BAC Information

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BAC

Clone NameB6Ng01-010D05
Chromosome1 (Build37)
Map Location 149,954,048 - 150,026,891
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010D05.bB6Ng01-010D05.g
ACCDH845935DH845936
length6561,161
definitionDH845935|Mus musculus domesticus DNA, BAC clone: B6Ng01-010D05, 5' end.DH845936|Mus musculus domesticus DNA, BAC clone: B6Ng01-010D05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,026,236 - 150,026,891)(149,954,048 - 149,955,211)
sequence
gaattcttatgattttgatcttattatctatgaaaagataaaaataggta
ttaatgatcaatataattgaattatagtataaattatattaaacattatc
cattaacaatatgtgtgttcattcaatttcttcacttttgaaagaatcat
tcttttgataaacaatataggcatgcagaaagacacttaaatgaaatttt
atattattctgtgcctaatatatgaatgtggtttcagttaggatgtttca
gcctcactcactctttatgaaatgaacaacttttggaggtttcttgataa
gatctcaaattctgacaatgctttccctaacctacaaaaacttagcaatg
catcttggttaaattctaatttgaataattgaattccgcctgcatatctg
acttcttccatttcctagtacaccatgtagtcttgttattttctgctttg
aattgagaactgttgcagctggagtcactaaggccacgtgatgacagcct
aggattttatttgctttgctgatgttacagtagcactaccttcagtctcc
ttctgtttcaattttagtctttgtggaactttaacattccttgatttcag
tttttaagaaaaagtaaacaagaagaggagaaggaggaggaggaggagga
ggagga
gaattctctcacatccctggtgtctgagactctctagataccccacttca
cacatacacatacactgctacttattcctattcattctcttggccctctg
gggtttctctcctgactcccaccatacttgatcctgccccccttttctgt
aaactcacataattgtgcaagtgatactaaattcaatttttataattttg
tattatggaaactgagatatttgattttagcagaagaaacaacatgttaa
atccttatgaaaagatttaaaatcaattttgtgggatgaataatgatcaa
acatatcagggataatgttaagaactcataaaattatattataaagaatg
actattttagccataaaaatgttctaaagattaactctaggagtatatat
attctctataggactatatcattttgctaaattcccagcccaggaacaag
atagtgttcaaggtttgtttaaattatagttcttgaaaactatccatatt
tggacactaaataaaagcaatactgtcctcataagataaatgccaggaaa
aaaatgttcatatagtaaaaacagaattctattggtctcatagacagaag
ttggagctatgcacacactagtcaaagaataaagatagttactagattat
gggatatttaggaaatagatttgcccctggatcatattaataacagttgg
atttcttatgtggttactcagaaaagttgggtgactagaaaattttcata
acattaactagcaagtcacagtgttaattaatattgctctacttactaga
taacatcagtaaaggtaggcacatattgacagaaagggaaatcggataca
gagctatacagtgaattcttaacaggcaaacatttaatgtctaggaagta
ctcaaagaaatgttcaatatccttagtcaccagtgaaatactaatcataa
tgattctgagattccatcttatacctgtcaaatggctaagatcaagactc
aagcacagcacatgctggccaggatgtgggagcatggggaatatttcatt
tcattactggtaggagtgaaacttgtacaacttactgtggaaatctaatt
ggggattctcaaaaattggaatctttcttacctcagaacagcatatacct
ccttgacatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150026236_150026891
seq2: B6Ng01-010D05.b_48_703 (reverse)

seq1  TCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCTTCTTGTTTACTTTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCTTCTTGTTTACTTTTTCT  50

seq1  TAAAAACTGAAATCAAGGAATGTTAAAGTTCCACAAAGACTAAAATTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTGAAATCAAGGAATGTTAAAGTTCCACAAAGACTAAAATTGAA  100

seq1  ACAGAAGGAGACTGAAGGTAGTGCTACTGTAACATCAGCAAAGCAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGGAGACTGAAGGTAGTGCTACTGTAACATCAGCAAAGCAAATAA  150

