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name
Ecm1 (ENSMUSG00000028108)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Ecm1
note
: extracellular matrix protein 1 [Source:MGI Symbol;Acc:MGI:103060]
name
Ecm1 (ENSMUSG00000028108)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000117507
name
Ecm1 (ENSMUSG00000028108)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000029753
name
Ecm1 (ENSMUSG00000028108)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17619.1
Uniprot/SWISSPROT:
Q61508
RefSeq_peptide:
NP_031925
RefSeq_mRNA:
NM_007899.2
RefSeq_peptide_predicted:
XP_006501048.1
RefSeq_peptide_predicted:
XP_011238311.1
Vega_transcript:
Ecm1-001
Vega_transcript:
OTTMUST00000075058
UCSC:uc008qko.2
Fantom:
I830113N15
Fantom:
I830164H04
EMBL:
AK153009
EMBL:
AK153471
EMBL:
L33416
GO:
GO:0001503
GO:
GO:0001525
GO:
GO:0001938
GO:
GO:0001938
GO:
GO:0001960
GO:
GO:0002020
GO:
GO:0002020
GO:
GO:0002828
GO:
GO:0004871
GO:
GO:0004871
GO:
GO:0005134
GO:
GO:0005515
GO:
GO:0005578
GO:
GO:0005615
GO:
GO:0006357
GO:
GO:0006954
GO:
GO:0007165
GO:
GO:0007165
GO:
GO:0008022
GO:
GO:0008022
GO:
GO:0010466
GO:
GO:0010466
GO:
GO:0019899
GO:
GO:0019899
GO:
GO:0030502
GO:
GO:0030502
GO:
GO:0031012
GO:
GO:0031012
GO:
GO:0031214
GO:
GO:0043123
GO:
GO:0043123
GO:
GO:0043236
GO:
GO:0043236
GO:
GO:0045766
GO:
GO:0045766
GO:
GO:0070062
GO:
GO:0070062
GO:
GO:2000404
MGI_trans_name:
Ecm1-001
Vega_translation:
188105
Vega_translation:
OTTMUSP00000039277
goslim_goa:
GO:0003674
goslim_goa:
GO:0004871
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005578
goslim_goa:
GO:0005615
goslim_goa:
GO:0006950
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0019899
goslim_goa:
GO:0043226
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
protein_id:
AAA37535.1
protein_id:
BAE31648.1
protein_id:
BAE32022.1
OTTP:
OTTMUSP00000039277
OTTT:
OTTMUST00000075058
UniParc:
UPI0000022DC5
definition
note
: transcript_id=ENSMUST00000117507
protein_id
: ENSMUSP00000112665
translation
: MGTVSRAALILACLALASAASEGAFKASDQREMTPERLFQHLHEVGYAAPPSPPQTRRLRVDHSVTSLHDPPLFEEQREVQPPSSPEDIPVYEEDWPTFLNPNVDKAGPAVPQEAIPLQKEQPPPQVHIEQKEIDPPAQPQEEIVQKEVKPHTLAGQLPPEPRTWNPARHCQQGRRGVWGHRLDGFPPGRPSPDNLKQICLPERQHVIYGPWNLPQTGYSHLSRQGETLNVLETGYSRCCRCRSDTNRLDCLKLVWEDAMTQFCEAEFSVKTRPHLCCRLRGEERFSCFQKEAPRPDYLLRPCPVHQNGMSSGPQLPFPPGLPTPDNVKNICLLRRFRAVPRNLPATDAIQRQLQALTRLETEFQRCCRQGHNHTCTWKAWEGTLDGYCERELAIKTHPHSCCHYPPSPARDECFAHLAPYPNYDRDILTLDLSRVTPNLMGQLCGSGRVLSKHKQIPGLIQNMTIRCCELPYPEQACCGEEEKLAFIENLCGPRRNSWKDPALCCDLSPEDKQINCFNTNYLRNVALVAGDTGNATGLGEQGPTRGTDANPAPGSKEE
name
Ecm1 (ENSMUSG00000028108)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS57237.1
RefSeq_peptide:
NP_001239582
RefSeq_mRNA:
NM_001252653.1
RefSeq_peptide_predicted:
XP_006501047.1
RefSeq_peptide_predicted:
XP_011238310.1
Vega_transcript:
Ecm1-002
Vega_transcript:
OTTMUST00000075059
Uniprot/SPTREMBL:
F8WI14
UCSC:uc008qkp.2
EMBL:
AC093317
GO:
GO:0001938
GO:
GO:0001960
GO:
GO:0002020
GO:
GO:0002828
GO:
GO:0004871
GO:
GO:0005134
GO:
GO:0005615
GO:
GO:0006357
GO:
GO:0006954
GO:
GO:0007165
GO:
GO:0008022
GO:
GO:0010466
GO:
GO:0019899
GO:
GO:0030502
GO:
GO:0031012
GO:
GO:0043123
GO:
GO:0043236
GO:
GO:0045766
GO:
GO:0070062
GO:
GO:2000404
MGI_trans_name:
Ecm1-002
Vega_translation:
188106
Vega_translation:
OTTMUSP00000039278
goslim_goa:
GO:0003674
goslim_goa:
GO:0004871
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005615
goslim_goa:
GO:0006950
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0019899
goslim_goa:
GO:0043226
OTTP:
OTTMUSP00000039278
OTTT:
OTTMUST00000075059
UniParc:
UPI000164C474
definition
note
: transcript_id=ENSMUST00000029753
protein_id
: ENSMUSP00000029753
translation
: MGTVSRAALILACLALASAASEGAFKASDQREMTPERLFQHLHEVGYAAPPSPPQTRRLRVDHSVTSLHDPPLFEEQREVQPPSSPEDIPVYEEDWPTFLNPNVDKAGPAVPQEAIPLQKEQPPPQVHIEQKENPPAQPQEEIVQKEVKPHTLAGQLPPEPRTWNPARHCQQGRRGVWGHRLDGFPPGRPSPDNLKQICLPERQHVIYGPWNLPQTGYSHLSRQGETLNVLETGYSRCCRCRSDTNRLDCLKLVWEDAMTQFCEAEFSVKTRPHLCCRLRGEERFSCFQKEAPRPDYLLRPCPVHQNGMSSGPQLPFPPGLPTPDNVKNICLLRRFRAVPRNLPATDAIQRQLQALTRLETEFQRCCRQGHNHTCTWKAWEGTLDGYCERELAIKTHPHSCCHYPPSPARDECFAHLAPYPNYDRDILTLDLSRVTPNLMGQLCGSGRVLSKHKQIPGLIQNMTIRCCELPYPEQACCGEEEKLAFIENLCGPRRNSWKDPALCCDLSPEDKQINCFNTNYLRNVALVAGDTGNATGLGEQGPTRGTDANPAPGSKEE
name
type
misc_feature
link
xref
definition
note
: contig AC093317.22 107890..139244(-1)
name
Ecm1 (ENSMUSG00000028108)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000075067
Vega_transcript:
OTTMUST00000075067
MGI_trans_name:
Ecm1-010
OTTT:
OTTMUST00000075067
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000144958
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.