BAC Information

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BAC

Clone NameB6Ng01-005I10
Chromosome1 (Build37)
Map Location 12,510,895 - 12,511,906
singlet/doubletsinglet
Overlap genenone
Upstream geneA830018L16Rik, LOC665262
Downstream geneLOC100039709, LOC621353, LOC100039733, Sulf1, Slco5a1, LOC383490, Prdm14, Ncoa2, LOC665341, LOC100039812
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005I10.bB6Ng01-005I10.g
ACCDH842639DH842640
length1,0981,010
definitionDH842639|Mus musculus domesticus DNA, BAC clone: B6Ng01-005I10, 5' end.DH842640|Mus musculus domesticus DNA, BAC clone: B6Ng01-005I10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttccatgttagaaaaaaaaatgtacttgttttttctaagaaa
caaggggttaaggtaataaaatactgattcatgggataatcaaaaaggaa
ttttgggaatatattgaattgatatacaaataaaagactgggctttggtc
tgcaagagcagagctgtctagagatctccggagagctgtctcaagcagaa
cacagagctattagcttatacccatgatagacttctaatagtacatttgc
tgctctcaaatgccctttcctcagaacccctctccaagccaaggcttgtc
cttagcaaaggaaaagctgctaacagggagtggaaccagaccatgagaaa
gaagtgttttatagtcaacaaagctgaaggagttggagatctgaagggca
cgttgtcatcagacatggagttgtacagtttggagtttgcccagctgctt
ttttgttttgcttttttctcactatgctcccttccctgtgttttggaaag
gcaatgtatatcctgtgatgttagaagtatgagattattttttaattttg
attgtataggggattaactatggggacttttgaggttgtactaagtgcat
ttcttttgcaatatgttacaaccaggagcctataggggccaggaagtaga
atgtggcagtttgaataggtttgacctattaaacagaagcattcacatgt
ttgaatgcttggaccataagaagtggcattattaggaaagtctggccttg
ttggcgtatgtatagttttactgaaggaagtgttactgtggagtaagact
aaaggttacctatgctcaagctctgcccaatgttgaattcagtctctttt
ctgagtgctagtagatcaagatgtaagatctcagcttctgcagcaccatg
tctgactgaagtgtcatttttcctggcatgatgatatggtctaaaactct
gaaactataagcaaccccataatagagtgccctattcatgattctcttct
agtattggaaacccttacttagggcacatgtcatatgaatgtcctctaat
ttcccttttcttgcttatgtgggtaggtatcaagggactcgtgtagtt
gaattctctcctttatatggatgtctgctctgggcccagtccattttgga
ggtgagagttagcttgcagtttggaaagttaaaggaaatggagaggtctg
gccgtgagctagctgacgccagcctagggctgttgagtgtggatgctgca
cttggcaggtgtcttcccttcccatagccactgctccacaccaccaccat
cctccacatacttcaggaaatagcagaactaggagggttcgaggccacaa
aggctgttgatggaaaatgtgctgttcctatctcacttatacaaatagct
tcaagacatttcccaagtgcaaatccctcacacttccaaacttttatttc
acccagtaggaagaaaatgtactttaaaggacctaggaaccagagtttct
tggcaggaattttcagctcattatgtggtaattaatactaatctgtatgt
taagaaaacaaaaaagcaactccttttctttgttccaacttttagactgc
tgttcttccagacagccaagaaaactgaaacggcacctttgttttgtttt
gttttttaaagagtctgtaaggcaaataaaaaatttcacacccccactaa
acagatctacacattcttttgtcttgataataaaagtttattattagtgg
taaaatggctaacatcactaaaacacatagcaacaactagagaccccaca
gtctgggaaaaaccaatacaaaagtttgtaagttttagaaagctcttaaa
acaactggtttttaaaaagctttatctggattggtttatttacactgtga
cctcacaaattgaggtcacgttttgtgtgtttctgacatcagactgccag
gctcatcgtggaacttaggagcaaagcctttgtatcagttacgtctcttc
attctgtgaccaaatacctgggcaagaaacaacttaaagaatggttgggg
atacttctcatagatttataatttattaaaggtactgtccacagtgctat
gatgggcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_12510895_12511906
seq2: B6Ng01-005I10.g_69_1078 (reverse)

seq1  CCTGCCCATCAT-GCACTGGTGGACAGTACCTTAAATAAATTATAAATCT  49
      | |||||||||| ||||| |||||||||||||| ||||||||||||||||
seq2  CTTGCCCATCATAGCACT-GTGGACAGTACCTTTAATAAATTATAAATCT  49

