BAC Information

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BAC

Clone NameB6Ng01-008D10
Chromosome1 (Build37)
Map Location 22,890,027 - 22,890,183
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnq5, LOC435612, LOC100040338, Rims1, Rims1
Downstream geneEG665725, LOC665731, 4933415F23Rik, Rn4.5s-ps4, EG623356, Ogfrl1, LOC665782, B3gat2, Smap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008D10.bB6Ng01-008D10.g
ACCDH844548DH844549
length506162
definitionDH844548|Mus musculus domesticus DNA, BAC clone: B6Ng01-008D10, 5' end.DH844549|Mus musculus domesticus DNA, BAC clone: B6Ng01-008D10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tccagctacagctctgctttcaaaaatagttttcagaattatgtttaaat
ttaattttgtttaaatcaaaaaataatggtaatatgtgttctagttgtat
ttctgtgactgtgctaaaataccctgccaaaaagtagcataggacaaaaa
aggaggtttttattttttcatcttacaattcttttttaaaaatttttatt
agatattttctttatttatatttcaaatgttatccactttcttcatttcc
tttccaaaaaatcccccttcgcatccctccttgccctgctcactaaccca
cccactcccacctcaccatcctagcattcccttacactggggcatcaagc
ctcaacaggaccaagggcctctcctctcattgatgtcccacaaggccatc
ctctgctacatatgtggctagagccatgggccccactgcgtgtactcttt
ggttggtgttttattccctgggagctctggcagtacaattagttacagct
cagcat
attaaaacccgcacagtaaggtagtgattgataacttggtatattcaggg
ttgtttgggggaggatgaaacgtttcttagttttctagaaattagttatt
catcattctgaagtcgagagagagagagagaaaggagagagaaagggagg
gagagagggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_22890027_22890183
seq2: B6Ng01-008D10.g_79_235

seq1  AACCCGCACAGTAAGGTAGTGATTGATAACTTGGTATATTCAGGGTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGCACAGTAAGGTAGTGATTGATAACTTGGTATATTCAGGGTTGTT  50

seq1  TGGGGGAGGATGAAACGTTTCTTAGTTTTCTAGAAATTAGTTATTCATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGGATGAAACGTTTCTTAGTTTTCTAGAAATTAGTTATTCATCA  100

seq1  TTCTGAAGTCGAGAGAGAGAGAGAGAAAGGAGAGAGAAAGGGAGGGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCGAGAGAGAGAGAGAGAAAGGAGAGAGAAAGGGAGGGAGAG  150

seq1  AGGGAGC  157
      |||||||
seq2  AGGGAGC  157