BAC Information

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BAC

Clone NameB6Ng01-001M02
Chromosome1 (Build37)
Map Location 112,078,436 - 112,079,171
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666508, Cdh7
Downstream geneLOC100041429, EG626652, Cdh19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001M02.bB6Ng01-001M02.g
ACCDH839986DH839987
length1,225736
definitionDH839986|Mus musculus domesticus DNA, BAC clone: B6Ng01-001M02, 5' end.DH839987|Mus musculus domesticus DNA, BAC clone: B6Ng01-001M02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctatgagccccattttttaatggggttatttgatt
tttttggagtccaccttcttgagttctttataaatatatatattggatat
tagtcctctatctgatttaggataggtaaagatcctttcccaatctgttg
gtggtctttttgtcttgttgatggtgtcttttgccttaccgaagctttgc
agtttcatgaggtcccatttgtcaattctctatcttacagcacaagtcat
tgctgttctattcaggaatttttcccctgtgccaatgtgctgcccatttt
ctccctacctattcaacattgtacttgaagtcctagccagagcaatttga
caacaaaatatcaatatatatcatatatatgatatcaaggggatacaaat
tggaaaagaagaagtcaaaatatcacattttgcagatgatatgatagtat
atataagtgaccctaaatattccaccagagaaatcctaagcctgataaac
agcttcaatgaagtagctggatataaaattaactcgaacaagtcaatggc
ctttctctcaaagaataaacaggctgagaaagaaattagtgaaacaacat
cctcctcaattgtcacaaataatataaaataccttggcatgactctaact
aaggaagtaaaagatctgtatgataagaacttcaagtctctgaagaaaga
aattaaagaagatctcagaagatggaaagatctcccatgttcatggattg
gcaggatcaacattgtaaaaatggctatcttgccaaaagcaatctataga
ttcaatgcaatccccatcaaaattccaactcaattcttcaacgaattaga
aagagcaatctgcaaattcatctggaataacaaaaacctaggatagcaaa
aactcttctcaaggataaaataacctttgggtggaatcaccatgcctgac
ctaaagctttactatagagcattgtgatcaatggcatggtactggtatat
gacagaaaaatagacaatggataggattgagaccagaatgactcaatact
atggtcacttgattttacagggagctaaattatcagtggaaaaagaaagc
atttcacaatggtgcttgcatatggtgctatctgtagagattgattgatt
catccatcttgtaccagtcatctaattggatcaggacccttataaccgtg
agagaacacctcgtgaaactctcta
gaattccaagtgttgctcaacacaaaatgtgctgccaaggaattctgtaa
gagaattgaactcgtgtctttagagaaggaggaggaaagaaatgtgtcaa
ctgatctaaagaggatgtgtttgtgcttaattattatataaattacaaac
ttgtaccagatacctaagcattcaacaaaacttttgtaaatattatattt
ttcttctgtattttaagtgtgcataaatttgtgctgcctccataaaagga
gtggttagcaatggatgtcttcccaggcatctctttatcttaattttaaa
gttaggcactcatgatccctggaactttctcttgcacctacacataatat
ctagctctctgtttgaaatgcaactgtgtatgccataaagaactgaaatt
acaggtatatattgtcatgccagactttttagataggtcctaggtataca
aactcagtgtctcaggcttatacaaaaggtttatccgaaaattggaaatt
gctctctatgaagaactagctataccactacttggaatatatccaaaaga
agctaccatatatagaaagggcatatgttccacatttttatagcacccgt
acttataatatccagaagctggaaacaacccatatgttcctcaacaaaag
aacggatacggataatccggtaaatttacacaatggaatactacttagct
attataaatgatgacttcacaactttttcaggcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_112078436_112079171
seq2: B6Ng01-001M02.g_67_802 (reverse)

seq1  TTTGCCTGCAAAAGTTGTGAAGTCATCATTTATAATAGCTAAGTAGTATT  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTGAAAAAGTTGTGAAGTCATCATTTATAATAGCTAAGTAGTATT  50

seq1  CCATTGTGTAAATTTACCGGATTATCCGTATCCGTTCTTTTGTTGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTGTAAATTTACCGGATTATCCGTATCCGTTCTTTTGTTGAGGAA  100

seq1  CATCTGGGTTGTTTCCAGCTTCTGGATATTATAAGTACGGGTGCTATAAA  150
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGGTTGTTTCCAGCTTCTGGATATTATAAGTACGGGTGCTATAAA  150

seq1  AATGTGGAACATATGCCCTTTCTATATATGGTAGCTTCTTTTGGATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGAACATATGCCCTTTCTATATATGGTAGCTTCTTTTGGATATAT  200

seq1  TCCAAGTAGTGGTATAGCTAGTTCTTCATAGAGAGCAATTTCCAATTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTAGTGGTATAGCTAGTTCTTCATAGAGAGCAATTTCCAATTTTC  250

seq1  GGATAAACCTTTTGTATAAGCCTGAGACACTGAGTTTGTATACCTAGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAACCTTTTGTATAAGCCTGAGACACTGAGTTTGTATACCTAGGAC  300

seq1  CTATCTAAAAAGTCTGGCATGACAATATATACCTGTAATTTCAGTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTAAAAAGTCTGGCATGACAATATATACCTGTAATTTCAGTTCTTT  350

seq1  ATGGCATACACAGTTGCATTTCAAACAGAGAGCTAGATATTATGTGTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATACACAGTTGCATTTCAAACAGAGAGCTAGATATTATGTGTAGG  400

seq1  TGCAAGAGAAAGTTCCAGGGATCATGAGTGCCTAACTTTAAAATTAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAGAAAGTTCCAGGGATCATGAGTGCCTAACTTTAAAATTAAGAT  450

seq1  AAAGAGATGCCTGGGAAGACATCCATTGCTAACCACTCCTTTTATGGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATGCCTGGGAAGACATCCATTGCTAACCACTCCTTTTATGGAGG  500

seq1  CAGCACAAATTTATGCACACTTAAAATACAGAAGAAAAATATAATATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAAATTTATGCACACTTAAAATACAGAAGAAAAATATAATATTTA  550

seq1  CAAAAGTTTTGTTGAATGCTTAGGTATCTGGTACAAGTTTGTAATTTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTTTTGTTGAATGCTTAGGTATCTGGTACAAGTTTGTAATTTATA  600

seq1  TAATAATTAAGCACAAACACATCCTCTTTAGATCAGTTGACACATTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTAAGCACAAACACATCCTCTTTAGATCAGTTGACACATTTCTT  650

seq1  TCCTCCTCCTTCTCTAAAGACACGAGTTCAATTCTCTTACAGAATTCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTTCTCTAAAGACACGAGTTCAATTCTCTTACAGAATTCCTT  700

seq1  GGCAGCACATTTTGTGTTGAGCAACACTTGGAATTC  736
      ||||||||||||||||||||||||||||||||||||
seq2  GGCAGCACATTTTGTGTTGAGCAACACTTGGAATTC  736