MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-004E17
Chromosome	1 (Build37)
Map Location	144,569,806 - 144,571,035
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC639376
Downstream gene	LOC545369, Cdc73, B3galt2, LOC623138
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC639376 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:639376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC545369 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1986 ESTs, 7 Proteins pseudo : _no_value

name	Cdc73 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214498 MGI:2384876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B3galt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26878 MGI:1349461
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623138 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623138
definition	note : heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo : _no_value

name	Cdc73 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122444 GeneID:214498 MGI:2384876
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Vcell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) transcript_id : NM_145991.1

name	B3galt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801472 GeneID:26878 MGI:1349461
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 transcript_id : NM_020025.3

name	Cdc73 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122445 CCDS:CCDS15341.1 GeneID:214498 MGI:2384876
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : hyperparathyroidism 2 homolog protein_id : NP_666103.1

name	B3galt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542173 CCDS:CCDS15342.1 GeneID:26878 MGI:1349461
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008378 - galactosyltransferase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0008499 - UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity [Evidence IDA] GO_process : GO:0009312 - oligosaccharide biosynthesis [Evidence IDA]; GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 protein_id : NP_064409.2

name	LOC639376 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639376
definition	number : 3 pseudo : _no_value

name	LOC639376 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639376
definition	number : 2 pseudo : _no_value

name	LOC639376 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639376
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:192224
definition	standard_name : fc06a05.x1

name	(CDS detail)
type	STS
link
xref	UniSTS:225051
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123321
definition	standard_name : 16.MMHAP84FRF7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:210552
definition	standard_name : RH136572

name	(CDS detail)
type	STS
link
xref	UniSTS:207227
definition	standard_name : RH127034

name	(CDS detail)
type	STS
link
xref	UniSTS:463990
definition	standard_name : HRPT2__6588

name	(CDS detail)
type	STS
link
xref	UniSTS:231578
definition	standard_name : RH142331

name	(CDS detail)
type	STS
link
xref	UniSTS:495935
definition	standard_name : B3galt2

name	(CDS detail)
type	STS
link
xref	UniSTS:231712
definition	standard_name : RH142465

name	LOC545369 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234324 GeneID:545369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1986 ESTs, 7 Proteins product : similar to ribosomal protein L4 pseudo : _no_value transcript_id : XR_034542.1