seq1  AATCCTAGGCTGTCATCACGTGGCCTTAGTGACTCCAGCTGCAACAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTAGGCTGTCATCACGTGGCCTTAGTGACTCCAGCTGCAACAGTTC  200

seq1  TCAATTCAAAGCAGAAAATAACAAGACTACATGGTGTACTAGGAAATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCAAAGCAGAAAATAACAAGACTACATGGTGTACTAGGAAATGGA  250

seq1  AGAAGTCAGATATGCAGGCGGAATTCAATTATTCAAATTAGAATTTAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCAGATATGCAGGCGGAATTCAATTATTCAAATTAGAATTTAACC  300

seq1  AAGATGCATTGCTAAGTTTTTGTAGGTTAGGGAAAGCATTGTCAGAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCATTGCTAAGTTTTTGTAGGTTAGGGAAAGCATTGTCAGAATTT  350

seq1  GAGATCTTATCAAGAAACCTCCAAAAGTTGTTCATTTCATAAAGAGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCTTATCAAGAAACCTCCAAAAGTTGTTCATTTCATAAAGAGTGAG  400

seq1  TGAGGCTGAAACATCCTAACTGAAACCACATTCATATATTAGGCACAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTGAAACATCCTAACTGAAACCACATTCATATATTAGGCACAGAA  450

seq1  TAATATAAAATTTCATTTAAGTGTCTTTCTGCATGCCTATATTGTTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAAATTTCATTTAAGTGTCTTTCTGCATGCCTATATTGTTTATC  500

seq1  AAAAGAATGATTCTTTCAAAAGTGAAGAAATTGAATGAACACACATATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATGATTCTTTCAAAAGTGAAGAAATTGAATGAACACACATATTG  550

seq1  TTAATGGATAATGTTTAATATAATTTATACTATAATTCAATTATATTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGATAATGTTTAATATAATTTATACTATAATTCAATTATATTGAT  600

seq1  CATTAATACCTATTTTTATCTTTTCATAGATAATAAGATCAAAATCATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATACCTATTTTTATCTTTTCATAGATAATAAGATCAAAATCATAA  650

seq1  GAATTC  656
      ||||||
seq2  GAATTC  656

seq1: chr1_149954048_149955211
seq2: B6Ng01-010D05.g_65_1225

seq1  GAATTCTCTCACATCCCTGGTGTCTGAGACTCTCTAGATACCCCACTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCACATCCCTGGTGTCTGAGACTCTCTAGATACCCCACTTCA  50

seq1  CACATACACATACACTGCTACTTATTCCTATTCATTCTCTTGGCCCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACACATACACTGCTACTTATTCCTATTCATTCTCTTGGCCCTCTG  100

seq1  GGGTTTCTCTCCTGACTCCCACCATACTTGATCCTGCCCCCCTTTTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTCTCCTGACTCCCACCATACTTGATCCTGCCCCCCTTTTCTGT  150

seq1  AAACTCACATAATTGTGCAAGTGATACTAAATTCAATTTTTATAATTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACATAATTGTGCAAGTGATACTAAATTCAATTTTTATAATTTTG  200

seq1  TATTATGGAAACTGAGATATTTGATTTTAGCAGAAGAAACAACATGTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGGAAACTGAGATATTTGATTTTAGCAGAAGAAACAACATGTTAA  250

seq1  ATCCTTATGAAAAGATTTAAAATCAATTTTGTGGGATGAATAATGATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTATGAAAAGATTTAAAATCAATTTTGTGGGATGAATAATGATCAA  300

seq1  ACATATCAGGGATAATGTTAAGAACTCATAAAATTATATTATAAAGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCAGGGATAATGTTAAGAACTCATAAAATTATATTATAAAGAATG  350

