BAC Information

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BAC

Clone NameB6Ng01-005H10
Chromosome1 (Build37)
Map Location 131,300,566 - 131,441,707
singlet/doubletdoublet
Overlap geneThsd7b
Upstream geneDars, LOC620659, Cxcr4, LOC100042732
Downstream geneLOC100042745, LOC100042740, Daf2, Cd55
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005H10.bB6Ng01-005H10.g
ACCDH842593DH842594
length5051,086
definitionDH842593|Mus musculus domesticus DNA, BAC clone: B6Ng01-005H10, 5' end.DH842594|Mus musculus domesticus DNA, BAC clone: B6Ng01-005H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,441,196 - 131,441,707)(131,300,566 - 131,301,638)
sequence
aaatgtagaacaattggcatgctttggcaggtttcaaaacctttcaactc
ttccatctgacttgttcatagacatttcttggatcaagagggaaattact
gataaaataaatttgctaagccctgaagtcatttttatatacgaagccag
atgatattctagctcttggttcatataaataaaagctttacagtaaaggt
tgacacatgttggcttcttctgtacattacatacatacattatatatata
tatatatatatatatatatatatatatatatatatatattaagtctctct
aatattagcatttgtgtataaatattgtttgttttttaaattgaatttac
ataggtatgtaaaaataataaaagtgcactcaataaatgggactattcta
gtcttactttccttggctgtggctgagaaaagataccccaacgaaagcaa
cttaaaagaaagggatttatttagctcatagttctttgttacagtctatc
tccat
gaattcaaagtagaaaacttgaaggcaggactgcttgctattacctgcag
aattacttccaatctaggaactcactcagaattacaccagcaaagactga
gaattctgctttccagctggcatactctttgactctccctctctctcctc
tagatagctgtcagctatcttgcccaggcctacctacctaggaagtagtt
tcactcacagtagactggaccctcttacatcaatcatcagtcaagataat
ccttcagaaacatagcaacaggctagtccttccattgaatctgtcagaag
actctaggttgtgggacaaacaatacggatttcagtcttaatataccaac
ctgaattccagatagcccacttatacccaaatctgtttcaacttgtagat
gtgttttacctgttgcctttgggacacttgcaaccaaaatacctatgaat
agcattcaactctaaatcataatcttgcttagaaatttggagaatttttg
ataccttgattattaacttctgaagtcattgtatattacattatgctgca
atgttgcaaggtttgtctgtctattagagctcctggtctgttcatcgcaa
tttcattctttatattcctcatctttaaaatagtgtcacccttgagactt
atgctttactcatatttaatccaccaacaaatcattttgtctctgctttc
attatgtttccagaatttgaaagacactttttttttctctttatttctcc
attccctctcccaagccctattctatatagagtggccagagtaatcttgt
taaaatgtaattttcatgagatcctctttacggttaaaaatgctcaatgg
cttcttccccagaatagattctgaagccacatttagtatttacctggccc
tgtatttcttctaggacctttggactttattcctttcttgccgagagtac
tttttcttctaatggctggcatagtttcctccttccatctgctgagagtc
atcaattgagtactgctatactcttagaccaaggaatgatacttttaagg
taagcattcacttaaatatttttgaagagaattaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131441196_131441707
seq2: B6Ng01-005H10.b_45_555 (reverse)

seq1  ATGGTGATAAACTGTAACATGGAACTGTGAGCTAAATAAATCCCTTTCTT  50
      |||| |||| |||||||||  ||||| |||||||||||||||||||||||
seq2  ATGGAGATAGACTGTAACAAAGAACTATGAGCTAAATAAATCCCTTTCTT  50

seq1  TTAAGTTGCTTTCGTTGGGGTATCTTATCACAGCAACAGCAAAGGAAACT  100
      |||||||||||||||||||||||||| || |||| ||||| ||||||| |
seq2  TTAAGTTGCTTTCGTTGGGGTATCTTTTCTCAGCCACAGCCAAGGAAAGT  100

seq1  AAGACTAGAATAGTCCCATTTAATGAGTGCACTTTTATAATTTTTACATA  150
      |||||||||||||||||||||| ||||||||||||||| |||||||||||
seq2  AAGACTAGAATAGTCCCATTTATTGAGTGCACTTTTATTATTTTTACATA  150

seq1  CCTCTGTAAAATCAATTTAAAAAACAAACAATATTAATACACAAATGCTA  200
      ||| |||||| |||||||||||||||||||||||| ||||||||||||||
seq2  CCTATGTAAATTCAATTTAAAAAACAAACAATATTTATACACAAATGCTA  200

seq1  ATATTAGAGAGACCTAATATATATATATATATATATATATATATATATAT  250
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATATTAGAGAGACTTAATATATATATATATATATATATATATATATATAT  250

seq1  ATATATATATATATAATGTATGTATGTAATGTACAGAAGAAGCCAACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATAATGTATGTATGTAATGTACAGAAGAAGCCAACATG  300

seq1  TGGTCAACCTTTACTGTAAAGCTTTTATTTATATGAACCAAGAGCTAGAA  350
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-GTCAACCTTTACTGTAAAGCTTTTATTTATATGAACCAAGAGCTAGAA  349

seq1  TATCATCTGGCTTCGTATATAAAAATGACTTCAGGGCTTAGCAAATTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCTGGCTTCGTATATAAAAATGACTTCAGGGCTTAGCAAATTTAT  399

seq1  TTTATCAGTAATTTCCCTCTTGATCCAAGAAATGTCTATGAACAAGTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGTAATTTCCCTCTTGATCCAAGAAATGTCTATGAACAAGTCAG  449