clone name	MSMg01-446D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-334P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229E03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-004E17.b	B6Ng01-004E17.g
ACC	DH841749	DH841750
length	1,250	1,195
definition	DH841749\|Mus musculus domesticus DNA, BAC clone: B6Ng01-004E17, 5' end.	DH841750\|Mus musculus domesticus DNA, BAC clone: B6Ng01-004E17, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaagacccatacctagatatgataaaagcaatctacagcaaacca gtagccaacatcaaagtaaatggtgagaagctgggagcaatcccactaaa atcagggactagacaaggctgtccactctctccatacctattcaacattg tacttgaagtcctatccagagcaattcgacaacaaaaggagatcaagggg atacaaattggaaaagaaaaagtcaaaatattactttttgcagattatat gatagtatatataagtgaccctaaatattccaccagagaactcctaaacc tgataaacagcttcattgaagtagctagatataaaataaactcaaacaag tcaatggtctttctctacacaaagaataaacaggctgagaaagaaattag ggagacaacacccttctcaatagtcacaattggcgtgactctacctaagg aagtgaaagatctttgtgataaaaacttcaagtctctgaagaaagaaatt aaaaaagatctcagaaaatggaaagatctcccatgctcatggattggcag aatcaacattgtaaaaatggctatcttgccaaaaacaatttacagattca atgcaatccccatcaaaattccaactcaattcttcaacgaattagaaaga gcaatctgcaaattcatctggaataacaaaaaacctaggatagcaaaaac tgtgcttaaggataaaagaacctctggtggaatcactatgcctgacctaa agctttactataatgcaattgtgataaaaactgcatggtactggtatagt gatagacaagcagaccaatggaatagaattgaagacccaaaaatcaaccc acacacctttggtcacttgattttcgaaaagggagctaaaaccatccagt ggaagaaagacagcattttcaacaaatggtgctggcacaactggttgtat catgtagaagaatgggaatcgatcattcctatctcctgtactaaggtcaa atctagtggatcaggacttcacataaaaccagagacacctgaaacttata gaggaaatggggggaaggccttgaagaaattggcacatgggtaagatcct gaatagaatagcatggcttgcactgagatcagaatgacaaaggacctcat gaaacctgctaagctctgcaagcaaagaaacctcatagataagccacgat tgagatctacatcgaatcggaatgaactaattcccaattatttagagaat	gaattcctttttttggagaagaaacaatttttgttgttgttgctgttttt tagtagacatagggatacacatttgatatactttgctctctaaagtgtta tgtggagaaaaaattggtccaataaacataaaaacaaaacaaattgtaac aataaatccaatgcactaagacatgaaaattaatttgaagtgaggcatgt taaagtaatcctttaataaatgtatgatgggaagaagctagaagacccca ctggttggcttcgttggtttcttgcaatgttcattaagtctgtaaaacat agtaaacaccaatcctgctacagatgagttaagtctcaagcaggttttgg gctcattgactaaaagtaaaaataaaaaggaaaacagctttctaggactg taatgattataacagttttgcccttgctaatcagaagtctaacattggcg aggtaatttctcttaatctcgtttcattgtgctcttctatctaagtatct cttacacagacctgactgcacagacttttatggactcttaaaactcccaa tgaactctcagaaagtcaagttctcttacttactgaaatctacctttaaa caatagcattactttctctagattattagtcctcaatctccccaatgctg caaacctttaatacaattcattatgttgtgacgccctcaaccaaaatgat agtttgttactttatcactctaattatgctactgttatgaatcataatat aaatatgtaatattaaggtggtcttaaatgatgtctgtgaaagggtcatt tgattcccaaagtggttttgcactgtagcttgagaaacactggtttaggg tttgcagagcctacccttgcttgccattgctgcctccccctgctgctacc aatgacttcattgtaagcttgtactcttctgatacacagaggaccacagg ctgtacatttgatgtcaggactgaagttctcatctagtcacatactctca taatattcgaatctgtgacatcttttctgagactttatcatgtgatactc ttctgtttttttttcataaatatttttttttatagatttagctcatttaa ttcaatgcttacgaaggtctaccaccccttccaaatttggacctgcttcg gttcgggcatataaagttgccggtccatgggccctctctttccag
quality values	Open. Hide. 50 27 24 31 53 26 19 19 31 55 39 55 43 32 55 55 61 55 61 47 52 47 61 52 49 47 55 49 38 38 36 19 19 31 21 27 34 43 59 59 61 59 59 59 59 59 61 61 61 59 44 59 59 59 61 59 59 61 61 59 61 59 59 59 55 55 59 59 59 55 61 61 61 59 61 61 59 59 59 59 59 61 61 59 59 59 61 61 59 61 61 59 55 55 59 61 61 59 59 59 61 61 61 59 59 61 61 59 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 55 55 61 61 61 61 61 61 61 59 59 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 52 59 52 59 59 59 61 61 59 59 59 61 61 59 59 49 59 59 59 52 59 45 59 61 61 61 59 52 59 59 61 59 59 52 59 61 61 61 61 61 61 61 61 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 42 61 61 61 61 61 61 61 61 53 61 61 53 61 61 61 61 61 61 57 57 57 57 57 47 57 57 57 53 57 53 57 57 57 57 57 57 47 34 57 57 53 57 53 35 57 53 57 53 53 53 53 57 57 47 57 53 30 53 53 57 57 50 57 57 57 57 57 53 53 57 53 42 57 57 53 53 57 53 47 28 57 57 57 53 52 47 57 57 57 52 47 53 50 53 57 53 53 47 47 53 52 34 57 57 57 43 53 40 53 52 43 47 57 53 57 