BAC Information

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BAC

Clone NameB6Ng01-008B07
Chromosome1 (Build37)
Map Location 123,736,832 - 123,737,790
singlet/doubletsinglet
Overlap genenone
Upstream geneAI848258, Insig2, Ccdc93, LOC100041926, Htr5b, LOC666656, Ddx18
Downstream geneLOC666971
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008B07.bB6Ng01-008B07.g
ACCDH844459DH844460
length9571,185
definitionDH844459|Mus musculus domesticus DNA, BAC clone: B6Ng01-008B07, 5' end.DH844460|Mus musculus domesticus DNA, BAC clone: B6Ng01-008B07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaacattcttaagtagtagtaaatctacatagcttgaggcca
gcaaggactacagaagaccttatctcaaaaataaatatatttttaaggat
ttattatttttaattatgcatgtgtgcacatgtgtgtaggtacgtagagg
gtgatcctgcatagcccagaggtggaattacacatgattgtgagctgcct
gacaagggtgctgggaaacaaacttgaatcctcagcaagagcagtatgtg
tccttaatcactaagtaatctacccagctcccccaaaacgtaatttctgt
ttctcaattatggcttgttaaatatgcacgtgtgtgtatgtgtgtgtgtt
tgcacatgtgtgcaagcataatagtaaaatgacgaaaagaaccagttaaa
agcaaaaagacagtaatagtacatttccaagagaaaacagggcttacttg
tgtttgggacaaccatagtatggctgaggcatgtcattctttataagact
caagaattaaggatggtgggcgtcacgccctaacgacactgatcttctgt
gaacaggagcccttgaagagtaagcaaaagactggcattaacagaaagaa
actgcctaaagagcggcttcttaggaagaccaagaccctaaatatccctg
ccaattctttctagctgcaaaatgttctatccactaaaggccatctattt
gtaccactccacagttttgttttgttctgttttgttttgttttgttttca
atatggccacaaagaggaggaggtaccttagttagtaaaaacgcttgtct
cacaagtgtgaggacttgagtttggatagatgggattcacataagaaaca
ggcacagtgatatgctcctgcaatcccaatgatagtaagatagacacatg
tagatctataaaacctcactgccagtagccaggtattgtggtgcaagttc
tggccca
gaattctcacctgaggaataccgaatgacagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacatcagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
ggaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggagaatggatacagaaaatgtggtacatcta
cacaatggagtactactcagctattaaaaagaatgaatttatgaaattcc
taggcaaatggatggacctggagagcatcatcctgagtgaggtaacacat
tcacaaaggaactcacacaatatgtactcactgataagtggatattagcc
ccaaacctaggatacccaagatataagatacaatttgctaaacacatgaa
actcaagaaaaatgaagactgaagtgtggacactatgcccctccttagaa
ttgggaacaaaacacccataaggagttacagagacaaagtttggagctga
gatgagaggatggaccatgtagagactgccatatccagggatccacccca
taatcagcatccaaacgctgacaccattgcatacactagcaggatttatt
gaaaggacccagatgtagctgtctcttgtgagactatgccggggcctagc
aaacacagaagtggatgatcacagtcagctaatggatagatcacagggct
ctcaatggaagagctagagaaagtagtcaaggagcttaaagggatctgca
tcttataagcggacaacattatgactaaccagtacgcagagcttcttgac
tttagctgcatttgtatcaaagaatgcctagtcggcatcactggaaagaa
agccattgggacacgcaactttatatgcccagtacagaggaaatgccaga
gccaaaaaagctaaatggggtgtgatgtagaggcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_123736832_123737790
seq2: B6Ng01-008B07.b_43_999 (reverse)

seq1  TGGGCCAGAACTTGGCACAC-ATACCTGGCTAACTGGCAGGTGAGGTTTT  49
      ||||||||||||||   ||| |||||||||| ||||||| ||||||||||
seq2  TGGGCCAGAACTTGCACCACAATACCTGGCT-ACTGGCA-GTGAGGTTTT  48

