BAC Information

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BAC

Clone NameB6Ng01-004O10
Chromosome1 (Build37)
Map Location 12,059,016 - 12,060,132
singlet/doubletsinglet
Overlap genenone
Upstream geneC030045D06Rik, A830018L16Rik
Downstream geneLOC665262, LOC100039709, LOC621353, LOC100039733, Sulf1, Slco5a1, LOC383490
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004O10.bB6Ng01-004O10.g
ACCDH842187DH842188
length1,0911,181
definitionDH842187|Mus musculus domesticus DNA, BAC clone: B6Ng01-004O10, 5' end.DH842188|Mus musculus domesticus DNA, BAC clone: B6Ng01-004O10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttatcatgtcatttgaagtgggaagacacactctaaattta
aggagcatctttcagtggcaacccagatgaaaggaagaccatatcttttt
ccttcactctcactggcaaatggatgtacattgtatctactgagttgctg
ttgcttcattctgtccctgatatcagaacccagcttctttgggcttcaaa
cctactgaagaccagtggctctccaggcatattctaggcacttgatagaa
cattgataccacttaggcacccagtctcatggactatgctgtcactgtgt
tcttagcctccagtataagacattgctgcattactcatactatatcatat
aaaccaatgtagtaaattccatttaaatatattttcaatcctgactaata
tgtaatctaataggaaagatatgtgtgaaattagaagggagctgtaataa
cggggctgaagggatttaagggaagagtggattatgggacgcatttcgta
tgtgaattaataaaagcacattatatacatgtatgaaatgtcatgagtaa
gcccattattttgtatacatagcatatattttcaggctcaacacagctac
ctgaaaatatttgaacttgtttttatctgtctgcatttgtagcattcctc
aattcacctctgtgggtttttttttttttttttcttaaaagtacctttat
atgttacacaaggctttgaagatttttttttaaattaatcattccattca
tttacatcttaaataatatcccacttcccggttatcacaccatcccacat
ctgctcttccactcccttttgcctatatgagagtgctccctcgcccaccc
acacgctcatgccccaccactccagcatctccctactctagggcatccaa
cctccctgggacctagggccacctgtcctgttgctgttgggcaaggccat
cctctgctacatatgtatctggagccatggatccttgttagtgtctagac
tttgagagactggtggtcagcagcccatgtgtgtttatgggttgcatccc
ctctgcatctagtcttgcagcacctcaagtcttgacttcag
gaattctttgtatatattgaatattagccctctatcagtaaggttggtaa
agatcttttcccaatctgttgattgctgttttgtcctattgatggacagt
atcctttgcattacagaagctgtgcaattttatgaggtcccattgtcaat
tcttgatcttggaaaagaagctattggtgttctgttcaggaacttttccc
ctgtgcccatgtgttccagactattccctactttcttttttattagtttc
aatgcatctggttttatgtggaggtccttgatccacttggacttgagctt
tgtacaaggagataagaatggatcaatttgcattcttctgcatgttgact
accagttcaaccagcaccatttgttgaaaatgctgactttttcaaaaatt
ctggtgacagcagatgctggcaaggatgtggagaaagaggaacacccctc
cattgctggtgggattgaaagctggtacaacaactctggagatcagtctg
gtggtgccttagaaaactggacaatttactataagtagatccagcaatac
ctctcctgggcatatacccagaagatgttccaactggcaataaggacaca
tgttccactatgttcatagcagccttatttataatagtcagaagctagaa
agaacccagatgtccctcaacagaggaatggatacagaaaatttggtacc
tttacacaatggagtactactcacctattaaaacttgggcaaaaggatgt
atttggaggatattatcctgagtgtggtaacccaatcacaaaagaagtca
cttgatatgcactcactgataagtggatattagcccagaaaactagaata
cccaagatacacttccaaacataagaaaatcaagaaggagaccaacatgt
ggatacttcattcctcctagatagggaataaaatatccttggaaggagtt
gcagaaacaaagtttggagctaagattaaggatggacatccagagactgc
ccactggggtccatcccatatcagccatcaacacagacagtaatgctatc
ttcagcagatttgctgaagaccctggtatagctgtctctcttgtgaggct
tgccagtgctgcaatacaagtgaatgctccacgtcatcttacgaggtgaa
acacgaagcctcagtgtgtggagactgagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_12059016_12060132
seq2: B6Ng01-004O10.b_46_1136

seq1  GAATTCTCTTTATCATGTCATTTGAAGTGGGAAGACACACTCTAAATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTATCATGTCATTTGAAGTGGGAAGACACACTCTAAATTTA  50

seq1  AGGAGCATCTTTCAGTGGCAACCCAGATGAAAGGAAGACCATATCTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCATCTTTCAGTGGCAACCCAGATGAAAGGAAGACCATATCTTTTT  100