45 50 57 47 47 53 53 27 53 57 53 57 47 53 50 38 37 47 47 43 41 41 33 33 35 37 57 50 45 28 57 40 32 53 45 53 52 57 43 43 47 43 52 57 39 53 50 57 38 33 53 18 38 18 23 34 41 46 57 27 57 26 37 57 39 53 40 57 41 19 38 37 44 37 28 52 38 52 30 34 44 39 40 57 37 52 40 30 53 41 29 57 52 37 39 46 16 16 33 40 27 31 37 36 42 37 52 37 22 38 43 52 40 24 53 32 32 24 57 57 57 37 35 32 53 37 29 37 46 46 25 36 40 37 53 57 34 32 37 37 39 39 53 34 29 30 30 30 30 26 33 29 31 29 12 31 20 38 27 30 32 29 32 41 30 32 36 35 48 30 29 48 48 43 48 28 27 16 51 38 19 51 51 51 20 18 33 17 34 41 46 37 24 29 31 38 25 33 43 26 51 33 44 29 28 38 24 29 29 33 33 29 25 51 51 34 41 33 38 51 46 31 30 51 30 31 26 35 34 28 51 43 25 27 29 19 38 29 38 23 33 29 38 28 27 23 12 41 46 33 26 27 22 31 34 36 22 31 51 51 20 33 26 32 29 32 51 17 24 31 36 23 29 29 34 31 31 22 22 34 18 14 24 28 35 36 16 21 28 36 13 29 24 23 25 34 31 30 19 34 38 14 29 32 27 31 44 28 30 34 27 34 27 24 36 15 14 33 27 18 27 12 14 14 12 18 14 21 7 5 11 23 34 26 20 17 23 25 10 26 17 44 16 29 28 7 14 14 17 22 33 19 31 9 11 5 4 14 8 13 17 22 13 14 4 16 19 38 35 23 10 26 6 4 6 7 24 18 8 6 16 26 14 17 29 15 22 24 7 5 14 13 8 30 14 22 18 42 20 23 7 34 36 36 36 14 9 16 6 8 30 17 13 15 5 11 14 9 19 22 17 5 10 9 19 15 8 12 3 3 6 32 12 1 15 22 6 12 9 7 15 20 11 13 5 5 6 5 18 5 6 4 9 17 17 11 17 14 14 15 21 11 7 6 7 2 2 3 4 17 16 19 16 8 20 12 15 8 8 9 5 9 13 4 7 16 11 19 8 7 4 6 5 6 23 20 8 9 9 5 7 4 17 20 5 10 15 6 10 16 15 5 4 17 4 11 12 7 7 8 16 4 18 9 5 5 7 10 7 4 5 3 1 20 21 20 21 5 10 5 11 10 5 14 20 14 4 4 10 21 4 6 1 7 9 1 3 9 4 13 7 6 10 5 4 6 1 11 11 6 5 6 8 14 15 20 20 6 5 12 2 2 18 19 7 9 3 4 7 18 4 1	Open. Hide. 55 47 38 47 61 61 61 32 37 33 29 41 43 41 28 21 43 52 61 61 55 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 34 59 52 59 59 28 55 59 59 59 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 55 44 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 52 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 42 53 61 61 57 57 57 57 57 52 45 57 57 57 57 47 53 57 57 57 53 53 45 57 57 57 53 57 52 47 57 57 57 57 53 57 57 57 53 53 53 53 57 50 53 57 57 53 57 57 53 57 53 53 53 57 57 57 53 53 57 57 50 50 57 53 53 53 57 50 53 57 53 53 57 57 52 53 53 57 53 53 52 52 33 45 52 37 45 53 52 53 57 53 53 50 52 57 53 53 41 47 57 57 38 28 46 43 57 53 57 53 52 30 57 41 41 57 53 57 35 42 57 52 45 52 28 43 50 53 47 40 41 53 53 50 37 35 52 38 37 57 39 39 33 38 41 57 53 53 34 38 38 50 23 57 57 57 37 46 50 30 50 38 41 46 31 40 16 42 35 38 44 46 33 40 40 42 35 41 48 52 37 40 53 37 40 40 40 36 42 41 30 31 32 57 32 40 36 42 40 41 37 30 40 34 36 34 51 40 44 34 32 57 41 40 41 41 37 27 44 37 33 40 40 33 47 41 29 43 21 53 44 30 32 30 32 35 51 44 29 34 39 25 37 27 39 30 41 15 32 36 51 16 13 33 20 27 30 28 30 51 46 31 30 16 46 29 51 43 25 51 29 31 28 46 39 28 51 51 48 37 32 24 29 29 38 29 33 24 29 29 29 29 22 23 43 51 30 22 25 29 24 34 41 35 51 27 15 25 46 35 31 51 33 27 28 28 14 46 16 31 38 28 33 28 46 29 28 34 38 29 32 25 40 19 28 28 28 31 43 28 28 29 19 26 27 32 51 51 51 33 25 34 28 28 31 29 29 28 27 19 27 23 20 33 28 17 13 33 15 18 26 23 40 10 16 32 18 27 18 24 23 17 21 22 22 29 24 31 28 28 28 20 8 9 18 12 24 22 18 36 25 11 30 21 20 19 32 14 19 19 17 28 28 22 26 30 17 35 51 23 19 34 23 36 31 34 13 29 16 24 22 34 35 21 29 31 34 19 18 24 23 24 26 23 15 6 11 10 31 7 10 18 5 4 25 23 22 24 14 23 11 23 19 19 22 13 23 27 19 21 20 18 31 9 9 8 21 15 14 7 22 11 9 21 17 11 17 29 12 22 10 15 20 15 42 18 12 10 20 13 12 26 7 16 14 5 4 10 12 15 15 20 22 8 18 17 30 23 30 31 32 32 30 16 10 8 17 14 30 9 22 8 7 26 36 36 30 35 18 18 7 12 20 14 10 1 3 12 22 6 5 5 5 5 13 9 30 5 4 1 2 4 3 3 12 8 20 12 4 8 2 4 3 17 20 7 4 11 14 2 4 17 17 5 14 8 8 4 4 4 18 9 4 1 1 4 7 5 7 3 1 6 13 3 3 1 2 1 4 2 2 17 4 8 3 24 14 3 11 4 8 7 13 11 17 4 3 3 20 4 4 12 18 5 3 3 5 2 6 1 6 4 12 8 10 8 13 5 16 24 15 6 18 8 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_144569806_144571035
seq2: B6Ng01-004E17.g_66_1260 (reverse)