seq1  ATAGATCTACCTGTGTCTATCTTACTATCATTGGGATTGCAGGAGCATAT  99
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCTACATGTGTCTATCTTACTATCATTGGGATTGCAGGAGCATAT  98

seq1  CACTGTGCCTGGTTTCTTATGTGAATCCCATCTATCCAAACTCAAGTCCT  149
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGCCT-GTTTCTTATGTGAATCCCATCTATCCAAACTCAAGTCCT  147

seq1  CACACTTGTGAGACAAGCGTTTTTACTAACTAAGGTACCTCCTCCTCTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTGTGAGACAAGCGTTTTTACTAACTAAGGTACCTCCTCCTCTTT  197

seq1  GTGGCCATATTGAAAACAAAACAAAACAAAACAGAACAAAACAAAACTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCATATTGAAAACAAAACAAAACAAAACAGAACAAAACAAAACTGT  247

seq1  GGAGTGGTACAAATAGATGGCCTTTAGTGGATAGAACATTTTGCAGCTAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGTACAAATAGATGGCCTTTAGTGGATAGAACATTTTGCAGCTAG  297

seq1  AAAGAATTGGCAGGGATATTTAGGGTCTTGGTCTTCCTAAGAAGCCGCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTGGCAGGGATATTTAGGGTCTTGGTCTTCCTAAGAAGCCGCTC  347

seq1  TTTAGGCAGTTTCTTTCTGTTAATGCCAGTCTTTTGCTTACTCTTCAAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCAGTTTCTTTCTGTTAATGCCAGTCTTTTGCTTACTCTTCAAGG  397

seq1  GCTCCTGTTCACAGAAGATCAGTGTCGTTAGGGCGTGACGCCCACCATCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGTTCACAGAAGATCAGTGTCGTTAGGGCGTGACGCCCACCATCC  447

seq1  TTAATTCTTGAGTCTTATAAAGAATGACATGCCTCAGCCATACTATGGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCTTGAGTCTTATAAAGAATGACATGCCTCAGCCATACTATGGTT  497

seq1  GTCCCAAACACAAGTAAGCCCTGTTTTCTCTTGGAAATGTACTATTACTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAAACACAAGTAAGCCCTGTTTTCTCTTGGAAATGTACTATTACTG  547

seq1  TCTTTTTGCTTTTAACTGGTTCTTTTCGTCATTTTACTATTATGCTTGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGCTTTTAACTGGTTCTTTTCGTCATTTTACTATTATGCTTGCA  597

seq1  CACATGTGCAAACACACACACATACACACACGTGCATATTTAACAAGCCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGCAAACACACACACATACACACACGTGCATATTTAACAAGCCA  647

seq1  TAATTGAGAAACAGAAATTACGTTTTGGGGGAGCTGGGTAGATTACTTAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGAAACAGAAATTACGTTTTGGGGGAGCTGGGTAGATTACTTAG  697

seq1  TGATTAAGGACACATACTGCTCTTGCTGAGGATTCAAGTTTGTTTCCCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAGGACACATACTGCTCTTGCTGAGGATTCAAGTTTGTTTCCCAG  747

seq1  CACCCTTGTCAGGCAGCTCACAATCATGTGTAATTCCACCTCTGGGCTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTGTCAGGCAGCTCACAATCATGTGTAATTCCACCTCTGGGCTAT  797

seq1  GCAGGATCACCCTCTACGTACCTACACACATGTGCACACATGCATAATTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATCACCCTCTACGTACCTACACACATGTGCACACATGCATAATTA  847

seq1  AAAATAATAAATCCTTAAAAATATATTTATTTTTGAGATAAGGTCTTCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATAAATCCTTAAAAATATATTTATTTTTGAGATAAGGTCTTCTG  897

seq1  TAGTCCTTGCTGGCCTCAAGCTATGTAGATTTACTACTACTTAAGAATGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTTGCTGGCCTCAAGCTATGTAGATTTACTACTACTTAAGAATGT  947

seq1  TCTTGAATTC  959
      ||||||||||
seq2  TCTTGAATTC  957