BAC Information

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BAC

Clone NameB6Ng01-010M22
Chromosome1 (Build37)
Map Location 65,783,735 - 65,784,877
singlet/doubletsinglet
Overlap genenone
Upstream geneFzd5, 9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik, Idh1, Pip5k3, Pthr2, LOC100042716, EG628894, LOC100043165, LOC383520, EG667775
Downstream geneCrygf, LOC667781, EG667786, Mtap2, C030018G13Rik, Rpe, 1110028C15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010M22.bB6Ng01-010M22.g
ACCDH846370DH846371
length1,133710
definitionDH846370|Mus musculus domesticus DNA, BAC clone: B6Ng01-010M22, 5' end.DH846371|Mus musculus domesticus DNA, BAC clone: B6Ng01-010M22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatcacccatcaaatattggcaaaatgtctctagcctacttac
ctcgaagccaaaatctcttcattgacatatgaatgtatttgacaccactc
accactaatctgaaaatatctaaactagggtgaaacccattgatcaaaat
gacgatgattctttattagcaggctagtgtttgaatcctcacaaaaccaa
gttatttctggacaaacttgttaaatttaatttttatatttttattattt
ttaatgattcagttgttggcaacatgattacatttttaaaaggagaacat
tgaattagtatttaatttttaggcacaccaaataatataaaataattatt
aattagtgctttaagatttccaaatctagacctttataatcaagcatacg
taggtttcacaaatagagaataatttatcatttggtaaattgcatatact
aaaatggatattcttccttttgagaatgaattaattttacatcaattttc
attttgtatttcaagggagtgtctgtgctctgggaagggaagccagtgat
gaaagtagatgtttgaacatatccctgataagtcatgctgttagttgaga
tgccatagcagctgacagtgtctctgatagaaatatttctgccatgaccc
actttaggctggcaatatttcagcaaccaacttaaagatttaaagttatt
aaaactttagcaataggaaggatgagttaatgctagcatatcatagttac
ttctgatgccctgaagaattatcagaggatcagaattatagatgcaatag
aggaatgtttgtcacaaaagaaaacaaatgtattagatgtgatttgaaat
gatggaagaatgctcattaattcatgaattatttaacttcttttagaccc
aacggtagacatttagagcaacgtgaaaaactaattgaaaccactcagag
cttagaagcttcattgatttaatgtcagtacaaagtcaacttaggaagaa
agactcttggcttggtgtagtgggggcatgcctttaccccagcacttggg
aggcagaaggcagcaatttctgagttcgagccagcctgatcttacgagtg
agttcaggagacgactacaaagaacctgtctca
gaattctcagtagaactcttgaatgacagagaagcacctaaagaaatgtt
caacattcttattcattagggaaataaacatcaaaatgactctgagattc
caccttacacttaccagaatggctaggatcaaaaactcaaaggaaagcac
aggctggcgaggaacactcctccactactggtgggagtataaacttgtac
aaccactgtggaaattaattcgtcagtcttttacaaaatggaaatattcc
tacctcaagatccagctatataactcctgggcatatgcccaaaagatacc
ccactataccacagagagtcttgctcacttaagttcatagcagctttatt
tgtattagccagaaactggaaacagcatagatgttcctcaactgaagatg
aataaagaaaatgtaaacaatggagtactagttagccatgaaaaacaaaa
atattgtgaattttgcaggcaaatggatggactggaaaatattatcctga
gggaggtaacacagaccgaaaagtacttgtatgccatgtactcactgata
ggtggatattagcgataatgtccattataaccatgctataatcaaagaag
ctaaataacaaggaggtcttaaaggaggatggttgaatctttctcagaag
gggacacaaaatagatatcataggttggtggaaggagagaaatgggtaga
agatgggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_65783735_65784877
seq2: B6Ng01-010M22.b_46_1178 (reverse)

seq1  TGAGACAGGGTTTCTCTCTGTAGTTCTGTCTGTCCTGGAACTCACTCTGT  50
      |||||||||     ||| ||||||   |||  |||| ||||||||||   
seq2  TGAGACAGG----TTCTTTGTAGT--CGTC--TCCT-GAACTCACTCGTA  41

seq1  AGATCAGGCTGGCCTCGAACTCAGAAATTGCCTGCC-TCTGCCTCCCAAG  99
      |||||||||||| ||||||||||||||||| ||||| |||||||||||||
seq2  AGATCAGGCTGG-CTCGAACTCAGAAATTG-CTGCCTTCTGCCTCCCAAG  89

