BAC Information

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BAC

Clone NameB6Ng01-006P12
Chromosome1 (Build37)
Map Location 114,677,886 - 114,818,226
singlet/doubletdoublet
Overlap geneLOC666635
Upstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006P12.bB6Ng01-006P12.g
ACCDH843679DH843680
length935974
definitionDH843679|Mus musculus domesticus DNA, BAC clone: B6Ng01-006P12, 5' end.DH843680|Mus musculus domesticus DNA, BAC clone: B6Ng01-006P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,817,291 - 114,818,226)(114,677,886 - 114,678,862)
sequence
gaattctgttgaaatctgaaatgctaaaataatatatagagaaaatgtta
ttcttaactatataaaaacacacagtttatgtctcaagagtttgaccaaa
catatgtgtttacttttcatttatccagaaattgtgtgatgattagagta
ggtaaacaataatagcaatatattctgacacatgtggccacgatgtgcat
gcagccaggaaataagcctttcacatatcaaaccagtaaaaacttttgta
atgttataaacatgtgacatttgatgactgcaatactctgaagcattttc
tggcgaccttcctactcctatcagactgattgcacaggaatagaatgttt
aaaagctccatgtgacactccagctatgagttcttgtgctcttctgtctg
gcatttaagcctttctagtatacgctccaaacttccccttcctatgttac
aatatattcctgtggtataattattctagtgttagttttcctgtgtttat
gtgtgtgtttgtgtgtatgtgtgtgtctgtgcggctacatgctatttata
ttcattcatatgcatgcataaatgtggagaccagaagaaaacattggtaa
caagcctgtggagccatccttgcttattatcctttgtttttgttttgttt
cgtttttgttttcttgcatgatttgtatttgtttgtttttctttttgttt
ttgttttgttgttttgtttattagttttgagaaagttgtccccattttta
tacagagctatcaattcaaggcatacatttggcagcaagcctatgggggc
tatttcacatttgaacagtatcatagtttttcagatcttctgattaatgg
gggctaaagaaaagatcatctgactttagatacctcagggcataacttct
ttttacaaattccaccttcatttagcagtattgtt
gaattctcctggccaactccaccagattggaactgtagagatatccagcc
ttgtccatggaataacaactagattcttagtttttctatagagagagaac
tattgaactacaaagaaaactggtgtaagtcagtctactaaattaatgtt
ttgcttctttgtgtgcttgtgtgtgtgtatgtttgtgtgttcaacctatc
agttctgtcttttgagaatcctgactaatacaaatcctcctttctattta
cacagattaccagtaggggccaagtctgtctctgtccagatggtttcatt
ctgtgctttttcttggaaagcctagacattcagattattagtgtcctcag
cagagaagaacaagactgtttaaaagattatggagagctcccagtcttcc
aactatctccaattctacctgtaatggaccacactttttatagtcccatg
agttgtatattaataaaatcagttcttttgtgcctattgcaggcaccaat
gaatgaaataatctgaagcagatacacagtgcagcctaagaacagggatg
tagcacaataacaatgaggcttgctacacagagcttctgctgtaggcttc
tttgtttcgttcttcagaagaaaaaaaatcaagaaataatatgtcccaag
aacatccagagagtgctatattaaatagcagtacttcatcaagtagaact
atgctctgggttattctgggcaccctgggtagcttcaccggggccacaac
ttctggtagtagctgaattacagggaaatggaagcagaaacttactgctt
ttggtctgcttttcttcagtgttcctggaaagtttgccaattggaactgc
cagaattatttccagagtggtttgtacagctgcatcccaccagttatggg
agagtgttcttctttctcacacttcaccagcatctgctgtcacaagggga
ttttgatcttagccattttgactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_114817291_114818226
seq2: B6Ng01-006P12.b_47_981 (reverse)

seq1  AACAATACTGGCTAAATGAGGGT-GAATTTGTAAAAGGGAGTTATGCCCT  49
      ||||||||| ||||||||| ||| |||||||||||| | |||||||||||
seq2  AACAATACT-GCTAAATGAAGGTGGAATTTGTAAAAAGAAGTTATGCCCT  49

seq1  GAGGGTATCCTAAATGTCAGAAGCTACTTTCTTTGAGCCCCATTAATCAT  99
      || ||||| ||||| |||||| | |  |||||||   |||||||||||| 
seq2  GA-GGTAT-CTAAA-GTCAGATGATCTTTTCTTTAGCCCCCATTAATCA-  95

