BAC Information

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BAC

Clone NameB6Ng01-003B11
Chromosome1 (Build37)
Map Location 125,295,125 - 125,296,240
singlet/doubletsinglet
Overlap geneDpp10
Upstream geneLOC666983
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003B11.g
ACCDH840913
length1,110
definitionDH840913|Mus musculus domesticus DNA, BAC clone: B6Ng01-003B11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctcttccaccttgtttaacaggaacagtcatgaagaacttgc
ttccatctctggaaaacactggctcctcgttctagaatggagaagggcac
agaagaatctcagaatgtctatggggtcagctttctaagcaacatcaaac
ataggctgttctttgatttgaattagtttgggaaatagaaaaattgttgt
ttttaattaaagaaacaaagcatagcatttagaattttaatacatagatt
taatgtcagagtatgtgtatgaatatcaaaagtggaaaaatgttgaggta
tcatgcattggggatgaacatagcaaaaattagagtgaaggcctatgaga
aatgtttacagacaagaactttatagcttggcatgcatttgtactcagta
atttatctctcaaacctaaaaagaggataaattaattctatagaccagct
catcgaaacatgtttttaaataataaaagtctttaagaaacatttttata
aaatcatttaccaagcaagtttgctatcaagagattcctttctgatacta
tgctgaaaatataagaagtaaaatgccacacaagtagaaactacagagat
catttattataaatttactgtcattcatttttccttaaacatccacacaa
cccactctttctgtgaatctcaggtaagtttttaattaaaccacaatgac
atacattaatacaattatgaagctttcaaaaattaaataacattaagtca
tatatgtgtgtgtatatatttagatgaatatacatttggtacacttgtgt
gagaatgtgtgtgtgtgtatcttctcagaaagaacataaatacatttaca
cagacatacatatacacacacatccacacaaacacatccacatgagtaca
ttttttaattaggtattttcttcatttaaatttccaatgctaccccaaaa
gtccacaaatcatcccacccaaccccctccccccactcccacttttggcc
ctggcgttcccctgtactgaagcatataaagttttcagaccatgggcctc
tcttttctactggatggcgactagtcatcttctgatacatatgcagcttg
agaaacaagc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_125295125_125296240
seq2: B6Ng01-003B11.g_68_1177

seq1  GAATTCTCCTCTTCCACCTTGTTTAACAGGAACAGTCATGAAGAACTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCTTCCACCTTGTTTAACAGGAACAGTCATGAAGAACTTGC  50

seq1  TTCCATCTCTGGAAAACACTGGCTCCTCGTTCTAGAATGGAGAAGGGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTCTGGAAAACACTGGCTCCTCGTTCTAGAATGGAGAAGGGCAC  100

seq1  AGAAGAATCTCAGAATGTCTATGGGGTCAGCTTTCTAAGCAACATCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATCTCAGAATGTCTATGGGGTCAGCTTTCTAAGCAACATCAAAC  150

seq1  ATAGGCTGTTCTTTGATTTGAATTAGTTTGGGAAATAGAAAAATTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCTGTTCTTTGATTTGAATTAGTTTGGGAAATAGAAAAATTGTTGT  200

seq1  TTTTAATTAAAGAAACAAAGCATAGCATTTAGAATTTTAATACATAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTAAAGAAACAAAGCATAGCATTTAGAATTTTAATACATAGATT  250

seq1  TAATGTCAGAGTATGTGTATGAATATCAAAAGTGGAAAAATGTTGAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCAGAGTATGTGTATGAATATCAAAAGTGGAAAAATGTTGAGGTA  300

seq1  TCATGCATTGGGGATGAACATAGCAAAAATTAGAGTGAAGGCCTATGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCATTGGGGATGAACATAGCAAAAATTAGAGTGAAGGCCTATGAGA  350

seq1  AATGTTTACAGACAAGAACTTTATAGCTTGGCATGCATTTGTACTCAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTACAGACAAGAACTTTATAGCTTGGCATGCATTTGTACTCAGTA  400

seq1  ATTTATCTCTCAAACCTAAAAAGAGGATAAATTAATTCTATAGACCAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTCTCAAACCTAAAAAGAGGATAAATTAATTCTATAGACCAGCT  450

seq1  CATCGAAACATGTTTTTAAATAATAAAAGTCTTTAAGAAACATTTTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGAAACATGTTTTTAAATAATAAAAGTCTTTAAGAAACATTTTTATA  500

seq1  AAATCATTTACCAAGCAAGTTTGCTATCAAGAGATTCCTTTCTGATACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTTACCAAGCAAGTTTGCTATCAAGAGATTCCTTTCTGATACTA  550

seq1  TGCTGAAAATATAAGAAGTAAAATGCCACACAAGTAGAAACTACAGAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAAATATAAGAAGTAAAATGCCACACAAGTAGAAACTACAGAGAT  600

seq1  CATTTATTATAAATTTACTGTCATTCATTTTTCCTTAAACATCCACACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTATAAATTTACTGTCATTCATTTTTCCTTAAACATCCACACAA  650

seq1  CCCACTCTTTCTGTGAATCTCAGGTAAGTTTTTAATTAAACCACAATGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCTTTCTGTGAATCTCAGGTAAGTTTTTAATTAAACCACAATGAC  700

seq1  ATACATTAATACAATTATGAAGCTTTCAAAAATTAAATAACATTAAGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTAATACAATTATGAAGCTTTCAAAAATTAAATAACATTAAGTCA  750

seq1  TATATGTGTGTGTATATATTTAGATGAATATACATTTGGTACACTTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGTGTGTATATATTTAGATGAATATACATTTGGTACACTTGTGT  800

seq1  GAGAATGTGTGTGTGTGTATCTTCTCAGAAAGAACATAAATACATTTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTGTGTGTGTGTATCTTCTCAGAAAGAACATAAATACATTTACA  850

seq1  CAGACATACATATACACACACATCCACACAAACACATCCACATGAGTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATACATATACACACACATCCACACAAACACATCCACATGAGTACA  900

seq1  TTTTTTAATTAGGTATTTTCTTCATTTAAATTTCCAATGCTACCCCAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATTAGGTATTTTCTTCATTTAAATTTCCAATGCTACCCCAAAA  950

seq1  GTCCCACAAATCATCCCACCCCAACCCCCCTCCCCCCACTCCCACTTTTT  1000
      || ||||||||||||||||||  | |||||||||||||||||||| ||||
seq2  GT-CCACAAATCATCCCACCC--AACCCCCTCCCCCCACTCCCAC-TTTT  996

seq1  GGCCCTGGCGTTCCCCTGTACTGAAGCATATAAAGTTTTCAAGACCAATG  1050
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  GGCCCTGGCGTTCCCCTGTACTGAAGCATATAAAGTTTTC-AGACC-ATG  1044

seq1  GGCCTCTC-TTTCTACT-GATGGCCGACTAGGTCATCTTCTGATACATAT  1098
      |||||||| |||||||| ||||| |||||| |||||||||||||||||||
seq2  GGCCTCTCTTTTCTACTGGATGG-CGACTA-GTCATCTTCTGATACATAT  1092

seq1  GCAGCTAGAGACACAAGC  1116
      |||||| |||| ||||||
seq2  GCAGCTTGAGAAACAAGC  1110