seq1  CCTTCACTCTCACTGGCAAATGGATGTACATTGTATCTACTGAGTTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACTCTCACTGGCAAATGGATGTACATTGTATCTACTGAGTTGCTG  150

seq1  TTGCTTCATTCTGTCCCTGATATCAGAACCCAGCTTCTTTGGGCTTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCATTCTGTCCCTGATATCAGAACCCAGCTTCTTTGGGCTTCAAA  200

seq1  CCTACTGAAGACCAGTGGCTCTCCAGGCATATTCTAGGCACTTGATAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGAAGACCAGTGGCTCTCCAGGCATATTCTAGGCACTTGATAGAA  250

seq1  CATTGATACCACTTAGGCACCCAGTCTCATGGACTATGCTGTCACTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATACCACTTAGGCACCCAGTCTCATGGACTATGCTGTCACTGTGT  300

seq1  TCTTAGCCTCCAGTATAAGACATTGCTGCATTACTCATACTATATCATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCCTCCAGTATAAGACATTGCTGCATTACTCATACTATATCATAT  350

seq1  AAACCAATGTAGTAAATTCCATTTAAATATATTTTCAATCCTGACTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAATGTAGTAAATTCCATTTAAATATATTTTCAATCCTGACTAATA  400

seq1  TGTAATCTAATAGGAAAGATATGTGTGAAATTAGAAGGGAGCTGTAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCTAATAGGAAAGATATGTGTGAAATTAGAAGGGAGCTGTAATAA  450

seq1  CGGGGCTGAAGGGATTTAAGGGAAGAGTGGATTATGGGACGCATTTCGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCTGAAGGGATTTAAGGGAAGAGTGGATTATGGGACGCATTTCGTA  500

seq1  TGTGAATTAATAAAAGCACATTATATACATGTATGAAATGTCATGAGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATTAATAAAAGCACATTATATACATGTATGAAATGTCATGAGTAA  550

seq1  GCCCATTATTTTGTATACATAGCATATATTTTCAGGCTCAACACAGCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTATTTTGTATACATAGCATATATTTTCAGGCTCAACACAGCTAC  600

seq1  CTGAAAATATTTGAACTTGTTTTTATCTGTCTGCATTTGTAGCATTCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATATTTGAACTTGTTTTTATCTGTCTGCATTTGTAGCATTCCTC  650

seq1  AATTCACCTCTGTGGGTTTTTTTTTTTTTTTTTCTTAAAAGTACCTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACCTCTGTGGGTTTTTTTTTTTTTTTTTCTTAAAAGTACCTTTAT  700

seq1  ATGTTACACAAGGCTTTGAAGATTTTTTTTTAAATTAATCATTCCATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACACAAGGCTTTGAAGATTTTTTTTTAAATTAATCATTCCATTCA  750

seq1  TTTACATCTTAAATAATATCCCACTTCCCGGTTATCACACCATCCCACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATCTTAAATAATATCCCACTTCCCGGTTATCACACCATCCCACAT  800

seq1  CTGCTCTTCCCACTCCCTTTTGCCTATATGAGAGTGCTCCCTCGCCCACC  850
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTT-CCACTCCCTTTTGCCTATATGAGAGTGCTCCCTCGCCCACC  849

seq1  CACACGCTCATGCCCCACCACTCCAGCATCTCCCTACTCTAGGGCATCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGCTCATGCCCCACCACTCCAGCATCTCCCTACTCTAGGGCATCCA  899

seq1  ACCTCCCTGGGACCTAGGGCCACCTGTCCTGTTGCTGTTGGGCAAGGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCTGGGACCTAGGGCCACCTGTCCTGTTGCTGTTGGGCAAGGCCA  949

seq1  TCCTCTGCTACATATGTATCTGGAGCCATGGATCCTTGTTTAGTGGTCTA  1000
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  TCCTCTGCTACATATGTATCTGGAGCCATGGATCCTTG-TTAGT-GTCTA  997

seq1  GACTTTGAGAGAACTGGGTGGTCAGGCCAGCCCATGTTGTTGTTCTAATG  1050
      ||||||||||| ||| |||||||||  |||||||||    |||  | |||
seq2  GACTTTGAGAG-ACT-GGTGGTCAG--CAGCCCATG----TGTGTTTATG  1039

seq1  GGTTTGCAATCCCCCTCTGCAATTCTAGTCCTTCTGCCAGCACCCTCAAC  1100
      || |||||   ||||||||||  |||||    |||  ||||| |||||| 
seq2  GG-TTGCA--TCCCCTCTGCA--TCTAG----TCTTGCAGCA-CCTCAA-  1078

seq1  AGGTTCCTTGACTTCAG  1117
        ||  |||||||||||
seq2  --GT--CTTGACTTCAG  1091