BAC Information

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BAC

Clone NameB6Ng01-011A18
Chromosome1 (Build37)
Map Location 176,760,448 - 176,846,910
singlet/doubletdoublet
Overlap geneGrem2
Upstream geneLOC100040462, Mnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2
Downstream geneRgs7, Fh1, Kmo, Opn3, Chml, Wdr64, Exo1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011A18.bB6Ng01-011A18.g
ACCDH846540DH846541
length619795
definitionDH846540|Mus musculus domesticus DNA, BAC clone: B6Ng01-011A18, 5' end.DH846541|Mus musculus domesticus DNA, BAC clone: B6Ng01-011A18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(176,846,292 - 176,846,910)(176,760,448 - 176,761,242)
sequence
gaattctggctggtataataaccctaataaaaagacacatttgggcaaag
agttcattaaaaggctgtttatgattttttttttgcaagggaatcaaaaa
gagaggaaatgcatagctttaggaaagttctctagaagggaaggtcttga
agaatgtgacaccaacaacacaaatgttctcgaatgtgactttcatggta
tgggctagtacaggttctcagcataccgttctcctctcttgttgtatatt
cagtgtctcagcaagtgggagagaagacacagggcaggggaccacctgac
gctctcatgtgaaattctagcccgacattgtctaggtgagatattgtgtg
ccttaaaaatataattcaacctggctctgtaaccatgacttaaggctgaa
aggaagccagcctattcatccgtgaacctgtatttgcctctaacctcttt
tatgcaattataccatgaatgttgtcatattttctaattactttagttgc
attggagaaaagccgataaatgtgtagaactaagtaggtgtaaaaatgtg
actttatatgccccagtacaggggaatgccagggccaaaaagggggagtg
ggtgggggtatggggactt
gaattcactgatgaagaatatctggaggtaacatttactggtcctgcaag
aacatagctgatacttaaaaaaaaaaaaaggaacacaggtgttgacaggt
tgttgctgttgttgttgttgttttctgttattcctttgattctttggatt
tggtccagtgtgaagaataaatcagtattgaaggactttataattaatat
tggtaaaattgcatttccaatattaagcacattcatctggtccattatgt
ttaaccaggagaaaatacactgaaggtcatttaccttggtccatatcagt
agagcaaccctgtcagatctcctgcccatggaagattaagaatatccttt
taaacttgtgaaatgatgaagtagataaggctttgctaccaagcctgatg
atgtaagtcatctccagagccccaggggtgaaaggagagaaccaactccc
acaagttttcttctgacctacacttttgagccagggtagacacatcccca
tgccctcacacacacagaaagttgacttaagaagaagaaaagacagcagg
gcccccagtggaggagctagggaaagtacccaaggagctgaaagggtctg
caactctataggtggaacaacaatatgaactaaccagtaccccccagagc
tcgtgtctctagctgcacatgtagcagaagatggccttgtcggccatcat
tgggaagacaggccccttggtcttgcaaactttatatgcctcagtacagg
ggaacgccaggggccaagaagtgggagtgggtgggtagaggagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_176846292_176846910
seq2: B6Ng01-011A18.b_32_650 (reverse)

seq1  AAGTCCCCATACCCCCACCCACTCCCCCTTTTTGGCCCTGGCATTCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCCATACCCCCACCCACTCCCCCTTTTTGGCCCTGGCATTCCCCT  50

seq1  GTACTGGGGCATATAAAGTCACATTTTTACACCTACTTAGTTCTACACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGGGCATATAAAGTCACATTTTTACACCTACTTAGTTCTACACAT  100

seq1  TTATCGGCTTTTCTCCAATGCAACTAAAGTAATTAGAAAATATGACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCGGCTTTTCTCCAATGCAACTAAAGTAATTAGAAAATATGACAACA  150

seq1  TTCATGGTATAATTGCATAAAAGAGGTTAGAGGCAAATACAGGTTCACGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGTATAATTGCATAAAAGAGGTTAGAGGCAAATACAGGTTCACGG  200

seq1  ATGAATAGGCTGGCTTCCTTTCAGCCTTAAGTCATGGTTACAGAGCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAGGCTGGCTTCCTTTCAGCCTTAAGTCATGGTTACAGAGCCAGG  250

seq1  TTGAATTATATTTTTAAGGCACACAATATCTCACCTAGACAATGTCGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTATATTTTTAAGGCACACAATATCTCACCTAGACAATGTCGGGC  300

seq1  TAGAATTTCACATGAGAGCGTCAGGTGGTCCCCTGCCCTGTGTCTTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTTCACATGAGAGCGTCAGGTGGTCCCCTGCCCTGTGTCTTCTCT  350

