BAC Information

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BAC

Clone NameB6Ng01-006L18
Chromosome1 (Build37)
Map Location 146,871,382 - 146,979,552
singlet/doubletdoublet
Overlap genenone
Upstream geneRgs13, Rbm6-ps2, Rgs1, EG639456, Rgs21, Rgs18, LOC667877
Downstream geneLOC625057, LOC383570
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006L18.bB6Ng01-006L18.g
ACCDH843514DH843515
length9561,157
definitionDH843514|Mus musculus domesticus DNA, BAC clone: B6Ng01-006L18, 5' end.DH843515|Mus musculus domesticus DNA, BAC clone: B6Ng01-006L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,978,941 - 146,979,552)(146,871,382 - 146,872,556)
sequence
gaattctccattggtgctcaggccataatcaaggcaaactcaacatggtt
ggtcatttgactatagtggtatagtcattaataagatactattaatgcta
gcatccaaagctaaatgacacacatgtattgtctcccaggtcctatgtca
aagtgtccagacaggaactgaatcttctgctcagcattctccaggatgaa
gagactgttgtgcacaatttatcttgttgggagggtttaagcccatttcc
acctcaagtacaattcaggctctgatatatgtgagcatgaagaaccagct
tccaaagaacctatcactcatccctgacacaggggtctctcttgacaatg
tggtgggctgggttttcaaagttcttggataatctcctctctaatgtctt
tgatcttactgtgtctctttttgggttcaggtaaataggtctgaaccact
ctagataatcttctatttgattagcttcaaatcaaagtagctttatttaa
ctgaaagcccgtattttatcatacagctaaactacccaagtacaggaata
atgttcttcaaatcactcaagtattatttataccaaaggtatacaaagta
atagaaatcagaaagttttggagaacttaatttttttttctatcatactg
tctttctttgtccctctctcttttactctctcacaaacactttagtgaat
gctgaatagaaccatttatgatttcacagacaaattcatcttataaaaga
aatccagaattagcctgagtacaatgttcttacataaattcagtccagga
tatatgttatagagtccatacaggcttcttcatagtttttagattcttat
cataaaatacagtgttcctcaaatccccatcacatgtggacacacacaca
cagagaaacagagagaaagaagagagagggagaaaggaagacggagaagg
agaata
gaattctctactagaaagacttataactcacgtttgtttatgttcaggat
ggtctattgcagggagatgttagatgctggagaagctcattaagtactca
gcactcagggcttgtactggaggatagtcagtggaaatctctgtctgaat
cataaaatttctgacactcacagggaaaacaggtgttcagcataaaatca
tcttgtgtgtacagaccatttagcaacagtaagccacccatcattttggg
gtatgatagagagactgccatgtccaaattttgctaatggcttatctttc
acagtagttttaacgtaagctttgaaaatgttttttatttttatggggtt
ataaaatagatttacatttatgaaattattgttatatcattatatttcta
ctcttaatatttggttatcattaatagattatttataaaattctagtcac
tttaaggccaacttgtattacctgttcaggttcccctattttgttcctta
ttataaatgtcaaagtttggattgacaagcaatcctgtttgtactgaaag
gtgcttatttgtgacaatgcctatagtgaggtgatgctagagatggtctt
agagaatttttttctttagttttagattatggccatcaaagtagtgatat
gattcatatatctagtactgatatttgttgcatgtcagtgaaactctgta
ctggactaattctggctagacttaaaattcaacttccttcagtactggtg
atttcaatattcagctcagattatttccactgtgtgatgcctttcaaatg
taatctgccacccaataacatcttcttcctaatactttgtttttccaatg
gagtgggactgatgttctgtgctgttttataagtttcatttcagcacttt
ggaaaaatgatgtattaatcagtttttctagtggaaaataagttatggaa
tgaatacttattcatcctataaatatatggtgattattagaatgctacag
gctgtggtaaagctagtcaatgctatctacaacgaggtccaagaatacag
tagcttcagtctttagtctgggaaacttagcttgtcttaagttatggcag
aaacttgaagaaaacagctcatttaatgcacttatcctgagcctaaacca
agtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_146978941_146979552
seq2: B6Ng01-006L18.b_40_651 (reverse)