seq1  CTGGAAAGAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAGAACAG  50
      ||||||||||||| ||  ||||| ||  ||||||||||||||  |||| |
seq2  CTGGAAAGAGAGGGCCCATGGAC-CGGCAACTTTATATGCCC--GAACCG  47

seq1  GGGAACGCCAGGGCCAAAAAGTGGGAGTGGGTGGGTAGGGACTTTTGGTA  100
        |     |||| ||  ||| | |||  |||| ||||  |||  || |||
seq2  AAG-----CAGGTCC--AAATTTGGAAGGGGT-GGTA--GAC-CTTCGTA  86

seq1  TAGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAAAAATAATTTA  150
       |||||||  ||| ||||||||||||||  |||  ||||||||||  || 
seq2  -AGCATTG--AAT-TAAATGAGCTAAAT--CTATAAAAAAAAATA--TTT  128

seq1  ATGAAAAAAAAAACAGAAGAGTATCACATGATAAAAGGTCTCAAGAAAAA  200
      ||| |||||||||||||||||||||||||||||||  ||||||   ||||
seq2  ATG-AAAAAAAAACAGAAGAGTATCACATGATAAA--GTCTCA--GAAAA  173

seq1  GAATGGTCACAGGATTCGAATATTATTGAGAGTAATTGTGGACCTAGATG  250
      ||   |||||| ||||||||||||| ||||||||  ||||   |||||||
seq2  GA--TGTCACA-GATTCGAATATTA-TGAGAGTA--TGTG--ACTAGATG  215

seq1  AGAACTTCAGTCCTGACATCAAATGTACAGCCTGTGGTCCTCTGTGTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCAGTCCTGACATCAAATGTACAGCCTGTGGTCCTCTGTGTATC  265

seq1  AGAAGAGTACAAGCTTACAATGAAGTCATTGGTAGCAGCAGGGGGAGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGTACAAGCTTACAATGAAGTCATTGGTAGCAGCAGGGGGAGGCA  315

