BAC Information

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BAC

Clone NameB6Ng01-011G11
Chromosome1 (Build37)
Map Location 186,249,877 - 186,436,363
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666649, 1700056E22Rik, Dusp10
Downstream geneEG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1, Iars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011G11.bB6Ng01-011G11.g
ACCDH846799DH846800
length306156
definitionDH846799|Mus musculus domesticus DNA, BAC clone: B6Ng01-011G11, 5' end.DH846800|Mus musculus domesticus DNA, BAC clone: B6Ng01-011G11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(186,249,877 - 186,250,182)(186,436,208 - 186,436,363)
sequence
attcttagggtaagttaaaaaaagggggggggtgtaaaaaagaaagagac
caaaaatagtgaagatataggtaactttaatggctacaccacagtttgaa
attcaacttgtgtgtctgtcagatcaccctcaactaagtgtgatggtata
cacctgtaattccagcaacagggaggcggaggcaggaggattgcaaattc
aatttgagctgggccacacagcaagctctatctcaaaacagccagagtag
gggaagagagaaaaggagggagagaagaagaagggagagagggaaggagg
gaggga
acccccttttaaaaaagaaaagatatgtctacattgttagtctttgatta
tatacacgatctgtacatcttttctccagtctctggttttctttttcctt
atctttgctttaaagctttatgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_186249877_186250182
seq2: B6Ng01-011G11.b_51_356

seq1  ATTCTTAGGGTAAGTTAAAAAAAGGGGGGGGGTGTAAAAAAGAAAGAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAGGGTAAGTTAAAAAAAGGGGGGGGGTGTAAAAAAGAAAGAGAC  50

seq1  CAAAAATAGTGAAGATATAGGTAACTTTAATGGCTACACCACAGTTTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAGTGAAGATATAGGTAACTTTAATGGCTACACCACAGTTTGAA  100

seq1  ATTCAACTTGTGTGTCTGTCAGATCACCCTCAACTAAGTGTGATGGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACTTGTGTGTCTGTCAGATCACCCTCAACTAAGTGTGATGGTATA  150

seq1  CACCTGTAATTCCAGCAACAGGGAGGCGGAGGCAGGAGGATTGCAAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTAATTCCAGCAACAGGGAGGCGGAGGCAGGAGGATTGCAAATTC  200

seq1  AATTTGAGCTGGGCCACACAGCAAGCTCTATCTCAAAACAGCCAGAGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAGCTGGGCCACACAGCAAGCTCTATCTCAAAACAGCCAGAGTAG  250

seq1  GGGAAGAGAGAAAAGGAGGGAGAGAAGAAGAAGGGAGAGAGGGAAGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAGAGAAAAGGAGGGAGAGAAGAAGAAGGGAGAGAGGGAAGGAGG  300

seq1  GAGGGA  306
      ||||||
seq2  GAGGGA  306

seq1: chr1_186436208_186436363
seq2: B6Ng01-011G11.g_75_230 (reverse)

seq1  CACACACACACACACACACACACACACACACACACATAAAGCTTTAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACATAAAGCTTTAAAGC  50

seq1  AAAGATAAGGAAAAAGAAAACCAGAGACTGGAGAAAAGATGTACAGATCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAAGGAAAAAGAAAACCAGAGACTGGAGAAAAGATGTACAGATCG  100

seq1  TGTATATAATCAAAGACTAACAATGTAGACATATCTTTTCTTTTTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATAATCAAAGACTAACAATGTAGACATATCTTTTCTTTTTTAAAA  150

seq1  GGGGGT  156
      ||||||
seq2  GGGGGT  156