seq1  TGCTGGGGTTAAAGGCATG-CACCACTACACC-AGGCAAGAGTCTTTCTT  147
      |||||||| |||||||||| | |||||||||| || ||||||||||||||
seq2  TGCTGGGG-TAAAGGCATGCCCCCACTACACCAAGCCAAGAGTCTTTCTT  138

seq1  CTTAGGTTGACTTTGTACTGACATTAAATCAATGGAGCTTCTAAGCTCTG  197
      | || ||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCTAAGTTGACTTTGTACTGACATTAAATCAATGAAGCTTCTAAGCTCTG  188

seq1  AGTGGTTTCAATTAGTTTTTCACGTTGCTCTAAATGTCTACCGTTGGGTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTTCAATTAGTTTTTCACGTTGCTCTAAATGTCTACCGTTGGGTC  238

seq1  TAAAAGAAGTTAAATAATTCATGAATTAATGAGCATTCTTCCATCATTTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAGTTAAATAATTCATGAATTAATGAGCATTCTTCCATCATTTC  288

seq1  AAATCACATCCTAATACATTTGTTTTCTTTTGTGACAAACATTCCTCTAT  347
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACAT-CTAATACATTTGTTTTCTTTTGTGACAAACATTCCTCTAT  337

seq1  TGCATCTATAATTCTGATCCTCTGATAATTCTTCAGGGCATCAGAAGTAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTATAATTCTGATCCTCTGATAATTCTTCAGGGCATCAGAAGTAA  387

seq1  CTATGATATGCTAGCATTAACTCATCCTTCCTATTGCTAAAGTTTTAATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATATGCTAGCATTAACTCATCCTTCCTATTGCTAAAGTTTTAATA  437

seq1  ACTTTAAATCTTTAAGTTGGTTGCTGAAATATTGCCAGCCTAAAGTGGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAATCTTTAAGTTGGTTGCTGAAATATTGCCAGCCTAAAGTGGGT  487

seq1  CATGGCAGAAATATTTCTATCAGAGACACTGTCAGCTGCTATGGCATCTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAGAAATATTTCTATCAGAGACACTGTCAGCTGCTATGGCATCTC  537

seq1  AACTAACAGCATGACTTATCAGGGATATGTTCAAACATCTACTTTCATCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACAGCATGACTTATCAGGGATATGTTCAAACATCTACTTTCATCA  587

seq1  CTGGCTTCCCTTCCCAGAGCACAGACACTCCCTTGAAATACAAAATGAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCCCTTCCCAGAGCACAGACACTCCCTTGAAATACAAAATGAAA  637

seq1  ATTGATGTAAAATTAATTCATTCTCAAAAGGAAGAATATCCATTTTAGTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGTAAAATTAATTCATTCTCAAAAGGAAGAATATCCATTTTAGTA  687

seq1  TATGCAATTTACCAAATGATAAATTATTCTCTATTTGTGAAACCTACGTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAATTTACCAAATGATAAATTATTCTCTATTTGTGAAACCTACGTA  737

seq1  TGCTTGATTATAAAGGTCTAGATTTGGAAATCTTAAAGCACTAATTAATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGATTATAAAGGTCTAGATTTGGAAATCTTAAAGCACTAATTAATA  787

seq1  ATTATTTTATATTATTTGGTGTGCCTAAAAATTAAATACTAATTCAATGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTATATTATTTGGTGTGCCTAAAAATTAAATACTAATTCAATGT  837

seq1  TCTCCTTTTAAAAATGTAATCATGTTGCCAACAACTGAATCATTAAAAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTTAAAAATGTAATCATGTTGCCAACAACTGAATCATTAAAAAT  887

seq1  AATAAAAATATAAAAATTAAATTTAACAAGTTTGTCCAGAAATAACTTGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAATATAAAAATTAAATTTAACAAGTTTGTCCAGAAATAACTTGG  937

seq1  TTTTGTGAGGATTCAAACACTAGCCTGCTAATAAAGAATCATCGTCATTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGAGGATTCAAACACTAGCCTGCTAATAAAGAATCATCGTCATTT  987

seq1  TGATCAATGGGTTTCACCCTAGTTTAGATATTTTCAGATTAGTGGTGAGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAATGGGTTTCACCCTAGTTTAGATATTTTCAGATTAGTGGTGAGT  1037

seq1  GGTGTCAAATACATTCATATGTCAATGAAGAGATTTTGGCTTCGAGGTAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCAAATACATTCATATGTCAATGAAGAGATTTTGGCTTCGAGGTAA  1087

seq1  GTAGGCTAGAGACATTTTGCCAATATTTGATGGGTGATAAGAATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCTAGAGACATTTTGCCAATATTTGATGGGTGATAAGAATTC  1133