BAC Information

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BAC

Clone NameB6Ng01-009C17
Chromosome1 (Build37)
Map Location 23,009,332 - 23,009,994
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435612, LOC100040338, Rims1, Rims1, EG665725, LOC665731
Downstream gene4933415F23Rik, Rn4.5s-ps4, EG623356, Ogfrl1, LOC665782, B3gat2, Smap1, 1110058L19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009C17.bB6Ng01-009C17.g
ACCDH845184DH845185
length993663
definitionDH845184|Mus musculus domesticus DNA, BAC clone: B6Ng01-009C17, 5' end.DH845185|Mus musculus domesticus DNA, BAC clone: B6Ng01-009C17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcggttgtttttggtggttagtttcttgagttcttcatatattt
tggatattagccctctatcggatatggggttagtgaagattttttttccc
aatctgtagatcgccgatttgtattattgactatgtcctttgcttacaga
agcttttcagtttcatgaggtcacatttatcaattcttgatcttagagca
tgagccatcagagttctgttcatagcagccttatttgtgatagccagaaa
ctggaaacaacccagatgttccacaactgaagaatggatacaggaaatgg
ggtgcatttacacaatggaatactactcagctattaagaacaagggcatc
ctgaattttgcaggcaaatgaatggaactagaaaatatcatcctgagtgg
ggtaactcagatccaaaaggtcatgcatggtatgtactcactaataagtg
gatattagccccccgaaaaagtacagaatacccaagatacagtccacagt
actcaaaaaggtcaacaagctgaagggcccaagtgaggacacctcagtcc
cacttgggagggagaagaaagcaatcactaatgtgagggaaggagggacc
tgagagggaacatagattgcggttggaggggagaggggaacctgatctgg
tatgggatgagggaaaaggaccgaagccctgagggccagcagaaagaatg
gaaacaggcaacctcaagaggtaggaggttggggggaccctccaggatac
accagaggcctgggatatcagagactactaggactcaaagggacaggcct
tagataaaatgtctgacagtaggaagagggaatttatagagcccacctcc
agcaggaagacagggcgtcaaatgagggagaggggggtcatcccacagtc
aaaactcctacccatattattcctgtctgaagaactacaggatggaaatg
gagagaatctgaagaatagaagttcatcacaagcccaagtgcg
gaattctatactgggcaatcagaggtatacaaagcagaaatattagcaga
taacacagaaagactgctctaaagtctcaggagctaaaactctagaaata
tgttataatgaataaaggaaagaattaaacaaaaatcattcattccagaa
acagccgctatctttaaaaatactcttatgcctacttctagcaaagttaa
ttgtattagaagataaacatgaattccaagtgaggaagagttgctacata
ttgaaaagtgtcttttgtccttgaaatattatgttcttttttagtctaat
caaaggttgagcagaatcttcttttgagaggaaatgtcagtaatagtctt
cacttctcccttgctatttatttctcccatgcacagaagggaatccgttc
catcagtcttgattcattaaaatggattgaaattgtgtctgttttgtctc
tattgaccttcatcattgaatgagattttgtcagctcttatcataaattt
ctcttgagattttggtgtcagttgtaatttccaggaattaataaagagag
agagggagaaagggatggaggagagagagacacacacacagaaagagaga
gagagagagagagagagaaagagagggagagagagagagagagagagaga
gagagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_23009332_23009994
seq2: B6Ng01-009C17.g_68_730

seq1  GAATTCTATACTGGGCAATCAGAGGTATACAAAGCAGAAATATTAGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATACTGGGCAATCAGAGGTATACAAAGCAGAAATATTAGCAGA  50

seq1  TAACACAGAAAGACTGCTCTAAAGTCTCAGGAGCTAAAACTCTAGAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGAAAGACTGCTCTAAAGTCTCAGGAGCTAAAACTCTAGAAATA  100

seq1  TGTTATAATGAATAAAGGAAAGAATTAAACAAAAATCATTCATTCCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAATGAATAAAGGAAAGAATTAAACAAAAATCATTCATTCCAGAA  150

seq1  ACAGCCGCTATCTTTAAAAATACTCTTATGCCTACTTCTAGCAAAGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCGCTATCTTTAAAAATACTCTTATGCCTACTTCTAGCAAAGTTAA  200

seq1  TTGTATTAGAAGATAAACATGAATTCCAAGTGAGGAAGAGTTGCTACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTAGAAGATAAACATGAATTCCAAGTGAGGAAGAGTTGCTACATA  250

seq1  TTGAAAAGTGTCTTTTGTCCTTGAAATATTATGTTCTTTTTTAGTCTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGTGTCTTTTGTCCTTGAAATATTATGTTCTTTTTTAGTCTAAT  300

seq1  CAAAGGTTGAGCAGAATCTTCTTTTGAGAGGAAATGTCAGTAATAGTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTTGAGCAGAATCTTCTTTTGAGAGGAAATGTCAGTAATAGTCTT  350

seq1  CACTTCTCCCTTGCTATTTATTTCTCCCATGCACAGAAGGGAATCCGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTCCCTTGCTATTTATTTCTCCCATGCACAGAAGGGAATCCGTTC  400

seq1  CATCAGTCTTGATTCATTAAAATGGATTGAAATTGTGTCTGTTTTGTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTCTTGATTCATTAAAATGGATTGAAATTGTGTCTGTTTTGTCTC  450

seq1  TATTGACCTTCATCATTGAATGAGATTTTGTCAGCTCTTATCATAAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACCTTCATCATTGAATGAGATTTTGTCAGCTCTTATCATAAATTT  500

seq1  CTCTTGAGATTTTGGTGTCAGTTGTAATTTCCAGGAATTAATAAAGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAGATTTTGGTGTCAGTTGTAATTTCCAGGAATTAATAAAGAGAG  550

seq1  AGAGGGAGAAAGGGATGGAGGAGAGAGAGACACACACACAGAAAGAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGAAAGGGATGGAGGAGAGAGAGACACACACACAGAAAGAGAGA  600

seq1  GAGAGAGAGAGAGAGAGAAAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAAAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGA  650

seq1  GAGAGAGAGAGAG  663
      |||||||||||||
seq2  GAGAGAGAGAGAG  663