BAC Information

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BAC

Clone NameB6Ng01-009I11
Chromosome1 (Build37)
Map Location 94,996,327 - 94,996,478
singlet/doubletsinglet
Overlap geneKif1a
Upstream geneHdac4, LOC100040419, LOC665883, Ndufa10, Olfr1416, Olfr1415, Olfr1414, Olfr1413, Olfr1412, Olfr1411, Olfr1410, Olfr12, Myeov2, Otos, Gpc1, Ankmy1, Dusp28, LOC100040511, Rnpepl1, Capn10, Gpr35, Aqp12
Downstream geneAgxt, 2310007B03Rik, E030010N08Rik, Sned1, Mterfd2, LOC665966, Pask, Ppp1r7, Tmem16g, Hdlbp, Sept2, Farp2, Stk25, Bok, Thap4, Atg4b, Dtymk, Ing5, D2hgdh, Gal3st2, LOC100041596, EG666009, EG619597, Neu4, Pdcd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009I11.bB6Ng01-009I11.g
ACCDH845445DH845446
length152860
definitionDH845445|Mus musculus domesticus DNA, BAC clone: B6Ng01-009I11, 5' end.DH845446|Mus musculus domesticus DNA, BAC clone: B6Ng01-009I11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aacacatcagctctggctttgtgcagagcacaggtctccacctgtctgag
gctggcgcagtctgcagcttccatgctccctctgaacagggaactagcag
ccttaagaagaaatgcacccagcctgagcagtacaggattgggggggggg
gg
gaattcaaaaagaactagaaagggtgagcttacttagcagcaatcctctg
agataccaattatatcaggtgaataaaagttacttttgccgggcagtggt
ggcgcacgcctttaatcccagcacttgggatgcagaggcaggcggatttc
tgagttcgaagccagcctggtctacaaagtgagttccagaacaaccaggg
ctacacagagaaaccctgtcttgaaaaacaacaacaacaacaacaacaac
aacaacaacaacaacaacaaagttacttttataagtcctgtgtggcctgt
aacactacactgatgactttactctgggcttgcatggttccttgtgagca
ctgattgctgcccttgcttccctggatgtgaagggttcctttcttttgct
gacttaggtttttaaaagatggtttatttttatttatgggtatgtatatg
ccacattagtacaggtgccaggggccggaagagggttccggatctcctag
agctgtagacacggctgggctgatcaccccattactcgagtcctctacaa
gagcagcaggggatttatctcccagcccctgagccttctcttcagctccc
cttacctcccacaaaatgctttgaagatgaattctttatcgctgatgtct
agaggagtggtcatagtgtgactctggtttttctcatgcgttttcttgaa
aacattgggtgtagttttcattaatttgggaactgtgtggctactccttc
tgtttgtgaactctctcccccactgctgcttcctttccaaacttcagggc
acgtgccagatgttcactgttattttacagcccctggggctcaatacttc
ctccagtcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_94996327_94996478
seq2: B6Ng01-009I11.b_56_207

seq1  AACACATCAGCTCTGGCTTTGTGCAGAGCACAGGTCTCCACCTGTCTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATCAGCTCTGGCTTTGTGCAGAGCACAGGTCTCCACCTGTCTGAG  50

seq1  GCTGGCGCAGTCTGCAGCTTCCATGCTCCCTCTGAACAGGGAACTAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCGCAGTCTGCAGCTTCCATGCTCCCTCTGAACAGGGAACTAGCAG  100

seq1  CCTTAAGAAGAAATGCACCCAGCCTGAGCAGTACAGGATTGGGGGGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGAAGAAATGCACCCAGCCTGAGCAGTACAGGATTGGGGGGGGGG  150

seq1  GG  152
      ||
seq2  GG  152