BAC Information

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BAC

Clone NameB6Ng01-002A06
Chromosome1 (Build37)
Map Location 10,975,494 - 11,087,429
singlet/doubletdoublet
Overlap genenone
Upstream gene4930418G15Rik, Cops5, Cspp1, Arfgef1, Cpa6, LOC433271
Downstream geneC030045D06Rik, A830018L16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002A06.bB6Ng01-002A06.g
ACCDH840167DH840168
length2181,113
definitionDH840167|Mus musculus domesticus DNA, BAC clone: B6Ng01-002A06, 5' end.DH840168|Mus musculus domesticus DNA, BAC clone: B6Ng01-002A06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,975,494 - 10,975,711)(11,086,319 - 11,087,429)
sequence
attcatccaggggccttgggaaaacaataccaggataatcatatctatta
gattctgaagccatcagtccttgattaggatttgaagcagaaggttccat
aaaggcttataaatttaatagaagcaatacaaaaaaaatctagcctaggt
gatgagaactcattaagaaaagttatgtttctcctttccatttaggatcc
atgggggtgggggggtgg
gaattcaaactttcagctggtctctacagctagaatatttcagctttaaa
tgtgcctgctttcttttaacccataggtaaattgctgggttttatttaaa
tcaaagtttctatcttttggttttgatacttaatattcaaaacattaagc
atagcctcatatttccataataattactgataggttatatctccaatgtc
aatgaaaagatccatttcaaaatagattagattagattaaaggcaggtta
gttaggaattaggattgaggccaggggaatctccaaggggaagtgggagg
agagaaagagagaaagagcatgagtacagagaaaagagaagaagaagaga
gcaagaaagacaaaaatgtctgggttatataggaaaagcctctgagggaa
tggcagcccagctcctgggctgggagtttaggattgggggcaaggtatgt
caggtaaggattggggaatgctgggagaacctgaaggccagttctgcttt
gatatgtaaaatacatacctcagtcctttgtccaaagtcctttgtccaaa
caactactagtattggtcttatagtctactacaaatagagttaaacaaaa
actcaaatctattttaaaattctaaagtagaaattaataaagaggtgtta
ttatattcacttgcttatctatattccaaacatattttgttttaggaaac
ctcttcttaaaatttctttttatcctgacagaacagaatcaaatggagat
gttgtaaatctttacacagtttgatcaacactcctgtgctcactgagccc
ccaaatttaccatgaacatgaacctaaggtctcaatacagtagcatgatt
gcttattactttcttgtgagtatataattccttattttgggggataccac
agttaaaatagctttttaaagatagcatacttaccaagactcaaggactt
taagcttaattactaaacagttgtcatgtttatgaatatccttcatcaaa
aatacctcactgtgaatccagaacctacagcttaaaccctcatattgatc
cacctaagggaggtgaaatgagcgtggctcagttctagagatgaggcaac
agctctaattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_10975494_10975711
seq2: B6Ng01-002A06.b_53_270

seq1  ATTCATCCAGGGGCCTTGGGAAAACAATACCAGGATAATCATATCTATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCCAGGGGCCTTGGGAAAACAATACCAGGATAATCATATCTATTA  50

seq1  GATTCTGAAGCCATCAGTCCTTGATTAGGATTTGAAGCAGAAGGTTCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGAAGCCATCAGTCCTTGATTAGGATTTGAAGCAGAAGGTTCCAT  100

seq1  AAAGGCTTATAAATTTAATAGAAGCAATACAAAAAAAATCTAGCCTAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTTATAAATTTAATAGAAGCAATACAAAAAAAATCTAGCCTAGGT  150

seq1  GATGAGAACTCATTAAGAAAAGTTATGTTTCTCCTTTCCATTTAGGATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAACTCATTAAGAAAAGTTATGTTTCTCCTTTCCATTTAGGATCC  200

seq1  ATGGGGGTGGGGGGGTGG  218
      ||||||||||||||||||
seq2  ATGGGGGTGGGGGGGTGG  218

seq1: chr1_11086319_11087429
seq2: B6Ng01-002A06.g_67_1179 (reverse)

seq1  TTTAATTAGAGCTGTTGACTTACTTCATAGTACTGGGCCACACTCAATTT  50
      ||||||||||||||||| || |  || ||| |||| ||||| ||| ||||
seq2  TTTAATTAGAGCTGTTGCCTCATCTC-TAGAACTGAGCCACGCTC-ATTT  48

seq1  CACCTCACTTTGGGTGGATCAATTATG-TGGTTTTAGCTGTAGGTTCTGG  99
      |||||| | || |||||||||| ||||  ||||| |||||||||||||||
seq2  CACCTC-CCTTAGGTGGATCAA-TATGAGGGTTTAAGCTGTAGGTTCTGG  96

