BAC Information

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BAC

Clone NameB6Ng01-014C14
Chromosome1 (Build37)
Map Location 43,777,582 - 43,778,547
singlet/doubletsinglet
Overlap genenone
Upstream geneMrps9, Gpr45, LOC100041588, Tgfbrap1, AI597479, Fhl2, EG666642, EG666644, LOC100041644, Nck2
Downstream gene1500015O10Rik, Uxs1, LOC666676, LOC100042303, EG666690, Tpp2, A530098C11Rik, EG666713, 1700029F09Rik, Kdelc1, Bivm, Ercc5, 4832428D23Rik, LOC435619, Txn-ps1, Gulp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014C14.b
ACCDH848783
length965
definitionDH848783|Mus musculus domesticus DNA, BAC clone: B6Ng01-014C14, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtgtgacctcctgaatgacgcgcttgttggacgcttgtgata
gacattcctgtttcgattgagtctgcttgtaaccccgtttctgttcccga
agtctgtccttcgtgcttctgtccctatctaatgattttaaaaatcttta
tcgcccttgtttcaaacagcactaatcttgcctttgcaatctttaccatg
tcaattcttgataggctgtcatatagcttgtaaaacataattgtggggtt
ttggcttttgtgttgatcctcagcaaaaagtcagggtcctgacgacctga
acccatcacacgctggcatcgttgactctgggactgtgaataacacaaaa
atatagattggattgcttaaggtttatcttaaaagtataaacacatactg
aacattgggatctttagatgccactgctgaatgacaaagcttagaccctg
ggagtccctgtctataaacagggctctatcttatccaccctgtgagaacc
agaagttaaactggaaatcacagtgttgagtaaatgattagttttagatt
tcaggggcagccatgatgtctcgtgggttcctagatgactgtggatgcac
ttgatgcacttgatatgaatgatgttgccactgcccaccttccttgagca
gtggcgattatactaatgcatcaacaaacccatggaagcttcctatggct
tataggctcaccttcctcatctctgtcactcatcatcagccaagatgcaa
aatcattatcagaaaacttccagaaataaacaatgcatattaattgtaca
cttatctgatgaaatcttgagccatcctatcaaatccagaccagaacata
agtcatttctgtctatatacatatgatagccacatttgtcagtcatttgg
tagctgtctaggtgatacactgactaatgggacatcttgagcttatgagt
tttgggggagggggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_43777582_43778547
seq2: B6Ng01-014C14.b_44_1008

seq1  GAATTCCTGTGTCTTATCCTGAATGAGGTGCTTGTCAGAGGCTTGAGATT  50
      ||||||||||||    |||||||||| | ||||||  || ||||| ||| 
seq2  GAATTCCTGTGTGACCTCCTGAATGACGCGCTTGTTGGACGCTTGTGATA  50

seq1  GACAATCATGTTTCAGTTGACTCTGCTTAAAACCCTGTTTAAATTAATGA  100
      |||| || ||||||  |||| |||||||  ||||| ||||   ||   ||
seq2  GACATTCCTGTTTCGATTGAGTCTGCTTGTAACCCCGTTTCTGTTCCCGA  100

seq1  AGTCTCTCCAAGGTGCTTCACAAGCTATCTAATGATTTTAGAAATCTTTG  150
      ||||| |||   |||||||     |||||||||||||||| |||||||| 
seq2  AGTCTGTCCTTCGTGCTTCTGTCCCTATCTAATGATTTTAAAAATCTTTA  150

seq1  TCACCCTTGTTTAAAACAACACTAATCTTGCCTTTGGAATCTTTAGCATG  200
      || ||||||||| ||||| ||||||||||||||||| |||||||| ||||
seq2  TCGCCCTTGTTTCAAACAGCACTAATCTTGCCTTTGCAATCTTTACCATG  200

seq1  TAAATTCTTGAAAGGCTGTCAAATAGCTTGTAAAACATAATTGTGGGGTT  250
      | ||||||||| ||||||||| ||||||||||||||||||||||||||||
seq2  TCAATTCTTGATAGGCTGTCATATAGCTTGTAAAACATAATTGTGGGGTT  250

seq1  TTGGCTTTTGTGTTGATCCTCAGCAGAAGGTCAGGTTCCTGAGGACAGGA  300
      ||||||||||||||||||||||||| || |||||| |||||| |||  ||
seq2  TTGGCTTTTGTGTTGATCCTCAGCAAAAAGTCAGGGTCCTGACGACCTGA  300

seq1  CCCAATCAGACACTGGCATCATTGAGTCTGGGTCTGTGGTTAACACAAAA  350
       || |||| || |||||||| |||| |||||| |||||  ||||||||||
seq2  ACCCATCACACGCTGGCATCGTTGACTCTGGGACTGTGAATAACACAAAA  350

seq1  ATATAGATTGGATTGCTTAAGGTTTATCTAGAAAGTAGAAACACATACTG  400
      |||||||||||||||||||||||||||||  |||||| ||||||||||||
seq2  ATATAGATTGGATTGCTTAAGGTTTATCTTAAAAGTATAAACACATACTG  400

seq1  AACATTGGGATCTTTAGATGCCACTGCTGAATGACAAAGCTTAGACCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGGGATCTTTAGATGCCACTGCTGAATGACAAAGCTTAGACCCTG  450

seq1  GGAGTCCCTGTCTATAAACAGGGCTCTATCTTATCCACCCTGTGAGAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCCTGTCTATAAACAGGGCTCTATCTTATCCACCCTGTGAGAACC  500

seq1  AGAAGTTAAACTGGAAATCACAGTGTTGAGTAAATGATTAGTTTTAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTAAACTGGAAATCACAGTGTTGAGTAAATGATTAGTTTTAGATT  550

seq1  TCAGGGGCAGCCATGATGTCTCGTGGGTTCCTAGATGACTGTGGATGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGCAGCCATGATGTCTCGTGGGTTCCTAGATGACTGTGGATGCAC  600

seq1  TTGATGCACTTGATATGAATGATGTTGCCACTGCCCACCTTCCTTGAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCACTTGATATGAATGATGTTGCCACTGCCCACCTTCCTTGAGCA  650

seq1  GTGGCGATTATACTAATGCATCAACAAACCCATGGAAGCTTCCTATGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCGATTATACTAATGCATCAACAAACCCATGGAAGCTTCCTATGGCT  700

seq1  TATAGGCTCACCTTCCTCATCTCTGTCACTCATCATCAGCCAAGATGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGCTCACCTTCCTCATCTCTGTCACTCATCATCAGCCAAGATGCAA  750

seq1  AATCATTATCAGAAAACTTCCAGAAATAAACAATGCATATTAATTGTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTATCAGAAAACTTCCAGAAATAAACAATGCATATTAATTGTACA  800

seq1  CTTATCTGATGAAATCTTGAGCCATCCTATCAAATCCAGACCAGAACATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTGATGAAATCTTGAGCCATCCTATCAAATCCAGACCAGAACATA  850

seq1  AGTCATTTCTGTCTATATACATATGATAGCCACATTTGTCAGTCATTTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTTCTGTCTATATACATATGATAGCCACATTTGTCAGTCATTTGG  900

seq1  TAGCTGTCTAGGTGATACACTGACTAATGGGACATCTTGGAGCTTATGAG  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAGCTGTCTAGGTGATACACTGACTAATGGGACATCTT-GAGCTTATGAG  949

seq1  TTTTGGGGGAGGGGGG  966
      ||||||||||||||||
seq2  TTTTGGGGGAGGGGGG  965