seq1  ATGGAAGAGTTGAAAGGTTTTGAAACCTGCCAAAGCATGCCAATTGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGAGTTGAAAGGTTTTGAAACCTGCCAAAGCATGCCAATTGTTCT  499

seq1  ACATTTGAATTC  512
      ||||||||||||
seq2  ACATTTGAATTC  511

seq1: chr1_131300566_131301638
seq2: B6Ng01-005H10.g_67_1152

seq1  GAATTCAAAGTAGAAAACTTGAAGGCAGGACTGCTTGCTATTACCTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTAGAAAACTTGAAGGCAGGACTGCTTGCTATTACCTGCAG  50

seq1  AATTACTTCCAATCTAGGAACTCACTCAGAATTACACCAGCAAAGACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTTCCAATCTAGGAACTCACTCAGAATTACACCAGCAAAGACTGA  100

seq1  GAATTCTGCTTTCCAGCTGGCATACTCTTTGACTCTCCCTCTCTCTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTTTCCAGCTGGCATACTCTTTGACTCTCCCTCTCTCTCCTC  150

seq1  TAGATAGCTGTCAGCTATCTTGCCCAGGCCTACCTACCTAGGAAGTAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGCTGTCAGCTATCTTGCCCAGGCCTACCTACCTAGGAAGTAGTT  200

seq1  TCACTCACAGTAGACTGGACCCTCTTACATCAATCATCAGTCAAGATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCACAGTAGACTGGACCCTCTTACATCAATCATCAGTCAAGATAAT  250

seq1  CCTTCAGAAACATAGCAACAGGCTAGTCCTTCCATTGAATCTGTCAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGAAACATAGCAACAGGCTAGTCCTTCCATTGAATCTGTCAGAAG  300

seq1  ACTCTAGGTTGTGGGACAAACAATACGGATTTCAGTCTTAATATACCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGGTTGTGGGACAAACAATACGGATTTCAGTCTTAATATACCAAC  350

seq1  CTGAATTCCAGATAGCCCACTTATACCCAAATCTGTTTCAACTTGTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTCCAGATAGCCCACTTATACCCAAATCTGTTTCAACTTGTAGAT  400

seq1  GTGTTTTACCTGTTGCCTTTGGGACACTTGCAACCAAAATACCTATGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTACCTGTTGCCTTTGGGACACTTGCAACCAAAATACCTATGAAT  450

seq1  AGCATTCAACTCTAAATCATAATCTTGCTTAGAAATTTGGAGAATTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCAACTCTAAATCATAATCTTGCTTAGAAATTTGGAGAATTTTTG  500

seq1  ATACCTTGATTATTAACTTCTGAAGTCATTGTATATTACATTATGCTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTGATTATTAACTTCTGAAGTCATTGTATATTACATTATGCTGCA  550

seq1  ATGTTGCAAGGTTTGTCTGTCTATTAGAGCTCCTGGTCTGTTCATCGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCAAGGTTTGTCTGTCTATTAGAGCTCCTGGTCTGTTCATCGCAA  600

seq1  TTTCATTCTTTATATTCCTCATCTTTAAAATAGTGTCACCCTTGAGACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTCTTTATATTCCTCATCTTTAAAATAGTGTCACCCTTGAGACTT  650

seq1  ATGCTTTACTCATATTTAATCCACCAACAAATCATTTTGTCTCTGCTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTACTCATATTTAATCCACCAACAAATCATTTTGTCTCTGCTTTC  700

seq1  ATTATGTTTCCAGAATTTGAAAGACAC-TTTTTTTTCTCTTTATTTCTCC  749
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATTATGTTTCCAGAATTTGAAAGACACTTTTTTTTTCTCTTTATTTCTCC  750

seq1  ATTCCCTCTCCCAAGCCCTATTCTATATAGAGTGGCCAGAGTAATCTTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCTCCCAAGCCCTATTCTATATAGAGTGGCCAGAGTAATCTTGT  800

seq1  TAAAATGTAATTTTCATGAGATCCTC-TTACGGTTAAAAATGCTCAATGG  848
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TAAAATGTAATTTTCATGAGATCCTCTTTACGGTTAAAAATGCTCAATGG  850

seq1  CTTC-TCCCCAGAATAGATTCTGAAGCCACA-TTAGTATTTACCT-GCCC  895
      |||| |||||||||||||||||||||||||| ||||||||||||| ||||
seq2  CTTCTTCCCCAGAATAGATTCTGAAGCCACATTTAGTATTTACCTGGCCC  900

seq1  TGTAATTCTTCTAGGACCTTTGGAC-TTATTCCTT--CTGCCGAGAGTAC  942
      |||| |||||||||||||||||||| |||||||||   ||||||||||||
seq2  TGTATTTCTTCTAGGACCTTTGGACTTTATTCCTTTCTTGCCGAGAGTAC  950

seq1  TTTTTCCTCTAATGGCT-GCATAG-TTCCTCC-TCCATCTGCTGAGAGTC  989
      |||||| |||||||||| |||||| ||||||| |||||||||||||||||
seq2  TTTTTCTTCTAATGGCTGGCATAGTTTCCTCCTTCCATCTGCTGAGAGTC  1000

seq1  A-CCATTGAGTACTGCTATACTCTTAGACCAAGGAATGATACTTTTTATA  1038
      | | |||||||||||||||||||||||||||||||||||||| |||||  
seq2  ATCAATTGAGTACTGCTATACTCTTAGACCAAGGAATGATAC-TTTTAAG  1049

seq1  GTAAGCATTCAC-TAAATATTTTTG-AGAGAATTAAT  1073
      |||||||||||| |||||||||||| |||||||||||
seq2  GTAAGCATTCACTTAAATATTTTTGAAGAGAATTAAT  1086