BAC Information

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BAC

Clone NameB6Ng01-001G06
Chromosome1 (Build37)
Map Location 152,712,985 - 152,713,728
singlet/doubletsinglet
Overlap genenone
Upstream genePla2g4a, Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534
Downstream geneEG545370, LOC668040, LOC676758, EG668050, LOC668055, 3110040M04Rik, LOC100043286, Ivns1abp, 1200016B10Rik, 1190005F20Rik, Rnf2, Niban, Edem3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001G06.bB6Ng01-001G06.g
ACCDH839726DH839727
length7441,225
definitionDH839726|Mus musculus domesticus DNA, BAC clone: B6Ng01-001G06, 5' end.DH839727|Mus musculus domesticus DNA, BAC clone: B6Ng01-001G06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctactaatattgactatgtatatttcaaagttcaatgaaaaag
acacagaaaatttataaaatcagaccctttctattacatgctttgggaat
tgttcaaatagctatattatgtagttcacctctaccctagctttaatcca
tgtaggtgcgtgtctccgtggttttaagtgatatatttaggttacacagt
catggctattttctcctgttaactattaaacttcactgcatatccaagag
ggaaagaaggagggaagaaagagaagacagagggggaggaagaggaggaa
cagtatgagagcaaagacagaaaacttttcataaacttacaagaaacata
aatagaaatatatgtaagtataggtatatgtacatgcatgcatatttctt
tatatggatgcctacacgcatgtgtgtatatgtttactttcccagtcata
attaaagatccatttgattcttgtacgtttagagggttccttcccctctg
gaaccatatcacttgaaatcataaaagttgattttgaaggacgttcacat
gccatacatacagcaagtgcacatctctcaagatcgccccacccctcacc
ccggtctttttcgagggttggaggaagcaaatattttatttctgcttgat
cttgtataccctctcgaacagaagaaacccatggcaagagactgaaacct
ggaggcaggactacttagtggagtgcatgcgagagagggtgctt
gaattccaagcaacactatctgaactggaatttgctaagatttgtcacaa
ctgatgatggtttaaaaaataaataaataaaatggaagcaagaaaagaat
tagtgaagtgtccagagcttagatgtgtggagtttaaacatctgtgcacc
atgactgtatcattgcttagcaagtcctacgtgcagaatggctgtgtgtt
aatgagcccctggtgccaatggtgtgttttatttgttgttactgacatgg
acaccagtaatcctgtgaccctcccaagaagccgaactgaatacccaggc
atatggcagctgcctgccttggcatttgtgatgtttcatttgttaagttc
atgatagagactaaatgtctttcttttttttctcaatgaaaagaggtagg
tttaaatattgttaccaagtgctgaagaactttagaaattcattttgttt
taaatactgtttttcattcatttcaatttaaaattacaatgcaagacact
aaatatgaaatattagtattgtagtggttatttgattctttcaaattcaa
ggagtgtaaggctacttaatacattggctgtcaaaagttcacattagaac
tgagatctttattcacccacatttttattttatcttctgaatccaaacaa
ctattctaccaatgtttgatatagatgcaagagtccatatcccagacatc
ccaatttattcttgacacagaatcttccatatagtttttaactagaattg
attaattgcacatttgtaatggaatgctaaaaagcaaatatcaaaagagt
acaatcaagtgttataaattcttttgtggaaatgaatgtattcagtaaaa
gtcatgttaagcccttacggtcgcgccaccctgggtcaccttgggttgag
agtcagcagaatccctcaagtcttgagaggacttttcctcactatcttag
accaccagtgagtggaacacaactgatgttccactccagttcacgggacc
tgagacagcattagagaatgcgaaaacccgtcctgaccagggttcacaag
ccccttccagtcgggcagaacgggtcacctggggcatgagttggaagaca
ctctagtgcttagacacttctgaggccgaccccttcagcttcgaatatcg
gaccttccagttaagacagttctcccactagaagcttgattatctggaat
acttcttgtttccggactcctctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_152712985_152713728
seq2: B6Ng01-001G06.b_43_786 (reverse)

