BAC Information

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BAC

Clone NameB6Ng01-002B10
Chromosome1 (Build37)
Map Location 98,116,551 - 98,258,774
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383603, Tmem157, LOC100041686, Rnu7-ps2, St8sia4
Downstream geneGm1833, Slco4c1, EG329217, Slco6b1, LOC670708, LOC623430, Slco6c1, EG634331, EG634346
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002B10.bB6Ng01-002B10.g
ACCDH840220DH840221
length952895
definitionDH840220|Mus musculus domesticus DNA, BAC clone: B6Ng01-002B10, 5' end.DH840221|Mus musculus domesticus DNA, BAC clone: B6Ng01-002B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,257,822 - 98,258,774)(98,116,551 - 98,117,200)
sequence
gaattcaattagttatgaaaaagacatttgagaatatagagaataaacat
catgtagatgacaaactaagagtatgccaaaatatggatcagcataaaat
atttttcatccaaaaagcagcaaatagttcaaaaggacagaaggtaatca
ggttctaagaatactactgttgatgtaaaatatgagtggaagattatgta
tagtggggattttcataggtactggaccttatgtgtctcagacaaatatc
aagccctactgagagagacatcagtggataattctgcaggaattctaaaa
ttatgcagaatgaaagaaaaaaaaatctcaccagtgactagaatgatgat
ccagaattaattgaggtcatgagtgttaataatgggcaagaaacatgaag
gggatgtagaaatacgttaccaaggcagtgtgtagggtttcattattgtt
cagtgagggcatgggaatcttcgagctccttcctatcatagttagtctac
ttggggtctgtctcagtctgaggtgttgtcagataatcttacaaatattt
tggggtatagtattttttctctagcttgttatagctatcaaaattataat
tcacatcctgtgcttaaacatcaacataatcattgactgtttcatagaaa
cataaagtttttttgtgatagttattggtaataataactttgtagattgt
ttaaacaggggagtagacagtcaaactactatgtaggtgaaatgattttc
atgtactatttgcactgtggattcagggaagtgattattgacacaggatt
acagaaagatagacaagcattcatgtgttcttgttccctataaatgtgga
atgaatttccagactaaacagaagtatgcattttgttctcctctttccac
aaaacacattataaaatattgagggattttcactggtcaaatggcaatga
tt
gaattcacttcatttcccttgatcaatatgtttgggtatttttttttttt
tgccagtaccatggtgttattactatcattctgtagtaagattgaaataa
gggacactcatacctccagaaattcttttattatacagggtataataaaa
gctaaagctatcctgggtttgttttgtttagttctgttctgttttgtttc
tccatatgaacttaagtattgatctttcaaagtcagtaagaattatgatg
aaattatgattaggattgtattgaatctgtagattgtttttgataaggtg
gacagttttactttgttaatcttactgatccatgagcatagcagatcatc
cagtcttctgacatctcattttctttcttcaaatacttgaaatttttttg
taaaaatatttcacttgcttggttaagattgtccaatttatttcatatag
tttatgagtattgtgaactgtgttgttttcatggtttctttttcagtaca
ttgtttctatacagtaagcctactgatttctttttattttttaattaatt
gtatattcagacatttagctgaaggaatttagggaccatttatgcataca
attgtatcatttgcaaataatgatactttgactttctcagttcacatttt
tatccccttgatctgatctagttttcgtatggcttcagctagatttttca
agtactttattgaatagatatggagaaattgaataatcttgtggtaagta
cttgaacagttaatgcggttccctgaaaatggtgatgggaatttaaatca
gtcagtgtaataagcatacttgaaactactgtgtaaactctcgctctctc
tctctctctctctctctctatactagatatataatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_98257822_98258774
seq2: B6Ng01-002B10.b_44_995 (reverse)

seq1  AATCATTTAGCTTTTGAACCAGTGAAAATCCCTCAATA-TTTATATTGTG  49
      |||||||  ||  ||  ||||||||||||||||||||| |||||| ||||
seq2  AATCATT--GCCATTTGACCAGTGAAAATCCCTCAATATTTTATAATGTG  48

seq1  TTTCTGAAAAAGAGAAGAGCAAAATGTATACTTCTGTATAGTTATGGAAA  99
      |||     |||||| ||| ||||||| |||||||||| ||| | ||||||
seq2  TTTTGTGGAAAGAGGAGAACAAAATGCATACTTCTGTTTAG-TCTGGAAA  97

seq1  TACATTCAACATATATAGGGAACAA-AACACATCAAATGCTTGTCTATC-  147
      | ||||| |||| |||||||||||| |||||||  |||||||||||||| 
seq2  TTCATTCCACATTTATAGGGAACAAGAACACAT-GAATGCTTGTCTATCT  146

seq1  TTCTGTATTCCTGTGTCAATAATCACTTCCCTGAATCCACAGTGCAAATA  197
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAATCCTGTGTCAATAATCACTTCCCTGAATCCACAGTGCAAATA  196

seq1  GTACATGAAAATCATTTCACCTACATAGTAGTTTGACTGTCTACTCCCCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGAAAATCATTTCACCTACATAGTAGTTTGACTGTCTACTCCCCT  246

seq1  GTTTAAACAATCTACAAAGTTATTATTACCAATAACTATCACAAAAAAAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAACAATCTACAAAGTTATTATTACCAATAACTATCACAAAAAAAC  296

seq1  TTTATGGTTCTATGAAACAGTCAATGATTATGTTGATGTTTAAGCACAGG  347
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTCTATGAAACAGTCAATGATTATGTTGATGTTTAAGCACAGG  346

