VariantTable
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On read coverage region : Click to browse alignment view.
name
Phgdh (ENSMUSG00000053398)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Phgdh
note
: 3-phosphoglycerate dehydrogenase [Source:MGI Symbol;Acc:MGI:1355330]
name
Phgdh (ENSMUSG00000053398)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000065793
name
Phgdh (ENSMUSG00000053398)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS17663.1
Uniprot/SWISSPROT:
Q61753
RefSeq_peptide:
NP_058662
RefSeq_mRNA:
NM_016966.3
Vega_transcript:
OTTMUST00000065092
Vega_transcript:
Phgdh-001
UCSC:uc008qps.1
Fantom:
4930479N23
Fantom:
E430007J06
EMBL:
AB128936
EMBL:
AK076815
EMBL:
AK169684
EMBL:
BC086668
EMBL:
BC110673
EMBL:
L21027
GO:
GO:0004617
GO:
GO:0004617
GO:
GO:0006541
GO:
GO:0006544
GO:
GO:0006563
GO:
GO:0006564
GO:
GO:0006566
GO:
GO:0009448
GO:
GO:0010468
GO:
GO:0019530
GO:
GO:0021510
GO:
GO:0021782
GO:
GO:0021915
GO:
GO:0022008
GO:
GO:0031175
GO:
GO:0043209
GO:
GO:0051287
GO:
GO:0055114
GO:
GO:0070062
GO:
GO:0070062
GO:
GO:0070314
MGI_trans_name:
Phgdh-001
Vega_translation:
188262
Vega_translation:
OTTMUSP00000032394
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005623
goslim_goa:
GO:0006520
goslim_goa:
GO:0006790
goslim_goa:
GO:0007049
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0009790
goslim_goa:
GO:0016491
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0044281
goslim_goa:
GO:0048856
protein_id:
AAB67986.1
protein_id:
AAH86668.1
protein_id:
AAI10674.1
protein_id:
BAC36494.1
protein_id:
BAD08449.1
protein_id:
BAE41303.1
OTTP:
OTTMUSP00000032394
OTTT:
OTTMUST00000065092
Reactome:
R-MMU-1430728
Reactome:
R-MMU-70614
Reactome:
R-MMU-71291
Reactome:
R-MMU-977347
UniParc:
UPI0000237ED2
definition
note
: transcript_id=ENSMUST00000065793
protein_id
: ENSMUSP00000064755
translation
: MAFANLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWDRKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTVGYDPIISPEVAASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDSTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTGVVNAQALTSAFSPHTKPWIGLAEAMGTLMHAWAGSPKGTIQVVTQGTSLKNAGTCLSPAVIVGLLREASKQADVNLVNAKLLVKEAGLNVTTSHNPGVPGEQGSGECLLTVALAGAPYQAVGLVQGTTPMLQMLNGAVFRPEVPLRRGQPLLVFRAQPSDPGMLPTMIGLLAEAGVQLLSYQTSMVSDGEPWHVMGLSSLLPSLETWKQHVLEAFQFCF
name
type
misc_feature
link
xref
definition
note
: contig AC147476.3 1..84191(-1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
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show
JF1v3 :
not show
show
KJRv1 :
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show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.