BAC Information

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BAC

Clone NameB6Ng01-006G18
Chromosome1 (Build37)
Map Location 103,663,321 - 103,664,418
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006G18.bB6Ng01-006G18.g
ACCDH843286DH843287
length8291,085
definitionDH843286|Mus musculus domesticus DNA, BAC clone: B6Ng01-006G18, 5' end.DH843287|Mus musculus domesticus DNA, BAC clone: B6Ng01-006G18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatggatgttggattttg
tcaaatgctttctcagcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatactgaattacattgatggatttccatatattgaacc
atccctgcatccctgggatgaatcctacttggtcaggatggatgattgtt
ttgatgtgtccttggattcagttagcaagaactttattgaggatttttgc
atcgatattcatgagcgaaattggtctgaagttctctgtctttgttgggt
ctttctgtggtttaggtatcagagtaattgtggcttaatagaatgaattg
ggtagagtacgttctgcttctattttgtggaatagcttgtgaagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatatg
gtcctgggcttttttttttttttttttttttttttttttttttttttggg
tgggagaatattaatgactggcgctatttctttaggggatataaactgtt
tagataattaaatttatcccgaattaactttagtacccgggatctgtcta
gaaatttgtgcatttcatccaaggttttccgttttgtttagtataggctt
ttatagaagggtctgatggtggttttggatttctttagatctcttggaat
gtctccctttcatttctgggttttgggattagatggcatcctgtgcctct
attgagtctggctaaggttatcatctttaatttctcaagacagatctctt
gttgatcttgaatagtctttctgttactc

gaattcttttcaggttatatgagaaaaatgtcaagcagatgtgacctcac
aataatgtccagaggaattggagaaacactttgatgtggttatctttctt
ctcttagaggatacagtcattagtctcctaaggaggctcaggttctgcat
gtttgatgtaatgcattcaatttattggatgctgatagcatgggaatcct
actgattctcattttttggagttacacagaggaatactatttttagctca
ttcacagctcttctggcttcactgggaagacaaagtctgaaagatttgaa
tcacatttaaacaatccatagccatagatcttctacacacccgatgaaac
ttgacagttttataatgatcatattataatgataataatgtccaggtgtt
ggattaatattaatgaagatatgacatattacaaacagtcaggctatgtt
tactctgtatcttgactgatgtgttggttactttttttgttaatgtaata
aagtacgctgtttaagtaaagtaatggaagaataagattatttcacctta
atggtctagagtaggtttggaacattatggtagataaggcccagcaaaag
ctatatatggcatcaagagctagaatctgtcttcaaccattttattgcac
atagtcatcatagagactactgagagtgaggccaacctatagtaattgag
tctgttgtggtgtcttctgttatttatgtactttaaccagcaatgttcca
tgtcctaaaagttccctaaacttcccataagcataacaagctgaggcttg
tgatttaaagatctcatcttgtagggcatagttctcattcaaatcaccac
aaatagaaaaacagaaattttctttacacactggaattaatttgttatac
ttcatttgtcaccactagaaccagaatatgtgatcaattagcctgtatac
catgagcattaactacttttaattttatttaccacttttaaatcagtcag
caaaatgactgggggaggatgttttctgattacgttgaagaaaaaaggct
tatcatgatggaaatcgcagtgatgaatgagactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103663321_103664418
seq2: B6Ng01-006G18.g_60_1144 (reverse)

seq1  GAGTCTCATTTCATCACTGCAGATTTTCCATCATGATAAGCCTGTTTTTC  50
      |||||||| ||||||||||| || ||||||||||||||||||| ||||||
seq2  GAGTCTCA-TTCATCACTGC-GA-TTTCCATCATGATAAGCCT-TTTTTC  46

seq1  TTTCAACTGTAAATCAAAGAAAACATCCTCCCCAGTTCATTTTTGCTGAC  100
       |||||| || ||||  ||||||||||||||||   ||| ||||||||||
seq2  -TTCAAC-GT-AATC--AGAAAACATCCTCCCCCAGTCA-TTTTGCTGAC  90

seq1  TGATTTTAAAAAGTGGTAAATAAAATTAAAAAGTAGTTAATGCTCATGGT  150
      ||||||  ||||||||||||||||||| ||||||||||||||||||||||
seq2  TGATTT--AAAAGTGGTAAATAAAATT-AAAAGTAGTTAATGCTCATGGT  137