seq1  AATGGAGAGTATCCCC-ACCCTTCTTTAAGTTGTTTCTTG-CCAGGTATT  97
       |||   ||||||||| ||| ||||||||||||||||||| |||||||||
seq2  -ATGAGAAGTATCCCCAACCATTCTTTAAGTTGTTTCTTGCCCAGGTATT  98

seq1  TGGTCACAGAAATGAGAGACGTAACTGATACAAAGGCCTTGCTCCTAAGT  147
      |||||||||||   ||||||||||||||||||||||| ||||||||||||
seq2  TGGTCACAGAATGAAGAGACGTAACTGATACAAAGGCTTTGCTCCTAAGT  148

seq1  TCCACGATGAGCCTGGCAGTCTGATGTCAGAAACAACACAAAACGTGACC  197
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCCACGATGAGCCTGGCAGTCTGATGTCAGAAAC-ACACAAAACGTGACC  197

seq1  TCAA-TTGTGAGGTCACAGTGTTAAATAAACCAATCCAGATAAAGCTTTT  246
      |||| |||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCAATTTGTGAGGTCACAGTG-TAAATAAACCAATCCAGATAAAGCTTTT  246

seq1  TAAAAACCAGTTTGTTTTAAGAGCTTTCTAAAACTTACAAACTTTTGTAT  296
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACCAG-TTGTTTTAAGAGCTTTCTAAAACTTACAAACTTTTGTAT  295

seq1  TGGTTTTTTCCCAGACTGTGGGGTCTCTAGTTGTTGCTATGTGTTTTAGT  346
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGG-TTTTTCCCAGACTGTGGGGTCTCTAGTTGTTGCTATGTGTTTTAGT  344

seq1  GATGTTAGCCATTTTACCACTAATAATAAACTTTTATTATCAAGACAAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTAGCCATTTTACCACTAATAATAAACTTTTATTATCAAGACAAAA  394

seq1  GAATGTGTAGATCTGTTTAGTGGGGGTGTGAAATTTTTTATTTGCCTTAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTAGATCTGTTTAGTGGGGGTGTGAAATTTTTTATTTGCCTTAC  444

seq1  AGACTCTTTAAAAAACAAAACAAAACAAAGGTGCCGTTTCAGTTTTCTTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTTTAAAAAACAAAACAAAACAAAGGTGCCGTTTCAGTTTTCTTG  494

seq1  GCTGTCTGGAAGAACAGCAGTCTAAAAGTTGGAACAAAGAAAAGGAGTTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTGGAAGAACAGCAGTCTAAAAGTTGGAACAAAGAAAAGGAGTTG  544

seq1  CTTTTTTGTTTTCTTAACATACAGATTAGTATTAATTACCACATAATGAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGTTTTCTTAACATACAGATTAGTATTAATTACCACATAATGAG  594

seq1  CTGAAAATTCCTGCCAAGAAACTCTGGTTCCTAGGTCCTTTAAAGTACAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATTCCTGCCAAGAAACTCTGGTTCCTAGGTCCTTTAAAGTACAT  644

seq1  TTTCTTCCTACTGGGTGAAATAAAAGTTTGGAAGTGTGAGGGATTTGCAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCTACTGGGTGAAATAAAAGTTTGGAAGTGTGAGGGATTTGCAC  694

seq1  TTGGGAAATGTCTTGAAGCTATTTGTATAAGTGAGATAGGAACAGCACAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAATGTCTTGAAGCTATTTGTATAAGTGAGATAGGAACAGCACAT  744

seq1  TTTCCATCAACAGCCTTTGTGGCCTCGAACCCTCCTAGTTCTGCTATTTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCAACAGCCTTTGTGGCCTCGAACCCTCCTAGTTCTGCTATTTC  794

seq1  CTGAAGTATGTGGAGGATGGTGGTGGTGTGGAGCAGTGGCTATGGGAAGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTATGTGGAGGATGGTGGTGGTGTGGAGCAGTGGCTATGGGAAGG  844

seq1  GAAGACACCTGCCAAGTGCAGCATCCACACTCAACAGCCCTAGGCTGGCG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACACCTGCCAAGTGCAGCATCCACACTCAACAGCCCTAGGCTGGCG  894

seq1  TCAGCTAGCTCACGGCCAGACCTCTCCATTTCCTTTAACTTTCCAAACTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTAGCTCACGGCCAGACCTCTCCATTTCCTTTAACTTTCCAAACTG  944

seq1  CAAGCTAACTCTCACCTCCAAAATGGACTGGGCCCAGAGCAGACATCCAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAACTCTCACCTCCAAAATGGACTGGGCCCAGAGCAGACATCCAT  994

seq1  ATAAAGGAGAGAATTC  1012
      ||||||||||||||||
seq2  ATAAAGGAGAGAATTC  1010