seq1  TCTGATTTCTATTACTTTGTATACCTTTGGTATAAATAATACTTGAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTTCTATTACTTTGTATACCTTTGGTATAAATAATACTTGAGTGA  50

seq1  TTTGAAGAACATTATTCCTGTACTTGGGTAGTTTAGCTGTATGATAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGAACATTATTCCTGTACTTGGGTAGTTTAGCTGTATGATAAAAT  100

seq1  ACGGGCTTTCAGTTAAATAAAGCTACTTTGATTTGAAGCTAATCAAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGCTTTCAGTTAAATAAAGCTACTTTGATTTGAAGCTAATCAAATAG  150

seq1  AAGATTATCTAGAGTGGTTCAGACCTATTTACCTGAACCCAAAAAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTATCTAGAGTGGTTCAGACCTATTTACCTGAACCCAAAAAGAGAC  200

seq1  ACAGTAAGATCAAAGACATTAGAGAGGAGATTATCCAAGAACTTTGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAGATCAAAGACATTAGAGAGGAGATTATCCAAGAACTTTGAAAA  250

seq1  CCCAGCCCACCACATTGTCAAGAGAGACCCCTGTGTCAGGGATGAGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCCACCACATTGTCAAGAGAGACCCCTGTGTCAGGGATGAGTGAT  300

seq1  AGGTTCTTTGGAAGCTGGTTCTTCATGCTCACATATATCAGAGCCTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTTTGGAAGCTGGTTCTTCATGCTCACATATATCAGAGCCTGAAT  350

seq1  TGTACTTGAGGTGGAAATGGGCTTAAACCCTCCCAACAAGATAAATTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTGAGGTGGAAATGGGCTTAAACCCTCCCAACAAGATAAATTGTG  400

seq1  CACAACAGTCTCTTCATCCTGGAGAATGCTGAGCAGAAGATTCAGTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACAGTCTCTTCATCCTGGAGAATGCTGAGCAGAAGATTCAGTTCCT  450

seq1  GTCTGGACACTTTGACATAGGACCTGGGAGACAATACATGTGTGTCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGACACTTTGACATAGGACCTGGGAGACAATACATGTGTGTCATTT  500

seq1  AGCTTTGGATGCTAGCATTAATAGTATCTTATTAATGACTATACCACTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGGATGCTAGCATTAATAGTATCTTATTAATGACTATACCACTAT  550

seq1  AGTCAAATGACCAACCATGTTGAGTTTGCCTTGATTATGGCCTGAGCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAATGACCAACCATGTTGAGTTTGCCTTGATTATGGCCTGAGCACC  600

seq1  AATGGAGAATTC  612
      ||||||||||||
seq2  AATGGAGAATTC  612

seq1: chr1_146871382_146872556
seq2: B6Ng01-006L18.g_66_1222

seq1  GAATTCTCTACTAGAAAGACTTATAACTCACGTTTGTTTATGTTCAGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACTAGAAAGACTTATAACTCACGTTTGTTTATGTTCAGGAT  50

seq1  GGTCTATTGCAGGGAGATGTTAGATGCTGGAGAAGCTCATTAAGTACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTATTGCAGGGAGATGTTAGATGCTGGAGAAGCTCATTAAGTACTCA  100

seq1  GCACTCAGGGCTTGTACTGGAGGATAGTCAGTGGAAATCTCTGTCTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCAGGGCTTGTACTGGAGGATAGTCAGTGGAAATCTCTGTCTGAAT  150

seq1  CATAAAATTTCTGACACTCACAGGGAAAACAGGTGTTCAGCATAAAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATTTCTGACACTCACAGGGAAAACAGGTGTTCAGCATAAAATCA  200

seq1  TCTTGTGTGTACAGACCATTTAGCAACAGTAAGCCACCCATCATTTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGTGTACAGACCATTTAGCAACAGTAAGCCACCCATCATTTTGGG  250

seq1  GTATGATAGAGAGACTGCCATGTCCAAATTTTGCTAATGGCTTATCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGATAGAGAGACTGCCATGTCCAAATTTTGCTAATGGCTTATCTTTC  300

seq1  ACAGTAGTTTTAACGTAAGCTTTGAAAATGTTTTTTATTTTTATGGGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGTTTTAACGTAAGCTTTGAAAATGTTTTTTATTTTTATGGGGTT  350

