BAC Information

Click to search

BAC

Clone NameB6Ng01-007A06
Chromosome1 (Build37)
Map Location 172,456,684 - 172,456,878
singlet/doubletsinglet
Overlap geneNos1ap
Upstream geneNuf2, Rgs5, Rgs4, LOC100039960, 1700084C01Rik, Hsd17b7, Ddr2, LOC100040571, Uap1, Uhmk1, Sh2d1b2, EG622708, Sh2d1b1, EG665574, 1700015E13Rik
Downstream geneLOC100040002, LOC640532, Olfml2b, Atf6, Dusp12, Fcrlb, Fcrla, LOC100040778, Fcgr2b, Fcgr4, Fcgr3, 1700009P17Rik, Sdhc, Mpz, Pcp4l1, Nr1i3, Tomm40l, Apoa2, Fcer1g, Ndufs2, Adamts4, B4galt3, Ppox, Usp21, Ufc1, EG622236, Dedd, Nit1, Pfdn2, 1190002J23Rik, Pvrl4, Arhgap30, Usf1, EG226654, F11r, Refbp2, Itlna
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007A06.bB6Ng01-007A06.g
ACCDH843713DH843714
length195899
definitionDH843713|Mus musculus domesticus DNA, BAC clone: B6Ng01-007A06, 5' end.DH843714|Mus musculus domesticus DNA, BAC clone: B6Ng01-007A06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aagacatcgagaaattgtaggccagcaagattgctcagcaggtacagaca
cctgttgccaagtctgatgacctgagttggatcatcgagatgcacgcaat
aaaatggaagaatcgtcgccctcacactgtggttctctctctctctctct
ctctctctctctctctctctctctctctctctctctctctctctc
gaattcagcccgtgttgactgaaaaggacagttgagcaaactagctcgca
caggagccagggcagattcgtggccaaaggtctgttgtgctcagagaaga
gtccaactggctaacaggtaaggtcttaaacagccggtgtcacctcagtg
ctaaaactgctcttgaacaatcatggagggtttaggtggctccttgcact
tagctgggtttcaagaatcatgttcaaatggtccaggacggagtgcatag
gaatcagcttgcgaaaaaggagttcttcaaaaggctcggagcgctgccat
gatagctattcttggttgtctacttgaccacatctgaaattaggaaaacc
caaatggctaggcacacctggaaagggtttttttaaaaaaaaaaaaacta
attaaatcatttgaagaagaaagagccacttttaagacacatctttaatc
caggtctttcaatgagggaagatgcatcgttaatctgggccataccttct
gctggtagcctatataaaggacgtggaagaaggaagctgcctttcttttg
ccagcttgttctctgttgtggatgtccctggtgcggtttgtattttgatg
ttaattctgctttcccaggagggattgtctagaacaaggaatgagtcaca
tactcaggtgacttcttttcaaccttcccctaataaaggaaccaatccct
gacgagtgggcaggacttctgggctagacagaagagaggaggcaggagag
agatttgggctttttggatgaggacagtgaaaggacaagatgtaatttac
tagtgtctcccagtttagatggcaaatccaccaggatccactaccggagg
atttaagatttaatatggcgtacaagactaggattctagttgaatcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_172456684_172456878
seq2: B6Ng01-007A06.b_50_244

seq1  AAGACATCGAGAAATTGTAGGCCAGCAAGATTGCTCAGCAGGTACAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATCGAGAAATTGTAGGCCAGCAAGATTGCTCAGCAGGTACAGACA  50

seq1  CCTGTTGCCAAGTCTGATGACCTGAGTTGGATCATCGAGATGCACGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGCCAAGTCTGATGACCTGAGTTGGATCATCGAGATGCACGCAAT  100

seq1  AAAATGGAAGAATCGTCGCCCTCACACTGTGGTTCTCTCTCTCTCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGAAGAATCGTCGCCCTCACACTGTGGTTCTCTCTCTCTCTCTCT  150

seq1  CTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTC  195
      |||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  195