seq1  ACTATTTTAGCCATAAAAATGTTCTAAAGATTAACTCTAGGAGTATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTAGCCATAAAAATGTTCTAAAGATTAACTCTAGGAGTATATAT  400

seq1  ATTCTCTATAGGACTATATCATTTTGCTAAATTCCCAGCCCAGGAACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTATAGGACTATATCATTTTGCTAAATTCCCAGCCCAGGAACAAG  450

seq1  ATAGTGTTCAAGGTTTGTTTAAATTATAGTTCTTGAAAACTATCCATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTTCAAGGTTTGTTTAAATTATAGTTCTTGAAAACTATCCATATT  500

seq1  TGGACACTAAATAAAAGCAATACTGTCCTCATAAGATAAATGCCAGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACTAAATAAAAGCAATACTGTCCTCATAAGATAAATGCCAGGAAA  550

seq1  AAAATGTTCATATAGTAAAAACAGAATTCTATTGGTCTCATAGACAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTCATATAGTAAAAACAGAATTCTATTGGTCTCATAGACAGAAG  600

seq1  TTGGAGCTATGCACACACTAGTCAAAGAATAAAGATAGTTACTAGATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTATGCACACACTAGTCAAAGAATAAAGATAGTTACTAGATTAT  650

seq1  GGGATATTTAGGAAATAGATTTGCCCCTGGATCATATTAATAACAGTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATATTTAGGAAATAGATTTGCCCCTGGATCATATTAATAACAGTTGG  700

seq1  ATTTCTTATGTGGTTACTCAGAAAAGTTGGGTGACTAGAAAATTTTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTATGTGGTTACTCAGAAAAGTTGGGTGACTAGAAAATTTTCATA  750

seq1  ACATTAACTAGCAAGTCACAGTGTTAATTAATATTGCTCTACTTACTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAACTAGCAAGTCACAGTGTTAATTAATATTGCTCTACTTACTAGA  800

seq1  TAACATCAGT-AAGGTAGGCACATATTGACAGAAAGGGAAATCGGATACA  849
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAACATCAGTAAAGGTAGGCACATATTGACAGAAAGGGAAATCGGATACA  850

seq1  GAGCTATACAGTGAATTCTTAACAGGCAAACATTTAATGTCTAGGAAGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATACAGTGAATTCTTAACAGGCAAACATTTAATGTCTAGGAAGTA  900

seq1  CTCAAAGAAATGTTCAATATCCTTAGTCACCAGTGAAATACTAATCATAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGAAATGTTCAATATCCTTAGTCACCAGTGAAATACTAATCATAA  950

seq1  TGATTCTGAGATTCCATCTTATACCTGTCAAATGGCTAAGATCAAAGACT  999
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGATTCTGAGATTCCATCTTATACCTGTCAAATGGCTAAGATC-AAGACT  999

seq1  CAAGCAACAGCACATGCTGGCCAGGATGT-GGAGCATGGGGAATA-TTCA  1047
      ||||| ||||||||||||||||||||||| ||||||||||||||| ||||
seq2  CAAGC-ACAGCACATGCTGGCCAGGATGTGGGAGCATGGGGAATATTTCA  1048

seq1  -TTCATTACTGGTAGGAGTGAAAACTTGTACAAC-TACTGTGGAAATCTA  1095
       ||||||||||||||||||| ||||||||||||| |||||||||||||||
seq2  TTTCATTACTGGTAGGAGTG-AAACTTGTACAACTTACTGTGGAAATCTA  1097

seq1  TTTGGGGATTTCTCAGAAAATTGGGACTCTTTC-TACCTCAAGACCCAGC  1144
       ||||||| |||||| |||||| ||| |||||| |||||||  |  ||||
seq2  ATTGGGGA-TTCTCA-AAAATT-GGAATCTTTCTTACCTCAGAA--CAGC  1142

seq1  -TATACCACTCCTTGACATAT  1164
       |||||  |||||||||||||
seq2  ATATAC--CTCCTTGACATAT  1161