seq1  ATTCACAGTGAGGTA-TTTTGATGAATGAATATCATTAACATGAC-ACTG  147
      ||||||||||||||| |||||||||| ||   |||| |||||||| ||||
seq2  ATTCACAGTGAGGTATTTTTGATGAAGGATATTCATAAACATGACAACTG  146

seq1  TTTAGTAATTAAGCTTAAAGTCCTTGAGTCTTGGTAAGTATGCTTTCTTT  197
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTTAGTAATTAAGCTTAAAGTCCTTGAGTCTTGGTAAGTATGCTATCTTT  196

seq1  AAAATGCTATTTTAACTGTGGTTATCCCCAAAATAAGGAATTATATACTC  247
      |||| |||||||||||||||||   |||||||||||||||||||||||||
seq2  AAAAAGCTATTTTAACTGTGGTATCCCCCAAAATAAGGAATTATATACTC  246

seq1  ACAAGGAAGTAATAAGCAATCATGCTACTGTATTGAGACC-TAGGTTCAT  296
      ||||| |||||||||||||||||||||||||||||||||| |||||||||
seq2  ACAAGAAAGTAATAAGCAATCATGCTACTGTATTGAGACCTTAGGTTCAT  296

seq1  GTTCATGGTAA--TTTGGGGCTCAGTGAGCACAGGAGTGTTGATCAAACT  344
      |||||||||||  || ||||||||||||||||||||||||||||||||||
seq2  GTTCATGGTAAATTTGGGGGCTCAGTGAGCACAGGAGTGTTGATCAAACT  346

seq1  GTGTAAAGATTTACAACATCTCCATTTGATTCTGTTCTGTCAGGATAAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAAGATTTACAACATCTCCATTTGATTCTGTTCTGTCAGGATAAAA  396

seq1  AGAAATTTTAAGAAGAGGTTTCCTAAAACAAAATATGTTTGGAATATAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTTAAGAAGAGGTTTCCTAAAACAAAATATGTTTGGAATATAGA  446

seq1  TAAGCAAGTGAATATAATAACACCTCTTTATTAATTTCTACTTTAGAATT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAAGTGAATATAATAACACCTCTTTATTAATTTCTACTTTAGAATT  496

seq1  TTAAAATAGATTTGAGTTTTTGTTTAACTCTATTTGTAGTAGACTATAAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAGATTTGAGTTTTTGTTTAACTCTATTTGTAGTAGACTATAAG  546

seq1  ACCAATACTAGTAGTTGTTTGGACAAAGGACTTTGGACAAAGGACTGAGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATACTAGTAGTTGTTTGGACAAAGGACTTTGGACAAAGGACTGAGG  596

seq1  TATGTATTTTACATATCAAAGCAGAACTGGCCTTCAGGTTCTCCCAGCAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTTTACATATCAAAGCAGAACTGGCCTTCAGGTTCTCCCAGCAT  646

seq1  TCCCCAATCCTTACCTGACATACCTTGCCCCCAATCCTAAACTCCCAGCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAATCCTTACCTGACATACCTTGCCCCCAATCCTAAACTCCCAGCC  696

seq1  CAGGAGCTGGGCTGCCATTCCCTCAGAGGCTTTTCCTATATAACCCAGAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCTGGGCTGCCATTCCCTCAGAGGCTTTTCCTATATAACCCAGAC  746

seq1  ATTTTTGTCTTTCTTGCTCTCTTCTTCTTCTCTTTTCTCTGTACTCATGC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCTTTCTTGCTCTCTTCTTCTTCTCTTTTCTCTGTACTCATGC  796

seq1  TCTTTCTCTCTTTCTCTCCTCCCACTTCCCCTTGGAGATTCCCCTGGCCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCTCTTTCTCTCCTCCCACTTCCCCTTGGAGATTCCCCTGGCCT  846

seq1  CAATCCTAATTCCTAACTAACCTGCCTTTAATCTAATCTAATCTATTTTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTAATTCCTAACTAACCTGCCTTTAATCTAATCTAATCTATTTTG  896

seq1  AAATGGATCTTTTCATTGACATTGGAGATATAACCTATCAGTAATTATTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATCTTTTCATTGACATTGGAGATATAACCTATCAGTAATTATTA  946

seq1  TGGAAATATGAGGCTATGCTTAATGTTTTGAATATTAAGTATCAAAACCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATATGAGGCTATGCTTAATGTTTTGAATATTAAGTATCAAAACCA  996

seq1  AAAGATAGAAACTTTGATTTAAATAAAACCCAGCAATTTACCTATGGGTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAGAAACTTTGATTTAAATAAAACCCAGCAATTTACCTATGGGTT  1046

seq1  AAAAGAAAGCAGGCACATTTAAAGCTGAAATATTCTAGCTGTAGAGACCA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGCAGGCACATTTAAAGCTGAAATATTCTAGCTGTAGAGACCA  1096

seq1  GCTGAAAGTTTGAATTC  1111
      |||||||||||||||||
seq2  GCTGAAAGTTTGAATTC  1113