seq1  GAAGATCTGAAAAACTATGATACTGTTCAAATGTGAAATAGCCCCCATAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCTGAAAAACTATGATACTGTTCAAATGTGAAATAGCCCCCATAG  145

seq1  GCTTGCTGCCAAATGTATGCC-TGAATTGATAGCTCTGTAT-AAAATGGG  197
      ||||||||||||||||||||| ||||||||||||||||||| ||||||||
seq2  GCTTGCTGCCAAATGTATGCCTTGAATTGATAGCTCTGTATAAAAATGGG  195

seq1  GACAACTTTCTCAAAACTAATAAACAAAACAACAAAACAAAAACAAAAAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTTTCTCAAAACTAATAAACAAAACAACAAAACAAAAACAAAAAG  245

seq1  AAAAACAAACAAATACAAATCATGCAAGAAAAC-AAAACGAAACAAAACA  296
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAAAACAAACAAATACAAATCATGCAAGAAAACAAAAACGAAACAAAACA  295

seq1  AAAACAAAGGATAATAAGCAAGGATGGCTCCACAGGCTTGTTACCAATGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGGATAATAAGCAAGGATGGCTCCACAGGCTTGTTACCAATGT  345

seq1  TTTCTTCTGGTCTCCACATTTATGCATGCATATGAATGAATATAAATAGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTGGTCTCCACATTTATGCATGCATATGAATGAATATAAATAGC  395

seq1  ATGTAGCCGCACAGACACACACATACACACAAACACACACATAAACACAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCCGCACAGACACACACATACACACAAACACACACATAAACACAG  445

seq1  GAAAACTAACACTAGAATAATTATACCACAGGAATATATTGTAACATAGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAACACTAGAATAATTATACCACAGGAATATATTGTAACATAGG  495

seq1  AAGGGGAAGTTTGGAGCGTATACTAGAAAGGCTTAAATGCCAGACAGAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAAGTTTGGAGCGTATACTAGAAAGGCTTAAATGCCAGACAGAAG  545

seq1  AGCACAAGAACTCATAGCTGGAGTGTCACATGGAGCTTTTAAACATTCTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAGAACTCATAGCTGGAGTGTCACATGGAGCTTTTAAACATTCTA  595

seq1  TTCCTGTGCAATCAGTCTGATAGGAGTAGGAAGGTCGCCAGAAAATGCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTGCAATCAGTCTGATAGGAGTAGGAAGGTCGCCAGAAAATGCTT  645

seq1  CAGAGTATTGCAGTCATCAAATGTCACATGTTTATAACATTACAAAAGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTATTGCAGTCATCAAATGTCACATGTTTATAACATTACAAAAGTT  695

seq1  TTTACTGGTTTGATATGTGAAAGGCTTATTTCCTGGCTGCATGCACATCG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGGTTTGATATGTGAAAGGCTTATTTCCTGGCTGCATGCACATCG  745

seq1  TGGCCACATGTGTCAGAATATATTGCTATTATTGTTTACCTACTCTAATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACATGTGTCAGAATATATTGCTATTATTGTTTACCTACTCTAATC  795

seq1  ATCACACAATTTCTGGATAAATGAAAAGTAAACACATATGTTTGGTCAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACAATTTCTGGATAAATGAAAAGTAAACACATATGTTTGGTCAAA  845

seq1  CTCTTGAGACATAAACTGTGTGTTTTTATATAGTTAAGAATAACATTTTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAGACATAAACTGTGTGTTTTTATATAGTTAAGAATAACATTTTC  895

seq1  TCTATATATTATTTTAGCATTTCAGATTTCAACAGAATTC  936
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATATTATTTTAGCATTTCAGATTTCAACAGAATTC  935

seq1: chr1_114677886_114678862
seq2: B6Ng01-006P12.g_68_1041

seq1  GAATTCTCCTGGCCAACTCCACCAGATTGGAACTGTAGAGATATCCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGGCCAACTCCACCAGATTGGAACTGTAGAGATATCCAGCC  50

seq1  TTGTCCATGGAATAACAACTAGATTCTTAGTTTTTCTATAGAGAGAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCATGGAATAACAACTAGATTCTTAGTTTTTCTATAGAGAGAGAAC  100

