BAC Information

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BAC

Clone NameB6Ng01-008P04
Chromosome1 (Build37)
Map Location 66,531,728 - 66,532,875
singlet/doubletsinglet
Overlap geneC030018G13Rik
Upstream geneEG628894, LOC100043165, LOC383520, EG667775, Crygf, LOC667781, EG667786, Mtap2
Downstream geneRpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008P04.bB6Ng01-008P04.g
ACCDH845029DH845030
length1,1381,141
definitionDH845029|Mus musculus domesticus DNA, BAC clone: B6Ng01-008P04, 5' end.DH845030|Mus musculus domesticus DNA, BAC clone: B6Ng01-008P04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagacaggacctagaccacatgactagatttcagtaccaagtcat
agcacacactgctaccacagttacccaatgtttctaagtcaacaccaaga
tgtagtacttgagtcttaccatacatgtcttacctcctgctggaaacaca
gatgctgatgccataaaatccggtttggagccttcctatacatgtcaagt
taaacttcctcttgcctgagtttttcatccattaatcagcataatgaatc
atcaatagagtagagtaacaaaaaagattaaagtacttaacatatttcaa
ttagttaggacaggacttggtatacattaagggttgggtagcccattcct
gtcttatttttattattatcaactcctaaacttcaaactcgttagtcaga
ataaagaaatgaatatataaattgcaaaatgagagatgcttgtctttact
ggttatttgatatcagttgtatcacacaagatttgatgtttgatgctttc
tttcaagggggtaatatcgtctgaaacctgaaaatgatgacagcatgtga
gataaaacgaacttacaatcttataaaatctgtgatgattttttttctat
catctttgtagccaaaagaagctctccaatcaacagtcagagtcagacct
gtgaatcacccaatcaagacaccaggcagcaaggagaggttagtttgtta
tgcttatgagaagaggggacgctttgagtagtacattgtaagggctcaga
cgtcccattagactcatagctaacatctctctcctccatcctggacatgc
agctttgctcagtctgatgtcttctgccagtcaaagtccaaaaatttaat
tttaagcaccttccaatagtctatgtgttgaaacaaaacagggtatgagt
attttatctcaacacccagtttatagaaaatagggctttttctgatggct
agaatgtaacaaaaagtattagctgaaaaaaaacagtttagctgtcattc
gtctagcatcaaataaaatgtcgtttgatctcccttcactatccatttat
ctgtgcaagtaaaacctggatgccttccgttaagtgggtctctttctgac
cttactccttaggaatagacatgatctccaataccctc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcataggctcccaa
tgagagctagagaagtagccaggagctaaagggatctgcaccctatagtg
acacatatgagctacagtacctcgagctctgactctagctgcatattatt
caaagatgctagtcgcatcctgcagaagtcatgactgcaacctttaattg
ccctagtagaactcagccaaagggaatggtggcagggaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_66531728_66532875
seq2: B6Ng01-008P04.b_46_1183

seq1  GAATTCAGACAGGACCTAGACCACATGACTAGATTTCAGTACCAAGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACAGGACCTAGACCACATGACTAGATTTCAGTACCAAGTCAT  50

seq1  AGCACACACTGCTACCACAGTTACCCAATGTTTCTAAGTCAACACCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACACTGCTACCACAGTTACCCAATGTTTCTAAGTCAACACCAAGA  100

seq1  TGTAGTACTTGAGTCTTACCATACATGTCTTACCTCCTGCTGGAAACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTACTTGAGTCTTACCATACATGTCTTACCTCCTGCTGGAAACACA  150

seq1  GATGCTGATGCCATAAAATCCGGTTTGGAGCCTTCCTATACATGTCAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGATGCCATAAAATCCGGTTTGGAGCCTTCCTATACATGTCAAGT  200

seq1  TAAACTTCCTCTTGCCTGAGTTTTTCATCCATTAATCAGCATAATGAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTCCTCTTGCCTGAGTTTTTCATCCATTAATCAGCATAATGAATC  250

seq1  ATCAATAGAGTAGAGTAACAAAAAAGATTAAAGTACTTAACATATTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAGAGTAGAGTAACAAAAAAGATTAAAGTACTTAACATATTTCAA  300