seq1  ATGTGAATTATAATTTTGATAGCTATAACAAGCTAGAGAAAAAATACTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAATTATAATTTTGATAGCTATAACAAGCTAGAGAAAAAATACTAT  396

seq1  ACCCCAAAATATTTGTAAGATTATCTGACAACACCTCAGACTGAGACAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAAATATTTGTAAGATTATCTGACAACACCTCAGACTGAGACAGA  446

seq1  CCCCAAGTAGACTAACTATGATAGGAAGGAGCTCGAAGATTCCCATGCCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGTAGACTAACTATGATAGGAAGGAGCTCGAAGATTCCCATGCCC  496

seq1  TCACTGAACAATAATGAAACCCTACACACTGCCTTGGTAACGTATTTCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAACAATAATGAAACCCTACACACTGCCTTGGTAACGTATTTCTA  546

seq1  CATCCCCTTCATGTTTCTTGCCCATTATTAACACTCATGACCTCAATTAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCTTCATGTTTCTTGCCCATTATTAACACTCATGACCTCAATTAA  596

seq1  TTCTGGATCATCATTCTAGTCACTGGTGAGATTTTTTTTTCTTTCATTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGATCATCATTCTAGTCACTGGTGAGATTTTTTTTTCTTTCATTCT  646

seq1  GCATAATTTTAGAATTCCTGCAGAATTATCCACTGATGTCTCTCTCAGTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAATTTTAGAATTCCTGCAGAATTATCCACTGATGTCTCTCTCAGTA  696

seq1  GGGCTTGATACTTTTCTGAGACACATAAGGTCCAGTACCTATGAAAATCC  747
      |||||||||| || ||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGATATTTGTCTGAGACACATAAGGTCCAGTACCTATGAAAATCC  746

seq1  CCACTATACATAATCTTCCACTCATATTTTACATCAACAGTAGTATTCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATACATAATCTTCCACTCATATTTTACATCAACAGTAGTATTCTT  796

seq1  AGAACCTGATTACCTTCTGTCCTTTTGAACTATTTGCTGCTTTTTGGATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTGATTACCTTCTGTCCTTTTGAACTATTTGCTGCTTTTTGGATG  846

seq1  AAAAATATTTTATGCTGATCCATATTTTGGCATACTCTTAGTTTGTCATC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTTTATGCTGATCCATATTTTGGCATACTCTTAGTTTGTCATC  896

seq1  TACATGATGTTTATTCTCTATATTCTCAAATGTCTTTTTCATAACTAATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGATGTTTATTCTCTATATTCTCAAATGTCTTTTTCATAACTAATT  946

seq1  GAATTC  953
      ||||||
seq2  GAATTC  952

seq1: chr1_98116551_98117200
seq2: B6Ng01-002B10.g_311_962

seq1  TATGATGAAATTATGATTAGGATTGTATTGAATCTGTAGATTGTTTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGAAATTATGATTAGGATTGTATTGAATCTGTAGATTGTTTTTGA  50

seq1  TAAGGTGGACAGTTTTACTTTGTTAATCTTACTGATCCATGAGCATAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGGACAGTTTTACTTTGTTAATCTTACTGATCCATGAGCATAGCA  100

seq1  GATCATCCAGTCTTCTGACATCTCATTTTCTTTCTTCAAATACTTGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCCAGTCTTCTGACATCTCATTTTCTTTCTTCAAATACTTGAAAT  150

seq1  TTTTTTGTAAAAATATTTCACTTGCTTGGTTAGGATTGTCCAATTTATTT  200
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTTTGTAAAAATATTTCACTTGCTTGGTTAAGATTGTCCAATTTATTT  200

seq1  CATATAGTTTATGAGTATTGTGAACTGTGTTGTTTTCATGGTTTCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGTTTATGAGTATTGTGAACTGTGTTGTTTTCATGGTTTCTTTTT  250

seq1  CAGTACATTGTTTCTATACAGTAAGCCTACTGATTTCTTTTTATTTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACATTGTTTCTATACAGTAAGCCTACTGATTTCTTTTTATTTTTTA  300

seq1  ATTAATTGTATATTCAGACATTTAGCTGAAGGAATTTAGGGACCATTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGTATATTCAGACATTTAGCTGAAGGAATTTAGGGACCATTTAT  350

seq1  GCATACAATTGTATCATTTGCAAATAATGATACTTTGACTTTCTCATTTC  400
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCATACAATTGTATCATTTGCAAATAATGATACTTTGACTTTCTCAGTTC  400

seq1  ACATTTTTATCCCCTTGATCTGATCTAGTTTTCGTATGGCTTCAGCTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTATCCCCTTGATCTGATCTAGTTTTCGTATGGCTTCAGCTAGA  450

seq1  TTTTTCAAGTACTTTATTGAATAGATATGGAGAAATTGAATAATCTTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAGTACTTTATTGAATAGATATGGAGAAATTGAATAATCTTGTG  500

seq1  GTAAGTACTTGAACAGTTAATGCGGTTCCCTGAAAATGGTGATGGGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTACTTGAACAGTTAATGCGGTTCCCTGAAAATGGTGATGGGAATT  550

seq1  TAAATCAGTCAGTGGAATAAGCATACTTGAAACTACTGTGTAAACTCTCT  600
      |||||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  TAAATCAGTCAGTGTAATAAGCATACTTGAAACTACTGTGTAAACTCTCG  600

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTATA-TATATATAT-ATATATATAT  648
      ||||||||||||||||||||||||||||| || |||||| ||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTATACTAGATATATAATATATATAT  650

seq1  AT  650
      ||
seq2  AT  652