BAC Information

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BAC

Clone NameB6Ng01-014J07
Chromosome1 (Build37)
Map Location 50,832,186 - 50,832,719
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666962, EG666970, LOC100041993
Downstream geneTmeff2, Sdpr, LOC383504, Obfc2a, Myo1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014J07.bB6Ng01-014J07.g
ACCDH849081DH849082
length9901,171
definitionDH849081|Mus musculus domesticus DNA, BAC clone: B6Ng01-014J07, 5' end.DH849082|Mus musculus domesticus DNA, BAC clone: B6Ng01-014J07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccatttttaaatggggttgtttgatt
atctggagtccaccttcttgagttctttatatatattgtatattagtccc
ctatctgatttaggataggtaaagaacctttcccaatctgttggtggtct
ttttgtcttattgatggtgccttttgccttgcagaagctttgcaacttta
tgaggtcccatttattgattctcgatcttacagcacaagccattgctgtt
ctattcaggaaatttccccctgcacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagataggaatgaatcaattcgc
attcttctacatgataactgccagttgttagagtaccatttgttgaaaat
gttgtctttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtacagctttaggtccagcatggtgatttcatcataggttctttt
agccttaagaagactttttgctatcctaggttttttgtcattccagatga
atttgcagattgccctttctaattagttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tactatattgatcctgccaatccatgagcatgggagatctttaagtcttc
tgagatcttctttaatttctttcttcagagacttaaagttcttatcatac
agatctttcacttccttagtagagtcacgccgagatatttttatattatt
tgtgactattgagaaggtgttgtttccctaatttctttct
gaattctttgtttagctctgtaccacatttttgaatgggttatttgaatt
tctggagtccagcttcttgagctctttgtatatattggatattagtcccc
tgtcagatttaagatttgtaaaaatcctttcccaatctgttggtggcctt
tttgtcttattgatagtgtcttttgccttgcagaacctttgcaatattct
gaggtcccatttgtcaattcttgatcttacagcacaagcagttgctgttc
tgtttagaagtcttcacctatacccatatttttgaggctttctccaactt
tctcctctataatttttagtgtctctggttttagatggaggtctttgatc
acttagacttgagctttgtacaaggagaaaataatggatcaatttgcatt
cttctacatgatacctgtcagttgttcagcaccatttgttgaaaatgctg
tcttttttccagtagatggttttagctcccttgtcaaagatcaagtgacc
ataggtgtgtggatttatttctgggtcttcaattctattccattgatcta
cctgtctgttgctgaaccagtaccatgcagtttttatcacaattgctctg
tagtattgcttgcggtcaggcatggtgattccagcagaggttcttttatt
attgagaatagtttttgctatcctaggttgcttgttattccagatgaatt
tgaaaattgccctttctaactcagtgaaaaatggagttggaattttgatg
gggattgcattgagtctgtagattacttttggcagaaaaaccattttgac
tctgttaatcctgccaatccatgagcatgggagatctttccatcttctga
gatcttctttgatgtcttttttcagagacttgagttttatcatacagatc
tttcacttccttagttagagtaacaccaaggtattttatatatttgtgac
tattttgacggtgttatttccctatttctttctcactgtttatctttgtg
tagaaaaaggcactaaattgttgagtattttatactagctactgcctttg
aagccttatcagctaagagttctccgtggaaatttaggatagtaatgtac
atatataaactcgcaaaggatttgtaactctctttcaattggcgaccccg
gatctctctgttcagagccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_50832186_50832719
seq2: B6Ng01-014J07.b_44_577 (reverse)

seq1  TGAAGACCCAGAAATGAACCCACACATCTATGGTCACTTAATTTTTGACA  50
      |||||||||||||||||||||||||| |||||||||||| || |||||||
seq2  TGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTTGACA  50

seq1  GGGGAGCTAAAGCCATTCAGTGGAAAAAAGACAGCATTTTCAACAAATGG  100
       |||||||||| |||| |||||| ||||||||| ||||||||||||||||
seq2  AGGGAGCTAAAACCATCCAGTGG-AAAAAGACAACATTTTCAACAAATGG  99

seq1  TGCTGGCACAACTGGCGGTTATCATGCAGAAGAATGTGAAATGATTCATT  150
      | ||   ||||||||| ||||||||| ||||||||| ||| |||||||||
seq2  TACTCTAACAACTGGCAGTTATCATGTAGAAGAATGCGAATTGATTCATT  149

seq1  CCTATCTCCTTGTAGTAATGCCAAATCTAAGTGGATTAAGGAACTCCACT  200
      |||||||||||||| ||| | |||||||||||||||||||||||||||| 
seq2  CCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGGAACTCCACA  199

seq1  TAAAACCAGAGACACTGAAACTTATAGAGGAGAAGGTGGGGAAAAGCCTC  250
      |||||||||||||||||||||||||||||||||| || ||||||||||||
seq2  TAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTAGGGAAAAGCCTC  249

seq1  CAAGATATGGGCACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTG  300
       ||||||||||  |||||| ||| ||||||||||||||||||||||||||
seq2  GAAGATATGGGTGCAGGGGGAAATTTCCTGAATAGAACAGCAATGGCTTG  299

seq1  TGCTGTAAGATTGAGAATGGACAAATGGGAACTCATAAAGTTGCAAACCT  350
      ||||||||||| ||||||  | |||||||| |||||||||||||||| ||
seq2  TGCTGTAAGATCGAGAATCAATAAATGGGACCTCATAAAGTTGCAAAGCT  349

seq1  TCTGTAAGGCAAAAGACACCTTCAATAAGACAAAAAGGCCACCAACAGAT  400
      |||| |||||||||| |||| |||||||||||||||| ||||||||||||
seq2  TCTGCAAGGCAAAAGGCACCATCAATAAGACAAAAAGACCACCAACAGAT  399

seq1  TGGGAGAGGATCTTTACCTATCCTAAATCAAATAGGGGACTAAGATCCAA  450
      ||||| ||| |||||||||||||||||||| |||||||||||| || |||
seq2  TGGGAAAGGTTCTTTACCTATCCTAAATCAGATAGGGGACTAATATACAA  449

seq1  TATATATAAAGAACTTAAGAAGGTGGATTCCAGAAAATCAAATAACCCCA  500
      ||||||||||||||| ||||||||||| |||||| ||||||| |||||||
seq2  TATATATAAAGAACTCAAGAAGGTGGACTCCAGATAATCAAACAACCCCA  499

seq1  -TTAAAAATGGGGCTCAGAGCTGAACAATGAATTC  534
       ||||||||||||||||||||||||||| ||||||
seq2  TTTAAAAATGGGGCTCAGAGCTGAACAAAGAATTC  534