seq1  TATTGAACTACAAAGAAAACTGGTGTAAGTCAGTCTACTAAATTAATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAACTACAAAGAAAACTGGTGTAAGTCAGTCTACTAAATTAATGTT  150

seq1  TTGCTTCTTTGTGTGCTTGTGTGTGTGTATGTTTGTGTGTTCAACCTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCTTTGTGTGCTTGTGTGTGTGTATGTTTGTGTGTTCAACCTATC  200

seq1  AGTTCTGTCTTTTGAGAATCCTGACTAATACAAATCCTCCTTTCTATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGTCTTTTGAGAATCCTGACTAATACAAATCCTCCTTTCTATTTA  250

seq1  CACAGATTACCAGTAGGGGCCAAGTCTGTCTCTGTCCAGATGGTTTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATTACCAGTAGGGGCCAAGTCTGTCTCTGTCCAGATGGTTTCATT  300

seq1  CTGTGCTTTTTCTTGGAAAGCCTAGACATTCAGATTATTAGTGTCCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTTTTTCTTGGAAAGCCTAGACATTCAGATTATTAGTGTCCTCAG  350

seq1  CAGAGAAGAACAAGACTGTTTAAAAGATTATGGAGAGCTCCCAGTCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAGAACAAGACTGTTTAAAAGATTATGGAGAGCTCCCAGTCTTCC  400

seq1  AACTATCTCCAATTCTACCTGTAATGGACCACACTTTTTATAGTCCCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCTCCAATTCTACCTGTAATGGACCACACTTTTTATAGTCCCATG  450

seq1  AGTTGTATATTAATAAAATCAGTTCTTTTGTGCCTATTGCAGGCACCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTATATTAATAAAATCAGTTCTTTTGTGCCTATTGCAGGCACCAAT  500

seq1  GAATGAAATAATCTGAAGCAGATACACAGTGCAGCCTAAGAACAGGGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAATAATCTGAAGCAGATACACAGTGCAGCCTAAGAACAGGGATG  550

seq1  TAGCACAATAACAATGAGGCTTGCTACACAGAGCTTCTGCTGTAGGCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAATAACAATGAGGCTTGCTACACAGAGCTTCTGCTGTAGGCTTC  600

seq1  TTTGTTTCGTTCTTCAGAAGAAAAAAAATCAAGAAATAATATGTCCCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCGTTCTTCAGAAGAAAAAAAATCAAGAAATAATATGTCCCAAG  650

seq1  AACATCCAGAGAGTGCTATATTAAATAGCAGTACTTCATCAAGTAGAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCAGAGAGTGCTATATTAAATAGCAGTACTTCATCAAGTAGAACT  700

seq1  ATGCTCTGGGTTATTCTGGGCACCCTGGGTAGCTTCACCGGGGCCACAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTGGGTTATTCTGGGCACCCTGGGTAGCTTCACCGGGGCCACAAC  750

seq1  TTCTGGTAGTAGCTGAATTACAGGGAAATGGAAGCAGAAACTTACTGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTAGTAGCTGAATTACAGGGAAATGGAAGCAGAAACTTACTGCTT  800

seq1  TTGGTCTGCTTTTCTTCAGTGTTCCTGGAAAGTTTGCCAATTGGAACTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTGCTTTTCTTCAGTGTTCCTGGAAAGTTTGCCAATTGGAACTGC  850

seq1  CAGAATAATTTCCAGAGTGG-TTGTACAAGCTTGCAATCCCACCAGTAAT  899
      |||||| ||||||||||||| |||||| ||| ||| ||||||||||| ||
seq2  CAGAATTATTTCCAGAGTGGTTTGTAC-AGC-TGC-ATCCCACCAGTTAT  897

seq1  GGAAGAGTGTTCCTCTTTCTCCACAACTTCACCAGCATCTGCTGTCAC-A  948
      || ||||||||| ||||||| ||| ||||||||||||||||||||||| |
seq2  GGGAGAGTGTTCTTCTTTCT-CAC-ACTTCACCAGCATCTGCTGTCACAA  945

seq1  GGGGATTTTGATCTTAGCCATTTTGACTG  977
      |||||||||||||||||||||||||||||
seq2  GGGGATTTTGATCTTAGCCATTTTGACTG  974