seq1  ATACAGGCTAATTGATCACATATTCTGGTTCTAGTGGTGACAAATGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGCTAATTGATCACATATTCTGGTTCTAGTGGTGACAAATGAAGT  187

seq1  ATAACAAATTAA-TCCAGTGTGTAAAGAAAATTTTCTGTTTTTCTATTTG  249
      |||||||||||| |||||||||||||||||| ||||||||||||||||||
seq2  ATAACAAATTAATTCCAGTGTGTAAAGAAAA-TTTCTGTTTTTCTATTTG  236

seq1  TGGTGATTTGAATGAGAACTATGCCCTACAAGATGAGATCTTTAAATCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATTTGAATGAGAACTATGCCCTACAAGATGAGATCTTTAAATCAC  286

seq1  AAGCCTCAGCTTGTTATGCTTATGGGAAGTTTAGGGAACTTTTAGGACAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCAGCTTGTTATGCTTATGGGAAGTTTAGGGAACTTTTAGGACAT  336

seq1  GGAACATTGCTGGTTAAAGTACATAAATAACAGAAGACACCACAACAGAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATTGCTGGTTAAAGTACATAAATAACAGAAGACACCACAACAGAC  386

seq1  TCAATTACTATAGGTTGGCCTCACTCTCAGTAGTCTCTATGATGACTATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTACTATAGGTTGGCCTCACTCTCAGTAGTCTCTATGATGACTATG  436

seq1  TGCAATAAAATGGTTGAAGACAGATTCTAGCTCTTGATGCCATATATAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAAAATGGTTGAAGACAGATTCTAGCTCTTGATGCCATATATAGC  486

seq1  TTTTGCTGGGCCTTATCTACCATAATGTTCCAAACCTACTCTAGACCATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTGGGCCTTATCTACCATAATGTTCCAAACCTACTCTAGACCATT  536

seq1  AAGGTGAAATAATCTTATTCTTCCATTACTTTACTTAAACAGCGTACTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAAATAATCTTATTCTTCCATTACTTTACTTAAACAGCGTACTTT  586

seq1  ATTACATTAACAAAAAAAGTAACCAACACATCAGTCAAGATACAGAGTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTAACAAAAAAAGTAACCAACACATCAGTCAAGATACAGAGTAA  636

seq1  ACATAGCCTGACTGTTTGTAATATGTCATATCTTCATTAATATTAATCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCCTGACTGTTTGTAATATGTCATATCTTCATTAATATTAATCCA  686

seq1  ACACCTGGACATTATTATCATTATAATATGATCATTATAAAACTGTCAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGGACATTATTATCATTATAATATGATCATTATAAAACTGTCAAG  736

seq1  TTTCATCGGGTGTGTAGAAGATCTATGGCTATGGATTGTTTAAATGTGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCGGGTGTGTAGAAGATCTATGGCTATGGATTGTTTAAATGTGAT  786

seq1  TCAAATCTTTCAGACTTTGTCTTCCCAGTGAAGCCAGAAGAGCTGTGAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTTTCAGACTTTGTCTTCCCAGTGAAGCCAGAAGAGCTGTGAAT  836

seq1  GAGCTAAAAATAGTATTCCTCTGTGTAACTCCAAAAAATGAGAATCAGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAAAATAGTATTCCTCTGTGTAACTCCAAAAAATGAGAATCAGTA  886

seq1  GGATTCCCATGCTATCAGCATCCAATAAATTGAATGCATTACATCAAACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCCCATGCTATCAGCATCCAATAAATTGAATGCATTACATCAAACA  936

seq1  TGCAGAACCTGAGCCTCCTTAGGAGACTAATGACTGTATCCTCTAAGAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAACCTGAGCCTCCTTAGGAGACTAATGACTGTATCCTCTAAGAGA  986

seq1  AGAAAGATAACCACATCAAAGTGTTTCTCCAATTCCTCTGGACATTATTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATAACCACATCAAAGTGTTTCTCCAATTCCTCTGGACATTATTG  1036

seq1  TGAGGTCACATCTGCTTGACATTTTTCTCATATAACCTGAAAAGAATTC  1098
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCACATCTGCTTGACATTTTTCTCATATAACCTGAAAAGAATTC  1085


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