BAC Information

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BAC

Clone NameB6Ng01-010I18
Chromosome1 (Build37)
Map Location 181,772,412 - 181,890,308
singlet/doubletdoublet
Overlap geneLOC100042190
Upstream geneKif26b, Smyd3, LOC666354, LOC433941, Tfb2m, LOC100040874, 9630058J23Rik, Sccpdh, Gm1305, Ahctf1, LOC100040914
Downstream geneCdc42bpa, Cabc1, Psen2, EG277333, Itpkb, 6330403A02Rik, Gm821, Parp1, Lin9, Mixl1, LOC666431, Acbd3, H3f3a, BC031781, Lefty2, Pycr2, Lefty1, Tmem63a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010I18.bB6Ng01-010I18.g
ACCDH846187DH846188
length488291
definitionDH846187|Mus musculus domesticus DNA, BAC clone: B6Ng01-010I18, 5' end.DH846188|Mus musculus domesticus DNA, BAC clone: B6Ng01-010I18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(181,889,821 - 181,890,308)(181,772,412 - 181,772,702)
sequence
gaattcagaggacgcgggcggcagccgcggttcgggcggcgactcgagtc
ccttcttcccagccttgggctgagggcatctttcccgacggacgcaggcg
gctgaggcgcgggaggagggggcgctgccgccgctgaggagacctgaggc
tgccgcagcccggctcccaaccactcccttcctcctctgcccgcctcccc
cgcccgccctcccgcccgcgccgctcgcgcccgcgccgcccgcgcccgcg
ccctaggctccccgaggccgctcccggcgccgcggcgcgcaggcggaggc
tcgcggaccgtccggatccaaaatggcggcgcgccccgccccccgacccc
gctggaagcggcgcgctgcggcccagccgagcccgagccccgggggaggg
ggatcgcctcggcccgcggcgctgcggctgccgcagccagggaagcgggg
tcccccggggcgactcgggtgtggaacgggttggctcg
tgataatagagaagctaaagaatgagattaactgtaggtagagggaagct
aggtatggggtgcatgcttgcaatcccagctagccaagacggggatggtg
aggcttgccagtttgaggatagcctgggctacaaaatgagttagttggaa
gccatcctggactgtataacaacagagggatattcaagaattttgctaga
cattcctttctttctcttctctttttagactcaggcagttagaggtacca
ttggaaccagttatagttgtttgggggtgagtgaggaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_181889821_181890308
seq2: B6Ng01-010I18.b_38_525 (reverse)

seq1  CGAGCCAACCCGTTCCACACCCGAGTCGCCCCGGGGGACCCCGCTTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCAACCCGTTCCACACCCGAGTCGCCCCGGGGGACCCCGCTTCCCT  50

seq1  GGCTGCGGCAGCCGCAGCGCCGCGGGCCGAGGCGATCCCCCTCCCCCGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCGGCAGCCGCAGCGCCGCGGGCCGAGGCGATCCCCCTCCCCCGGG  100

seq1  GCTCGGGCTCGGCTGGGCCGCAGCGCGCCGCTTCCAGCGGGGTCGGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGGGCTCGGCTGGGCCGCAGCGCGCCGCTTCCAGCGGGGTCGGGGGG  150

seq1  CGGGGCGCGCCGCCATTTTGGATCCGGACGGTCCGCGAGCCTCCGCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCGCGCCGCCATTTTGGATCCGGACGGTCCGCGAGCCTCCGCCTGC  200

seq1  GCGCCGCGGCGCCGGGAGCGGCCTCGGGGAGCCTAGGGCGCGGGCGCGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCGCGGCGCCGGGAGCGGCCTCGGGGAGCCTAGGGCGCGGGCGCGGG  250

seq1  CGGCGCGGGCGCGAGCGGCGCGGGCGGGAGGGCGGGCGGGGGAGGCGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCGCGGGCGCGAGCGGCGCGGGCGGGAGGGCGGGCGGGGGAGGCGGGC  300

seq1  AGAGGAGGAAGGGAGTGGTTGGGAGCCGGGCTGCGGCAGCCTCAGGTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGAAGGGAGTGGTTGGGAGCCGGGCTGCGGCAGCCTCAGGTCTC  350

seq1  CTCAGCGGCGGCAGCGCCCCCTCCTCCCGCGCCTCAGCCGCCTGCGTCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCGGCGGCAGCGCCCCCTCCTCCCGCGCCTCAGCCGCCTGCGTCCG  400

seq1  TCGGGAAAGATGCCCTCAGCCCAAGGCTGGGAAGAAGGGACTCGAGTCGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGAAAGATGCCCTCAGCCCAAGGCTGGGAAGAAGGGACTCGAGTCGC  450

seq1  CGCCCGAACCGCGGCTGCCGCCCGCGTCCTCTGAATTC  488
      ||||||||||||||||||||||||||||||||||||||
seq2  CGCCCGAACCGCGGCTGCCGCCCGCGTCCTCTGAATTC  488

seq1: chr1_181772412_181772702
seq2: B6Ng01-010I18.g_70_360

seq1  TGATAATAGAGAAGCTAAAGAATGAGATTAACTGTAGGTAGAGGGAAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATAGAGAAGCTAAAGAATGAGATTAACTGTAGGTAGAGGGAAGCT  50

seq1  AGGTATGGGGTGCATGCTTGCAATCCCAGCTAGCCAAGACGGGGATGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGGGGTGCATGCTTGCAATCCCAGCTAGCCAAGACGGGGATGGTG  100

seq1  AGGCTTGCCAGTTTGAGGATAGCCTGGGCTACAAAATGAGTTAGTTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGCCAGTTTGAGGATAGCCTGGGCTACAAAATGAGTTAGTTGGAA  150

seq1  GCCATCCTGGACTGTATAACAACAGAGGGATATTCAAGAATTTTGCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCTGGACTGTATAACAACAGAGGGATATTCAAGAATTTTGCTAGA  200

seq1  CATTCCTTTCTTTCTCTTCTCTTTTTAGACTCAGGCAGTTAGAGGTACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTTCTTTCTCTTCTCTTTTTAGACTCAGGCAGTTAGAGGTACCA  250

seq1  TTGGAACCAGTTATAGTTGTTTGGGGGTGAGTGAGGAAGGG  291
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACCAGTTATAGTTGTTTGGGGGTGAGTGAGGAAGGG  291