
protein_id:
BAE34344.1
OTTP:
OTTMUSP00000021263
OTTT:
OTTMUST00000047069
Reactome:
R-MMU-1430728
Reactome:
R-MMU-1483255
Reactome:
R-MMU-1483257
Reactome:
R-MMU-1660499
Reactome:
R-MMU-556833
UniParc:
UPI0000D8B390
definition
note
: transcript_id=ENSMUST00000107233
protein_id
: ENSMUSP00000102852
translation
: MASASSGPAAAGFSSLDAGAPAGTAAAASGIKRATVSEGPSASVMPVKKIGHRSVDSSGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHMKYDLKGSTYKRRASQKEREKTLPTFKDLDFLQDIPDGLFLDADMYSALCKTLQRDCLVLQSFKIMDYSLLMSIHNMDHAQREPTSNDTQYSADTRRPAPQKALYSTAMESIQGEARRGGTVETEDHMGGIPARNNKGERLLLYIGIIDILQSYRFVKKLEHSWKALVHDGDTVSVHRPGFYAERFQRFMCNTVFKKIPLKPSPTKKFRSGPSFSRRSGPSGNSCTSQLMASGEHRAQVTTKAEVEPDVHLGRPDVLPQTPPLEEISEGSPVPGPSFSPVVGQPLQILNLSSTLEKLDVAESEFTH
name
Pip5k1a (ENSMUSG00000028126)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000055692
Vega_transcript:
Pip5k1a-009
Uniprot/SPTREMBL:
D3YUY3
UCSC:uc008qhx.3
EMBL:
AC087062
EMBL:
AC131769
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005847
GO:
GO:0005886
GO:
GO:0005925
GO:
GO:0008654
GO:
GO:0010761
GO:
GO:0016308
GO:
GO:0016607
GO:
GO:0019900
GO:
GO:0030027
GO:
GO:0031532
GO:
GO:0032587
GO:
GO:0046488
GO:
GO:0046854
GO:
GO:0048041
GO:
GO:0060326
GO:
GO:0072661
GO:
GO:0090630
GO:
GO:0097178
MGI_trans_name:
Pip5k1a-009
Vega_translation:
188034
Vega_translation:
OTTMUSP00000026703
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005886
goslim_goa:
GO:0006605
goslim_goa:
GO:0006629
goslim_goa:
GO:0006810
goslim_goa:
GO:0007009
goslim_goa:
GO:0007010
goslim_goa:
GO:0007155
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016301
goslim_goa:
GO:0019899
goslim_goa:
GO:0022607
goslim_goa:
GO:0034330
goslim_goa:
GO:0040011
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048870
goslim_goa:
GO:0061024
OTTP:
OTTMUSP00000026703
OTTT:
OTTMUST00000055692
UniParc:
UPI0001889B0F
definition
note
: transcript_id=ENSMUST00000107232
protein_id
: ENSMUSP00000102851
translation
: MASASSGPAAAGFSSLDAGAPAGTAASGIKRATVSEGPSASVMPVKKIGHRSVDSSGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHMKYDLKGSTYKRRASQKEREKTLPTFKDLDFLQDIPDGLFLDADMYSALCKTLQRDCLVLQSFKIMDYSLLMSIHNMDHAQREPTSNDTQYSADTRRPAPQKALYSTAMESIQGEARRGGTVETEDHMGGIPARNNKGERLLLYIGIIDILQSYRFVKKLEHSWKALVHDGDTVSVHRPGFYAERFQRFMCNTVFKKIPYVHLGRPDVLPQTPPLEEISEGSPVPGPSFSPVVGQPLQILNLSSTLEKLDVAESEFTH
name
Pip5k1a (ENSMUSG00000028126)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000047072
Vega_transcript:
Pip5k1a-004
Uniprot/SPTREMBL:
F8WI18
UCSC:uc008qhx.3
EMBL:
AC087062
EMBL:
AC131769
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005847
GO:
GO:0005886
GO:
GO:0005925
GO:
GO:0008654
GO:
GO:0010761
GO:
GO:0016308
GO:
GO:0016607
GO:
GO:0019900
GO:
GO:0030027
GO:
GO:0031532
GO:
GO:0032587
GO:
GO:0046488
GO:
GO:0046854
GO:
GO:0048041
GO:
GO:0060326
GO:
GO:0072661
GO:
GO:0090630
GO:
GO:0097178
MGI_trans_name:
Pip5k1a-004
Vega_translation:
188035
Vega_translation:
OTTMUSP00000021265
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005886
goslim_goa:
GO:0006605
goslim_goa:
GO:0006629
goslim_goa:
GO:0006810
goslim_goa:
GO:0007009
goslim_goa:
GO:0007010
goslim_goa:
GO:0007155
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016301
goslim_goa:
GO:0019899
goslim_goa:
GO:0022607
goslim_goa:
GO:0034330
goslim_goa:
GO:0040011
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048870
goslim_goa:
GO:0061024
OTTP:
OTTMUSP00000021265
OTTT:
OTTMUST00000047072
UniParc:
UPI0000F22249
definition
note
: transcript_id=ENSMUST00000005768
protein_id
: ENSMUSP00000005768
translation
: MASASSGPAAAGFSSLDAGAPAGTAASGIKRATVSEGPSASVMPVKKIGHRSVDSSGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHMKYDLKGSTYKRRASQKEREKTLPTFKDLDFLQDIPDGLFLDADMYSALCKTLQRDCLVLQSFKIMDYSLLMSIHNMDHAQREPTSNDTQYSADTRRPAPQKALYSTAMESIQGEARRGGTVETEDHMGGIPARNNKGERLLLYIGIIDILQSYRFVKKLEHSWKALVHDGDTVSVHRPGFYAERFQRFMCNTVFKKIPLKPSPTKKFRSGPSFSRRSGPSGNSCTSQLMASGEHRAQVTTKAEVEPDVHLGRPDVLPQTPPLEEISEGSPVPGPSFSPVVGQPLQILNLSSTLEKLDVAESEFTH
name
type
misc_feature
link
xref
definition
note
: contig AC131769.3 50282..148675(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.