BAC Information

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BAC

Clone NameB6Ng01-005P03
Chromosome1 (Build37)
Map Location 50,831,370 - 50,831,624
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666962, EG666970, LOC100041993
Downstream geneTmeff2, Sdpr, LOC383504, Obfc2a, Myo1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005P03.bB6Ng01-005P03.g
ACCDH842941DH842942
length3491,235
definitionDH842941|Mus musculus domesticus DNA, BAC clone: B6Ng01-005P03, 5' end.DH842942|Mus musculus domesticus DNA, BAC clone: B6Ng01-005P03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tagtggaatttttagtgacacatatatactatcatatcatctgctaatag
tgatattttgacttcttcctttccaattttcatccccttgatctcctttt
gttgttgaattgtactggccaggacttcaagtactatgttaaatatgtag
ggagaatttgggaagccttgtctagtctctggttttagtgggattgcttc
cagcttctcaccatttactttgatgtttgtaactggtttgctgtagattg
cttttgttatgtttaagtatgggctttgaataccagatatttccatgact
tttatcatggaggcgggggggggggttagatttcgttaaatgcggattc
gaattcttggtttatttctataccccattttttgattggactgtttgttt
tttttttttttttttttttttttgtggttagcttcttgattgatattttg
gatattaaccctgtattagatgtgggggtagtgaagattttttttttcca
atccgtaggatgatgatttgtcttattgactatgtcctttgacttacaga
agctttctaatttcatgaggtcccatttgtcaattcttgattgtaaagta
tgagccattgaagttctctttaggaaattcccccctgtgccaatgagttc
aaggctctttcccactttctcttctaatagattcagtgtatttggtttta
tgttgaggtccttgatccacttgagctttgtacaaggggcaaaatatagt
tctattctcattcttctatgtacagacagccagttagaccagcacaattt
attgaagatactttctttttttccactggatatttttggcttctctgtaa
aagatcaaatgtctatgaatgtgtgtttttatttctgggtctccagttct
ttccattgatcaaagtttctgtctctgtaccaataccatggagattttta
tctctgtttctctgtaataaagcttgaggttagaaatggtggttccccta
acagttcttttatttttaagaattgtttttgctattctgggttttttaca
tttacagatgaatttgagaattgcttttttttccaggtccttgaagaatt
gtgttgagattttgatagggattgcattgaatctgtagattgtctttggt
agaaatagccattttattgtgttattttttgccaatccataagccatggg
gaggacttctacattttctgagaatctccctccattttcttttttgagag
acttgaagtaattgtcatacagagctttcacttggttgggtagaagttac
ccaagatatctaaaataatttgtggctatgggatgggaagttgttttcca
taatttcttatccagcctgttatacaatcgaataaagaagagcctactga
ttttatggagttaattctaatcgcgaagcatttgctgaagcatattacac
aggcagaaaggtctcgtggaacgaactctgggcggctctttgatgactct
aaacaatccaatgaaaaagagaaccttgcttaactgtagcaaacggtgat
ataccgtgcagtcgtaccttgtggtggacttactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_50831370_50831624
seq2: B6Ng01-005P03.b_55_307 (reverse)

seq1  AAAAGCAATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGAGA  50
      ||||||||||||||||||||||||  | ||||||||||||||||| ||||
seq2  AAAAGCAATCTACAGCAAACCAGTTACAAACATCAAAGTAAATGGTGAGA  50

seq1  AGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTT  100
      ||||||||||||||||||||||| ||| |||||||||||||| ||||  |
seq2  AGCTGGAAGCAATCCCACTAAAACCAGAGACTAGACAAGGCTTCCCAAAT  100

seq1  TCTCCCTACCTATTCAACATTGTACTTGAATTCCTAGCCAGAGCAATTCG  150
      ||||||||| |||| ||||| ||||||||| |||| |||||  |||||| 
seq2  TCTCCCTACATATTTAACATAGTACTTGAAGTCCTGGCCAGTACAATTCA  150

seq1  ACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAGGAAGAAGTCAAAA  200
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  ACAACAAAAGGAGATCAAGGGGATGAAAATTGGAAAGGAAGAAGTCAAAA  200

seq1  TATCACTTTTTGCAGATGATATGATAATATATATGAGTGACCCTAAAAAT  250
      ||||||| || ||||||||||||||| |||||||  ||| | ||||||||
seq2  TATCACTATTAGCAGATGATATGATAGTATATAT--GTGTCACTAAAAAT  248

seq1  TCCAC  255
      |||||
seq2  TCCAC  253