seq1  GCAATGGCAAGCAAGGGTAGGCTCTGCAAACCCTAAACCAGTGTTTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGCAAGCAAGGGTAGGCTCTGCAAACCCTAAACCAGTGTTTCTCA  365

seq1  AGCTACAGTGCAAAACCACTTTGGGAATCAAATGACCCTTTCACAGACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGTGCAAAACCACTTTGGGAATCAAATGACCCTTTCACAGACAT  415

seq1  CATTTAAGACCACCTTAATATTACATATTTATATTATGATTCATAACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAGACCACCTTAATATTACATATTTATATTATGATTCATAACAGT  465

seq1  AGCATAATTAGAGTGATAAAGTAACAAACTATCATTTTGGTTGAGGGCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAATTAGAGTGATAAAGTAACAAACTATCATTTTGGTTGAGGGCGT  515

seq1  CACAACATAATGAATTGTATTAAAGGTTTGCAGCATTGGGGAGATTGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACATAATGAATTGTATTAAAGGTTTGCAGCATTGGGGAGATTGAGG  565

seq1  ACTAATAATCTAGAGAAAGTAATGCTATTGTTTAAAGGTAGATTTCAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAATCTAGAGAAAGTAATGCTATTGTTTAAAGGTAGATTTCAGTA  615

seq1  AGTAAGAGAACTTGACTTTCTGAGAGTTCATTGGGAGTTTTAAGAGTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAGAACTTGACTTTCTGAGAGTTCATTGGGAGTTTTAAGAGTCCA  665

seq1  TAAAAGTCTGTGCAGTCAGGTCTGTGTAAGAGATACTTAGATAGAAGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTCTGTGCAGTCAGGTCTGTGTAAGAGATACTTAGATAGAAGAGC  715

seq1  ACAATGAAACGAGATTAAGAGAAATTACCTCGCCAATGTTAGACTTCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAAACGAGATTAAGAGAAATTACCTCGCCAATGTTAGACTTCTGA  765

seq1  TTAGCAAGGGCAAAACTGTTATAATCATTACAGTCCTAGAAAGCTGTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAAGGGCAAAACTGTTATAATCATTACAGTCCTAGAAAGCTGTTTT  815

seq1  CCTTTTTATTTTTACTTTTAGTCAATGAGCCCAAAACCTGCTTGAGACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTATTTTTACTTTTAGTCAATGAGCCCAAAACCTGCTTGAGACTT  865

seq1  AACTCATCTGTAGCAGGATTGGTGTTTACTATGTTTTACAGACTTAATGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATCTGTAGCAGGATTGGTGTTTACTATGTTTTACAGACTTAATGA  915

seq1  ACATTGCAAGAAACCAACGAAGCCAACCAGTGGGGTCTTCTAGCTTCTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCAAGAAACCAACGAAGCCAACCAGTGGGGTCTTCTAGCTTCTTC  965

seq1  CCATCATACATTTATTAAAGGATTACTTTAACATGCCTCACTTCAAATTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATACATTTATTAAAGGATTACTTTAACATGCCTCACTTCAAATTA  1015

seq1  ATTTTCATGTCTTAGTGCATTGGATTTATTGTTACAATTTGTTTTGTTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATGTCTTAGTGCATTGGATTTATTGTTACAATTTGTTTTGTTTT  1065

seq1  TATGTTTATTGGACCAATTTTTTCTCCACATAACACTTTAGAGAGCAAAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTATTGGACCAATTTTTTCTCCACATAACACTTTAGAGAGCAAAG  1115

seq1  TATATCAAATGTGTATCCCTATGTCTACTAAAAAACAGCAACAACAACAA  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAAATGTGTATCCCTATGTCTACTAAAAAACAGCAACAACAACAA  1165

seq1  AAATTGTTTCTTCTCCAAAAAAAGGAATTC  1230
      ||||||||||||||||||||||||||||||
seq2  AAATTGTTTCTTCTCCAAAAAAAGGAATTC  1195

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information