BAC Information

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BAC

Clone NameB6Ng01-002C22
Chromosome1 (Build37)
Map Location 31,183,036 - 31,184,246
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616
Downstream gene4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275, LOC666056, LOC100041238
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002C22.bB6Ng01-002C22.g
ACCDH840283DH840284
length1,0481,194
definitionDH840283|Mus musculus domesticus DNA, BAC clone: B6Ng01-002C22, 5' end.DH840284|Mus musculus domesticus DNA, BAC clone: B6Ng01-002C22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttaaagagggaactcgtgctagttggaactgctggtcct
cctacagggtctccctcctccttagcttcttccagctttcccctaattca
actacaggggtcaacagcttccgtccattggttgggtgcaaatatctaca
tctgactctttcagttgcttgttgggtcttttagagggtagtcatgagag
gtctctttttgcgagtgctccatagcctcagtaatagtgttaggatttag
agcctccccttgagctggatcccactttggacctgttgctgaaccttctt
ttcctcaggttcttctccattttcatccctacagttctttcagataggaa
caattatgggtcagagttttgactgtgggatagtcaccccatccctcact
tgatgccctaactttctgctggaggggaactgtacaagttccctctccct
cctgtagggcacttcatctagggtccctccctttgagacctgagagtctc
tcacctcccaggtctctggtacattctggagggtggcccaacctcctacc
tcccaagttgcctgtttccattctttctgctggccttcagggctttagtc
cttttcccccacttaataccagatcatgttcccccccaacattccctttt
cctcccatgtccctcccttcccccttgtggttgctttcttctccctccca
agtgggactgaggcatcctcacttgggcccttcagcttgttgaccttttt
gggttctgtggactgtatattggatattctgtaccttttttttaactaat
atccacttattagtgaatacaggacccctgagatctctcaaacactgaac
taccaatcagcagcatacaccagctgatatgaggaccctaacacatatac
agcagaggactgctggtctgggttcaatcagagaagatgcacccaatcct
tgagagactgagctccaggaacttagagatctggtggatgggcagctggg
agaagctgtgggacacattctcatgagacagaagtggggaggggaatg

gaattccatgcagttacatgggtattgaattttgtaaaactcccttttgc
ctctagccacactcaaactcttctaagaaatggtgggatatttaatttta
cgtagaagattttcatctattttaaaaaactgacttattgagctataata
catatataaagaactgaattctttcatatgcacatgtttatgatttgtgc
atgtacaagcacttttgataccaccaccacaatcaccaacatctctaaac
attgcttgagtccactgaagaacacttggcatctatgttcctaacagttt
tgttatttgcttacttgtttgattggttttgtatttcaagatagagtttg
tctgggtagccctagctgccctggaactcactctgtagttcaggctagac
ttaaactcagagacccacttgcctctgtacctgagccattttacctgctt
ctgcaacagcctgtctgtcaggtagagtcaagtcaggccaaggtctgctg
gcagtttttctggcctgctaatgcatggaaccataagaggggatatactt
gaagctcaaggcaaggggatgaatgttctgttagtattggaggaaagaac
aaggaggaatagggaagcctccagataggtacagatattgaaggtacatc
agctatggtctctgctggcttgtgactttgttttccataattctgtaaag
tatataaagcctgaaagaattaaactcaaggctgctgcagtactgagtgg
acagtccttccaatttctaacctttgtctctgagtcttcttttctgcctt
tcctaataatcctcactccccctctgagagaactgtttgccttcgtacct
ctgcctcccaagtgctagaactacaggcatgtacgaccattcttggctgt
tcgtaacaggtttgaagtatatagtatgattattattaagttgtatagct
cttttactccaaaactaatattcattttggaaataaccctgttagtgcag
atattctaaagggaagtgaaacttcatcctgtgcagagcacttaagctaa
agtaatagagtagtaagactgctgagagatgctcttgaaaagatcctgtg
acagtctagctggtttggattgaccaagactacagagctactggaagatg
ggaacaacttagcttctgcaatatggggctggtaacttacctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_31183036_31184246
seq2: B6Ng01-002C22.g_67_1260

seq1  GAATTCCATGCAGTTACATGGGTATTGAATTTTGTAAAACTCCCTTTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCAGTTACATGGGTATTGAATTTTGTAAAACTCCCTTTTGC  50

seq1  CTCTAGCCACACTCAAACTCTTCTAAGAAATGGTGGGATATTTAATTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCCACACTCAAACTCTTCTAAGAAATGGTGGGATATTTAATTTTA  100

seq1  CGTAGAAGATTTTCATCTATTTTAAAAAACTGACTTATTGAGCTATAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGAAGATTTTCATCTATTTTAAAAAACTGACTTATTGAGCTATAATA  150

seq1  CATATATAAAGAACTGAATTCTTTCATATGCACATGTTTATGATTTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATAAAGAACTGAATTCTTTCATATGCACATGTTTATGATTTGTGC  200