seq1  ATAAAATAGATTTACATTTATGAAATTATTGTTATATCATTATATTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAGATTTACATTTATGAAATTATTGTTATATCATTATATTTCTA  400

seq1  CTCTTAATATTTGGTTATCATTAATAGATTATTTATAAAATTCTAGTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAATATTTGGTTATCATTAATAGATTATTTATAAAATTCTAGTCAC  450

seq1  TTTAAGGCCAACTTGTATTACCTGTTCAGGTTCCCCTATTTTGTTCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGCCAACTTGTATTACCTGTTCAGGTTCCCCTATTTTGTTCCTTA  500

seq1  TTATAAATGTCAAAGTTTGGATTGACAAGCAATCCTGTTTGTACTGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATGTCAAAGTTTGGATTGACAAGCAATCCTGTTTGTACTGAAAG  550

seq1  GTGCTTATTTGTGACAATGCCTATAGTGAGGTGATGCTAGAGATGGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTATTTGTGACAATGCCTATAGTGAGGTGATGCTAGAGATGGTCTT  600

seq1  AGAGAATTTTTTTCTTTAGTTTTAGATTATGGCCATCAAAGTAGTGATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATTTTTTTCTTTAGTTTTAGATTATGGCCATCAAAGTAGTGATAT  650

seq1  GATTCATATATCTAGTACTGATATTTGTTGCATGTCAGTGAAACTCTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATATATCTAGTACTGATATTTGTTGCATGTCAGTGAAACTCTGTA  700

seq1  CTGGACTAATTCTGGCTAGACTTAAAATTCAACTTCCTTCAGTACTGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTAATTCTGGCTAGACTTAAAATTCAACTTCCTTCAGTACTGGTG  750

seq1  ATTTCAATATTCAGCTCAGATTATTTCCACTGTGTGATGCCTTTCAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAATATTCAGCTCAGATTATTTCCACTGTGTGATGCCTTTCAAATG  800

seq1  TAATCTGCCACCCAATAACATCTTCTTCCTAATACTTTGTTTTTCCAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGCCACCCAATAACATCTTCTTCCTAATACTTTGTTTTTCCAATG  850

seq1  GAGTGGGACTGATGTTCTGTGCTGTTTTATAAGTTTCATTTCAGCACTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGACTGATGTTCTGTGCTGTTTTATAAGTTTCATTTCAGCACTTT  900

seq1  -GAAAAATGATGTATTAATCAGGTTTTCTAGTGGAAAATAAGTTATGGAA  949
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGAAAAATGATGTATTAATCAGTTTTTCTAGTGGAAAATAAGTTATGGAA  950

seq1  TGAATACTTATTCATCCTATAAATATATGGTGATTTATTAGAATGGCCTA  999
      ||||||||||||||||||||||||||||||||| |||||||||||  |||
seq2  TGAATACTTATTCATCCTATAAATATATGGTGA-TTATTAGAATG--CTA  997

seq1  CAGGCTGTGGTACAGCTAGTACAATTGCTATCTACCAACAGAGGGTCCAA  1049
      |||||||||||| ||||||| ||| ||||||||| |||| || |||||||
seq2  CAGGCTGTGGTAAAGCTAGT-CAA-TGCTATCTA-CAAC-GA-GGTCCAA  1042

seq1  GAATACAGTAGGTTTTCAGTCCTTTAGTCTGGGAAACTTAGCTTGTCTTA  1099
      |||||||||||   |||||| |||||||||||||||||||||||||||||
seq2  GAATACAGTAG--CTTCAGT-CTTTAGTCTGGGAAACTTAGCTTGTCTTA  1089

seq1  AGTATATGCAAGAAACCTGAAGAAAACAAGCTTCATTTTTATGCATCTTA  1149
      ||| ||||  |||||| |||||||||| ||| ||| ||| ||||| ||||
seq2  AGT-TATGGCAGAAACTTGAAGAAAAC-AGC-TCA-TTTAATGCA-CTTA  1134

seq1  TACTGAGCCTATTACCACAAGTGGTG  1175
      | |||||||||  | | |||||||||
seq2  TCCTGAGCCTA--AAC-CAAGTGGTG  1157