seq1  AAGCACCCTTCCCCGCATGCACTCCCACT--GTAGTCCTGCCTCCAGGTT  48
      |||||||||  | |||||||||| |||||  |||||||||||||||||||
seq2  AAGCACCCTCTCTCGCATGCACT-CCACTAAGTAGTCCTGCCTCCAGGTT  49

seq1  TCAGTCTCTTGCCCTGGGTTTCTTCTGTTCGTGAGGGACTACAAGATGTA  98
      ||||||||||||| ||||||||||||||||| |||||  ||||||||  |
seq2  TCAGTCTCTTGCCATGGGTTTCTTCTGTTCGAGAGGGTATACAAGAT-CA  98

seq1  AGCTGAAATAAACTCTTTGCTTCCCCCAACCCTCGAAAAAGACCGGGGTG  148
      ||| |||||||| | ||||||||| |||||||||||||||||||||||||
seq2  AGCAGAAATAAAATATTTGCTTCCTCCAACCCTCGAAAAAGACCGGGGTG  148

seq1  AGGGGTGGGGAGATCTTGAGAGAAGTGCACTTGCTGTATCTATCGCATCT  198
      |||||||||| |||||||||||| ||||||||||||||| ||| |||| |
seq2  AGGGGTGGGGCGATCTTGAGAGATGTGCACTTGCTGTATGTATGGCATGT  198

seq1  GAACGTCCTTCAAAATCAACCTCTCTGATTTCAAGTGATATCGTTCCAGA  248
      |||||||||||||||||||| | | |||||||||||||||| ||||||||
seq2  GAACGTCCTTCAAAATCAACTTTTATGATTTCAAGTGATATGGTTCCAGA  248

seq1  GCTGAAGGAACCCTCTAAACGTACAAGAATGAAATGGCTCTTTAATTATG  298
      |  ||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  GGGGAAGGAACCCTCTAAACGTACAAGAATCAAATGGATCTTTAATTATG  298

seq1  ACTGGGAAAGTAAACATATACACACATGTGTGTAGGCATCCATATAAAGA  348
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACTGGGAAAGTAAACATATACACACATGCGTGTAGGCATCCATATAAAGA  348

seq1  AATATGCATGCATGTACATATACCTATACTTACATATATTTCTATTTATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCATGCATGTACATATACCTATACTTACATATATTTCTATTTATG  398

seq1  TTTCTTGTAAGTTTATGAAAAGTTTTCTGTCTTTGCTCTCATACTGTTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTAAGTTTATGAAAAGTTTTCTGTCTTTGCTCTCATACTGTTCC  448

seq1  TCCTCTTCCTCCCCCTCTGTCTTCTCTTTCTTCCCTCCTTCTTTCCCTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCCTCCCCCTCTGTCTTCTCTTTCTTCCCTCCTTCTTTCCCTCT  498

seq1  TGGATATGCAGTGAAGTTTAATAGTTAACAGGAGAAAATAGCCATGACTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATGCAGTGAAGTTTAATAGTTAACAGGAGAAAATAGCCATGACTG  548

seq1  TGTAACCTAAATATATCACTTAAAACCACGGAGACACGCACCTACATGGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCTAAATATATCACTTAAAACCACGGAGACACGCACCTACATGGA  598

seq1  TTAAAGCTAGGGTAGAGGTGAACTACATAATATAGCTATTTGAACAATTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCTAGGGTAGAGGTGAACTACATAATATAGCTATTTGAACAATTC  648

seq1  CCAAAGCATGTAATAGAAAGGGTCTGATTTTATAAATTTTCTGTGTCTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCATGTAATAGAAAGGGTCTGATTTTATAAATTTTCTGTGTCTTT  698

seq1  TTCATTGAACTTTGAAATATACATAGTCAATATTAGTAGAGAATTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGAACTTTGAAATATACATAGTCAATATTAGTAGAGAATTC  744