seq1  TTAGTTAGGACAGGACTTGGTATACATTAAGGGTTGGGTAGCCCATTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTAGGACAGGACTTGGTATACATTAAGGGTTGGGTAGCCCATTCCT  350

seq1  GTCTTATTTTTATTATTATCAACTCCTAAACTTCAAACTCGTTAGTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATTTTTATTATTATCAACTCCTAAACTTCAAACTCGTTAGTCAGA  400

seq1  ATAAAGAAATGAATATATAAATTGCAAAATGAGAGATGCTTGTCTTTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAATGAATATATAAATTGCAAAATGAGAGATGCTTGTCTTTACT  450

seq1  GGTTATTTGATATCAGTTGTATCACACAAGATTTGATGTTTGATGCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTTGATATCAGTTGTATCACACAAGATTTGATGTTTGATGCTTTC  500

seq1  TTTCAAGGGGGTAATATCGTCTGAAACCTGAAAATGATGACAGCATGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGGGGGTAATATCGTCTGAAACCTGAAAATGATGACAGCATGTGA  550

seq1  GATAAAACGAACTTACAATCTTATAAAATCTGTGATGATTTTTTTTCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAACGAACTTACAATCTTATAAAATCTGTGATGATTTTTTTTCTAT  600

seq1  CATCTTTGTAGCCAAAAGAAGCTCTCCAATCAACAGTCAGAGTCAGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTGTAGCCAAAAGAAGCTCTCCAATCAACAGTCAGAGTCAGACCT  650

seq1  GTGAATCACCCAATCAAGACACCAGGCAGCAAGGAGAGGTTAGTTTGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATCACCCAATCAAGACACCAGGCAGCAAGGAGAGGTTAGTTTGTTA  700

seq1  TGCTTATGAGAAGAGGGGACGCTTTGAGTAGTACATTGTAAGGGCTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATGAGAAGAGGGGACGCTTTGAGTAGTACATTGTAAGGGCTCAGA  750

seq1  CGTCCCATTAGACTCATAGCTAACATCTCTCTCCTCCATCCTGGACATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCATTAGACTCATAGCTAACATCTCTCTCCTCCATCCTGGACATGC  800

seq1  AGCTTTGCTCAGTCTGATGTCTTCTGCCAGTCAAAGTCCAAAAATTTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGCTCAGTCTGATGTCTTCTGCCAGTCAAAGTCCAAAAATTTAAT  850

seq1  TTTAAGCACCTTCCAATAGTCTATGTGTTGAAACAAAACAGGGTATGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCACCTTCCAATAGTCTATGTGTTGAAACAAAACAGGGTATGAGT  900

seq1  ATTTTATCTCAACAACCAGTTTATAGAAAATAGGGCTTTATCTTGATGGC  950
      |||||||||||||| |||||||||||||||||||||||| || |||||||
seq2  ATTTTATCTCAACACCCAGTTTATAGAAAATAGGGCTTTTTC-TGATGGC  949

seq1  TAGAATGTAACAAAAAGTATTAGCTGAAAAAAAAAACAGTATTAGCTGTC  1000
      ||||||||||||||||||||||||||  |||||||||||| |||||||||
seq2  TAGAATGTAACAAAAAGTATTAGCTG--AAAAAAAACAGT-TTAGCTGTC  996

seq1  ATTCGTCTAGCATCAAATAAAATGTCGTTTGATCTCCCTTCACTATCCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGTCTAGCATCAAATAAAATGTCGTTTGATCTCCCTTCACTATCCAT  1046

seq1  TTAATCTGTGCAAAGTAAAAACTTGATGCCTTCCGTTAAAGTTGGGTTCT  1100
      || |||||||| |||||||| || ||||||||||||| ||||  || |||
seq2  TT-ATCTGTGC-AAGTAAAACCTGGATGCCTTCCGTT-AAGT--GGGTCT  1091

seq1  CTTTCTGACATTTTACT-CTCAGGAATAG-CATGATCTTCCACTACCCTC  1148
      |||||||||   ||||| || |||||||| ||||||| |||| |||||||
seq2  CTTTCTGAC--CTTACTCCTTAGGAATAGACATGATC-TCCAATACCCTC  1138