seq1  CCCACTTGCTGAGACACTGAATATACAACAAGAGAGGAGAACGGTATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTGCTGAGACACTGAATATACAACAAGAGAGGAGAACGGTATGCT  400

seq1  GAGAACCTGTACTAGCCCATACCATGAAAGTCACATTCGAGAACATTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCTGTACTAGCCCATACCATGAAAGTCACATTCGAGAACATTTGT  450

seq1  GTTGTTGGTGTCACATTCTTCAAGACCTTCCCTTCTAGAGAACTTTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGGTGTCACATTCTTCAAGACCTTCCCTTCTAGAGAACTTTCCTA  500

seq1  AAGCTATGCATTTCCTCTCTTTTTGATTCCCTTGCAAAAAAAAAATCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATGCATTTCCTCTCTTTTTGATTCCCTTGCAAAAAAAAAATCATA  550

seq1  AACAGCCTTTTAATGAACTCTTTGCCCAAATGTGTCTTTTTATTAGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCTTTTAATGAACTCTTTGCCCAAATGTGTCTTTTTATTAGGGTT  600

seq1  ATTATACCAGCCAGAATTC  619
      |||||||||||||||||||
seq2  ATTATACCAGCCAGAATTC  619

seq1: chr1_176760448_176761242
seq2: B6Ng01-011A18.g_63_857

seq1  GAATTCACTGATGAAGAATATCTGGAGGTAACATTTACTGGTCCTGCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGATGAAGAATATCTGGAGGTAACATTTACTGGTCCTGCAAG  50

seq1  AACATAGCTGATACTTAAAAAAAAAAAAAGGAACACAGGTGTTGACAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGCTGATACTTAAAAAAAAAAAAAGGAACACAGGTGTTGACAGGT  100

seq1  TGTTGCTGTTGTTGTTGTTGTTTTCTGTTATTCCTTTGATTCTTTGGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGTTGTTGTTGTTGTTTTCTGTTATTCCTTTGATTCTTTGGATT  150

seq1  TGGTCCAGTGTGAAGAATAAATCAGTATTGAAGGACTTTATAATTAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCAGTGTGAAGAATAAATCAGTATTGAAGGACTTTATAATTAATAT  200

seq1  TGGTAAAATTGCATTTCCAATATTAAGCACATTCATCTGGTCCATTATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAATTGCATTTCCAATATTAAGCACATTCATCTGGTCCATTATGT  250

seq1  TTAACCAGGAGAAAATACACTGAAGGTCATTTACCTTGGTCCATATCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAGGAGAAAATACACTGAAGGTCATTTACCTTGGTCCATATCAGT  300

seq1  AGAGCAACCCTGTCAGATCTCCTGCCCATGGAAGATTAAGAATATCCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAACCCTGTCAGATCTCCTGCCCATGGAAGATTAAGAATATCCTTT  350

seq1  TAAACTTGTGAAATGATGAAGTAGATAAGGCTTTGCTACCAAGCCTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTGTGAAATGATGAAGTAGATAAGGCTTTGCTACCAAGCCTGATG  400

seq1  ATGTAAGTCATCTCCAGAGCCCCAGGGGTGAAAGGAGAGAACCAACTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGTCATCTCCAGAGCCCCAGGGGTGAAAGGAGAGAACCAACTCCC  450

seq1  ACAAGTTTTCTTCTGACCTACACTTTTGAGCCAGGGTAGACACATCCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTTTCTTCTGACCTACACTTTTGAGCCAGGGTAGACACATCCCCA  500

seq1  TGCCCTCACACACACAGAAAGTTGACTTAAGAAGAAGAAAAGACAGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCACACACACAGAAAGTTGACTTAAGAAGAAGAAAAGACAGCAGG  550

seq1  GCCCCCAGTGGAGGAGCTAGGGAAAGTACCCAAGGAGCTGAAAGGGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCAGTGGAGGAGCTAGGGAAAGTACCCAAGGAGCTGAAAGGGTCTG  600

seq1  CAACTCTATAGGTGGAACAACAATATGAACTAACCAGTACCCCCCAGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTATAGGTGGAACAACAATATGAACTAACCAGTACCCCCCAGAGC  650

seq1  TCGTGTCTCTAGCTGCACATGTAGCAGAAGATGGCCTTGTCGGCCATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTCTCTAGCTGCACATGTAGCAGAAGATGGCCTTGTCGGCCATCAT  700

seq1  TGGGAAGACAGGCCCCTTGGTCTTGCAAACTTTATATGCCTCAGTACAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGACAGGCCCCTTGGTCTTGCAAACTTTATATGCCTCAGTACAGG  750

seq1  GGAACGCCAGGGGCCAAGAAGTGGGAGTGGGTGGGTAGAGGAGCA  795
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGCCAGGGGCCAAGAAGTGGGAGTGGGTGGGTAGAGGAGCA  795