seq1  ATGTACAAGCACTTTTGATACCACCACCACAATCACCAACATCTCTAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAAGCACTTTTGATACCACCACCACAATCACCAACATCTCTAAAC  250

seq1  ATTGCTTGAGTCCACTGAAGAACACTTGGCATCTATGTTCCTAACAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTGAGTCCACTGAAGAACACTTGGCATCTATGTTCCTAACAGTTT  300

seq1  TGTTATTTGCTTACTTGTTTGATTGGTTTTGTATTTCAAGATAGAGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTGCTTACTTGTTTGATTGGTTTTGTATTTCAAGATAGAGTTTG  350

seq1  TCTGGGTAGCCCTAGCTGCCCTGGAACTCACTCTGTAGTTCAGGCTAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTAGCCCTAGCTGCCCTGGAACTCACTCTGTAGTTCAGGCTAGAC  400

seq1  TTAAACTCAGAGACCCACTTGCCTCTGTACCTGAGCCATTTTACCTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTCAGAGACCCACTTGCCTCTGTACCTGAGCCATTTTACCTGCTT  450

seq1  CTGCAACAGCCTGTCTGTCAGGTAGAGTCAAGTCAGGCCAAGGTCTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACAGCCTGTCTGTCAGGTAGAGTCAAGTCAGGCCAAGGTCTGCTG  500

seq1  GCAGTTTTTCTGGCCTGCTAATGCATGGAACCATAAGAGGGGATATACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTTTCTGGCCTGCTAATGCATGGAACCATAAGAGGGGATATACTT  550

seq1  GAAGCTCAAGGCAAGGGGATGAATGTTCTGTTAGTATTGGAGGAAAGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCAAGGCAAGGGGATGAATGTTCTGTTAGTATTGGAGGAAAGAAC  600

seq1  AAGGAGGAATAGGGAAGCCTCCAGATAGGTACAGATATTGAAGGTACATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGAATAGGGAAGCCTCCAGATAGGTACAGATATTGAAGGTACATC  650

seq1  AGCTATGGTCTCTGCTGGCTTGTGACTTTGTTTTCCATAATTCTGTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGGTCTCTGCTGGCTTGTGACTTTGTTTTCCATAATTCTGTAAAG  700

seq1  TATATAAAGCCTGAAAGAATTAAACTCAAGGCTGCTGCAGTACTGAGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAAGCCTGAAAGAATTAAACTCAAGGCTGCTGCAGTACTGAGTGG  750

seq1  ACAGTCCTTCCAATTTCTAACCTTTGTCTCTGAGTCTTCTTTTCTGCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCTTCCAATTTCTAACCTTTGTCTCTGAGTCTTCTTTTCTGCCTT  800

seq1  TCCTAATAATCCTCACTCCCCCTCTGAGAGAACTGTTTGCCTTCGTACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATAATCCTCACTCCCCCTCTGAGAGAACTGTTTGCCTTCGTACCT  850

seq1  CTGCCTCCCAAGTGCTAGAACTACAGGCATGTACGACCATTCTTGGCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCAAGTGCTAGAACTACAGGCATGTACGACCATTCTTGGCTGT  900

seq1  TCGTAACAGGTTTGAAGTATATAGTATGATTATTATTAAGTTGTATAGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTAACAGGTTTGAAGTATATAGTATGATTATTATTAAGTTGTATAGCT  950

seq1  CTTTTACTCCAAAAACTAATATTCATTTTGGAAATAACCCTGTTAAGTGC  1000
      |||||||||| ||||||||||||||||||||||||||||||||| |||||
seq2  CTTTTACTCC-AAAACTAATATTCATTTTGGAAATAACCCTGTT-AGTGC  998

seq1  AGAATATTCTAAAGGGAAGTGAAACTTCATCCTGTGCAGAAGCAACTTAA  1050
      || |||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  AG-ATATTCTAAAGGGAAGTGAAACTTCATCCTGTGCAG-AGC-ACTTAA  1045

seq1  GCTCAGAGT-ATAGAAGTAGTAAAGACTGCTGAGAGATGCTC-TGAGAAG  1098
      ||| | ||| |||| |||||| |||||||||||||||||||| ||| |||
seq2  GCT-AAAGTAATAG-AGTAGT-AAGACTGCTGAGAGATGCTCTTGAAAAG  1092

seq1  AACCTGTGACAAGCCTAGCTGGTTGGAAATGACAGAGACTACCAGAGCTA  1148
      | |||||||| || |||||||||| | | ||||  |||||| ||||||||
seq2  ATCCTGTGAC-AGTCTAGCTGGTTTGGATTGACCAAGACTA-CAGAGCTA  1140

seq1  CCTGGAAGAGATGGAGACCAACTAAGCTGCCTGGAAAATATGGGGGCCAG  1198
       |||||  |||||| || ||||| ||||  ||| || ||   |||||  |
seq2  -CTGGA--AGATGG-GAACAACTTAGCT-TCTGCAATAT---GGGGCTGG  1182

seq1  TAGACTTACCTAG  1211
      || ||||||||||
seq2  TA-ACTTACCTAG  1194


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