BAC Information

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BAC

Clone NameB6Ng01-014B02
Chromosome1 (Build37)
Map Location 81,435,858 - 81,436,306
singlet/doubletsinglet
Overlap genenone
Upstream gene1700016L21Rik, Dock10, LOC665092, 9430031J16Rik
Downstream geneEG621020, LOC433328, EG665145, Irs1, Rhbdd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014B02.b
ACCDH848717
length449
definitionDH848717|Mus musculus domesticus DNA, BAC clone: B6Ng01-014B02, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agaattcaacgttgatgcaagggcattattggcaaatggatattcactac
cacaaccatctgtcctacaaacattacctgtgaatgttaaacctattctt
taagaatttgttggatcatttactaaatagtaacaatgtgtaacaaatac
ttaccccattaaatcagagggaatatatgaaaattgcttggaaatctgga
gaatattttgatgccttgatctataatgtacagagtggtatatatcataa
cagttcaacaaaagtttttattactaatataatatataatataatttatt
tcttacttattttatatttgtagtgagatttatttacaacacttccagac
atgaagtgtccattccaatattttaacaagagtgttcagtcatatttata
catgcattaaatgctgttgttgttgaaattttaaaataatttttattat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81435858_81436306
seq2: B6Ng01-014B02.b_30_477

seq1  GAATTCAACGTTGATGCAAAGGGCATTATTGGCAAATGGATATTCACTAC  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAATTCAACGTTGATGC-AAGGGCATTATTGGCAAATGGATATTCACTAC  49

seq1  CACAACCATCTGTCCTACAAACATTACCTGTGAATGTTAAACCTATTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCATCTGTCCTACAAACATTACCTGTGAATGTTAAACCTATTCTT  99

seq1  TAAGAATTTGTTGGATCATTTACTAAATAGTAACAATGTGTAACAAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTTGTTGGATCATTTACTAAATAGTAACAATGTGTAACAAATAC  149

seq1  TTACCCCATTAAATCAGAGGGAAGATATGAAAATTGCTTGGAAATCTGGA  200
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTACCCCATTAAATCAGAGGGAATATATGAAAATTGCTTGGAAATCTGGA  199

seq1  GAATATTTTGATGCCTTGATCTATAATGTACAGAGTGGTATATATCATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTTGATGCCTTGATCTATAATGTACAGAGTGGTATATATCATAA  249

seq1  CAGTTCAACAAAAGTTTTTATTACTAATATAATATATAATATAATTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCAACAAAAGTTTTTATTACTAATATAATATATAATATAATTTATT  299

seq1  TCTTACTTATTTTATATTTGTAGTGAGATTTATATACAACACTTCCAGAC  350
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCTTACTTATTTTATATTTGTAGTGAGATTTATTTACAACACTTCCAGAC  349

seq1  ATGAAGTGTCCAGTCCAATATTTGAACAAGAGTGTTCAGTCATATTTATA  400
      |||||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  ATGAAGTGTCCATTCCAATATTTTAACAAGAGTGTTCAGTCATATTTATA  399

seq1  CAGGCATTAAATGCTGTTGTTGTTGAAATTTTAAAATAATTTTTATTAT  449
      || ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATTAAATGCTGTTGTTGTTGAAATTTTAAAATAATTTTTATTAT  448