BAC Information

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BAC

Clone NameB6Ng01-010L09
Chromosome1 (Build37)
Map Location 85,183,320 - 85,184,356
singlet/doubletsinglet
Overlap geneLOC100040158, LOC621835
Upstream gene5033414K04Rik, LOC100039638, Dner, Trip12, Fbxo36, Slc16a14, LOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742
Downstream geneEG665378, C130026I21Rik, LOC100040135, LOC639868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010L09.bB6Ng01-010L09.g
ACCDH846300DH846301
length1,0361,161
definitionDH846300|Mus musculus domesticus DNA, BAC clone: B6Ng01-010L09, 5' end.DH846301|Mus musculus domesticus DNA, BAC clone: B6Ng01-010L09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctactgttgcctcttaacattgcagccagcatggcatccctttga
ggtttgaatacagaggagggaggccagcaagaggaagagatatggccttg
ggagccttggttttatttgattttcagggggagctatagaaggtgatgga
tttttctctctggggttacttggactctaggattctgagccttatgggtc
cttgactatgattggcacatcttcagcctcattctcatggcagctactct
gtagcgaggggggctgttggccatggtggacacatcctgggatggcaaag
agaaagaaaatagcctagagccttgaatgttcgaggctaagtagaattat
tcatttagaaaccagaccctgcttccttgcatggcttcacaaaggctcct
tggggactatagccagcaaggggaccttgctttaattcaaacaatagttt
gatgatcctctttttctcctagtagatgcacaggtccataaaaatatata
tggggagtagctactttaagagaaacactttaggtagaatgaattaaact
attattttcaatcaatgagttcaagagtgaatacactctgttaacagttc
ctgggaaccccctgaaggtgcacgaggccacaacttctacaaatttgggt
caaagtaagattgagaaacatgtgtgactggtcaggatggaaaatcccta
gtgagagattagggagaggctttatgtgactacagtgtctcttttgatct
tgtttgctttatcctctaatttgtttagatgggactaaacaagctcaaca
cttgagctgttccctacctaagagcctctaaataattaagcaaattttat
aggcaagatgacgcaaggctgtatctcagcacatgggaatgcagaagcag
aaggatcaggagttcaagttcagctctggctatatagggagtccaaggct
agcctgggctaaagtgagacatatcttagaagtaagattaatgcttggtg
atgataaaacaattaagcaactggtcattgactgtt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagttcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctctttagatttgggaa
ccaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgtcggggcctagcaaac
acaaaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggagagctagagaagtagccaaggagctaagggatctgcaccctatag
atggaacacatatgactacagtacccggactcttgactctagctacatat
atatcaaaagatgctagtcggcatcactggaaaggagaggccaatgactt
gcaactttattgctcagtacaggtaactcaggcaaaaggggattggttgc
acggaatgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_85183320_85184356
seq2: B6Ng01-010L09.b_48_1083

seq1  GAATTCTACTGTTGCCTCTTAACATTGCAGCCAGCATGGCATCCCTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTGTTGCCTCTTAACATTGCAGCCAGCATGGCATCCCTTTGA  50

seq1  GGTTTGAATACAGAGGAGGGAGGCCAGCAAGAGGAAGAGATATGGCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGAATACAGAGGAGGGAGGCCAGCAAGAGGAAGAGATATGGCCTTG  100

seq1  GGAGCCTTGGTTTTATTTGATTTTCAGGGGGAGCTATAGAAGGTGATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTTGGTTTTATTTGATTTTCAGGGGGAGCTATAGAAGGTGATGGA  150

seq1  TTTTTCTCTCTGGGGTTACTTGGACTCTAGGATTCTGAGCCTTATGGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCTCTGGGGTTACTTGGACTCTAGGATTCTGAGCCTTATGGGTC  200

seq1  CTTGACTATGATTGGCACATCTTCAGCCTCATTCTCATGGCAGCTACTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTATGATTGGCACATCTTCAGCCTCATTCTCATGGCAGCTACTCT  250

seq1  GTAGCGAGGGGGGCTGTTGGCCATGGTGGACACATCCTGGGATGGCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCGAGGGGGGCTGTTGGCCATGGTGGACACATCCTGGGATGGCAAAG  300

seq1  AGAAAGAAAATAGCCTAGAGCCTTGAATGTTCGAGGCTAAGTAGAATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAATAGCCTAGAGCCTTGAATGTTCGAGGCTAAGTAGAATTAT  350

seq1  TCATTTAGAAACCAGACCCTGCTTCCTTGCATGGCTTCACAAAGGCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAGAAACCAGACCCTGCTTCCTTGCATGGCTTCACAAAGGCTCCT  400

seq1  TGGGGACTATAGCCAGCAAGGGGACCTTGCTTTAATTCAAACAATAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACTATAGCCAGCAAGGGGACCTTGCTTTAATTCAAACAATAGTTT  450

seq1  GATGATCCTCTTTTTCTCCTAGTAGATGCACAGGTCCATAAAAATATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCCTCTTTTTCTCCTAGTAGATGCACAGGTCCATAAAAATATATA  500

seq1  TGGGGAGTAGCTACTTTAAGAGAAACACTTTAGGTAGAATGAATTAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGTAGCTACTTTAAGAGAAACACTTTAGGTAGAATGAATTAAACT  550

seq1  ATTATTTTCAATCAATGAGTTCAAGAGTGAATACACTCTGTTAACAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTCAATCAATGAGTTCAAGAGTGAATACACTCTGTTAACAGTTC  600

seq1  CTGGGAACCCCCTGAAGGTGCACGAGGCCACAACTTCTACAAATTTGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAACCCCCTGAAGGTGCACGAGGCCACAACTTCTACAAATTTGGGT  650

seq1  CAAAGTAAGATTGAGAAACATGTGTGACTGGTCAGGATGGAAAATCCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAAGATTGAGAAACATGTGTGACTGGTCAGGATGGAAAATCCCTA  700

seq1  GTGAGAGATTAGGGAGAGGCTTTATGTGACTACAGTGTCTCTTTTGATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGATTAGGGAGAGGCTTTATGTGACTACAGTGTCTCTTTTGATCT  750

seq1  TGTTTGCTTTATCCTCTAATTTGTTTAGATGGGAACTAAACAAGCTCAAC  800
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGTTTGCTTTATCCTCTAATTTGTTTAGATGGG-ACTAAACAAGCTCAAC  799

seq1  ACTTGAGCTGTT-CCTACCTAAGAGCCTCTAAATAATTAAGCAAATTTTA  849
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGCTGTTCCCTACCTAAGAGCCTCTAAATAATTAAGCAAATTTTA  849

seq1  TAGGCAAGATGACGCAAGGCTGGAATCTCAGCACAT-GGAATGCAGAAGC  898
      ||||||||||||||||||||| | |||||||||||| |||||||||||||
seq2  TAGGCAAGATGACGCAAGGCT-GTATCTCAGCACATGGGAATGCAGAAGC  898

seq1  AGAAGGATCAGGAGTTCAAGTTCAGCCTTGGCTATATAGGGAGTCCAAGG  948
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  AGAAGGATCAGGAGTTCAAGTTCAGCTCTGGCTATATAGGGAGTCCAAGG  948

seq1  CTAGCCTGGGCTAAAGTGAGACATATCTTAGAAGTAAGATTAATGC-TGG  997
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTAGCCTGGGCTAAAGTGAGACATATCTTAGAAGTAAGATTAATGCTTGG  998

seq1  TGATGATAAAACAAATTTAAGCAACT-GTCATTTGACTGTT  1037
      ||||||||||||||  |||||||||| |||| |||||||||
seq2  TGATGATAAAACAA--TTAAGCAACTGGTCA-TTGACTGTT  1036