BAC Information

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BAC

Clone NameB6Ng01-014K22
Chromosome1 (Build37)
Map Location 47,371,297 - 47,488,960
singlet/doubletdoublet
Overlap geneEG227061
Upstream geneDnahc7b, LOC666855, Slc39a10
Downstream geneLOC666869, LOC546734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014K22.bB6Ng01-014K22.g
ACCDH849156DH849157
length1,1741,144
definitionDH849156|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K22, 5' end.DH849157|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,487,786 - 47,488,960)(47,371,297 - 47,372,453)
sequence
gaattcttcacaatcttacccaggtgggaagcagcataggataagctaaa
ctataatgaagtatctgtttagatcattataataactctgtaagtagatt
tgatatcaagactgttgatatgctaatattttataacactgatgaagatt
tagaaattgtaacaaacaagatggaaactccaaagcctgtgagaaatggg
gcaagatgccaacaagttctgataacaacaaagattaaatacaaagcaaa
gatttgctgtgtttactaagtgtgctagagaaaaaaattaataactaatg
ctttatttgaaacaagaatcaagaaaattaataaatgcaattgctagtaa
gcaacataatgaagtcccattaagacttgcaacttatcttttctccttcc
taatgaggggactttgcgaatgtaacattcatttaccttcagtttctttt
tcaagaaaacaatgcaaacactgggataagtgttttatcccagtataagt
tgggattaaaagtttaataaaacatatatggtatatgtaattctaaaaca
aagaaaattcactctaatataaaatttcttataataaaacttataataat
agtataatgtagactaagtagaacatgagtggatgctcaacagcatgtaa
gattccaagagaaggaacttaacagacctttgtgaggtcctgattctcta
attgattgactgggtataaaaacactgtacttttcaaaacatgccaccaa
atccagatgctgataaatatattttataaaacctaagagggtttttacag
agataaacatttgggtggtatattcctttatttgttgttgcttccttgct
gctgccgttgtattgttgctttggagattatgaataactgagtagctgta
atagtaagtacatatattttattgagtattgaactagcatgtgtctaaga
ctaccaaagctacagagaattgtatccacaactatgtataactttaatgt
tcctcagtcatctagagttaagcataatttagcaagaaacacgacctgtg
tcctcatcatccatcaccagtcatttcatagtacaagtggaagcaatcta
atcagtgaattctatcatttattttctctttgaaggcctcacgttttcaa
gtcattagaaaccaggaccgacga
gaattctctccaattttctaacctcctttgaaactgtttacattgtcagc
tatatttttaggtatgtgacacatttgaatcagttaccttgcagttgtat
aataagactcacaagcatccttgcctacacagtatattgcctaagtattt
ataccttgcacgctatattcattcagttgcacaagtgaaagccttaattt
aattgccaactattaatatgaataagtggtatgcatttttaagagagtgt
tgttgaacaaaaaggaatcagaacataaaggcttagaaagttctcagcct
gtatatattataaagtttgagaagacttcagaagcgagtagtagggtgtg
gttgtctaattcaatatgagatcatattgtgtgagaagacactctgtcag
tttaaagaataatgagataggatcagataaagagagacttctggattatc
atgattctataggacaggactaggaaactggcagggagaatgcactcatt
tcaagaaagggaattaataattccagaggtgtttcatatatcagtgctca
tgtctgtttcaataaactgatcaatattagagtggcagtattgggtaagg
ttaagtgtgactgtgatcaagaaggcaagatctctccacagaagagcctt
gtgtgtcgttctgtacctgataaagtctctcaactataaccttgcttggc
agaactgcaggagcaggaccaccatcccagtgacctaaaaggcagcatca
caatccaaagtgattcaagaagcagggcatcataccaaagagaggtatcc
acgcatcaaagacataaagggaattgactggctaggttttctttacttgg
aactcacctcctttttctacctctttctagcttgtgatgttttctctttg
gaatggatgtctgcctcatgtttgtcagatcatcacatttaggaggtatg
gtgtttactaaggtttcaaagctgaggacagggcttgatccgcatgatca
aaccttaaattcttatgtctggtcgatgaaattagaacaggtttagacta
aactgatattgaggcttacgatgattgaagggcccgtgattaacttaggt
ctcgtgatatgaaatggattcgaaacttgtgtcgaggcatctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_47487786_47488960
seq2: B6Ng01-014K22.b_46_1219 (reverse)

seq1  TCGTCTGTCCTGGTTTCTAATGACTTTGAAACGTGA-GCCCTCAAAGAGA  49
      ||||| ||||||||||||||||||||  |||||||| ||| |||||||||
seq2  TCGTCGGTCCTGGTTTCTAATGACTTGAAAACGTGAGGCCTTCAAAGAGA  50

seq1  AATAAAATGATAGGAATCACTGA-TAGATTGCTCCAACTTGTAACTATGA  98
      ||  ||||||||| | ||||||| ||||||||| | |||||| |||||| 
seq2  AAATAAATGATAGAATTCACTGATTAGATTGCTTCCACTTGT-ACTATG-  98

seq1  AAATGACTGGTGATGGGATGATGAGGACACAGGTCGTGTCTC-TGCTAAA  147
      |||||||||||||| |||||||||||||||||||||||| || |||||||
seq2  AAATGACTGGTGAT-GGATGATGAGGACACAGGTCGTGTTTCTTGCTAAA  147

seq1  TTATGCCTTAACTCTAGATGACTGAGGAACATTAAAGTTATACATAGTTG  197
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATG-CTTAACTCTAGATGACTGAGGAACATTAAAGTTATACATAGTTG  196

seq1  TGGATACAATTCTCTGTAGCTTTGGTAGTCTTAGACACATGCTAGTTCAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACAATTCTCTGTAGCTTTGGTAGTCTTAGACACATGCTAGTTCAA  246

seq1  TACTCAATAAAATATATGTACTTACTATTACAGCTACTCAGTTATTCATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAATAAAATATATGTACTTACTATTACAGCTACTCAGTTATTCATA  296

seq1  ATCTCCAAAGCAACAATACAACGGCAGCAGCAAGGAAGCAACAACAAATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAAAGCAACAATACAACGGCAGCAGCAAGGAAGCAACAACAAATA  346

seq1  AAGGAATATACCACCCAAATGTTTATCTCTGTAAAAACCCTCTTAGGTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATATACCACCCAAATGTTTATCTCTGTAAAAACCCTCTTAGGTTT  396

seq1  TATAAAATATATTTATCAGCATCTGGATTTGGTGGCATGTTTTGAAAAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATATATTTATCAGCATCTGGATTTGGTGGCATGTTTTGAAAAGT  446

seq1  ACAGTGTTTTTATACCCAGTCAATCAATTAGAGAATCAGGACCTCACAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTTTTTATACCCAGTCAATCAATTAGAGAATCAGGACCTCACAAA  496

seq1  GGTCTGTTAAGTTCCTTCTCTTGGAATCTTACATGCTGTTGAGCATCCAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTAAGTTCCTTCTCTTGGAATCTTACATGCTGTTGAGCATCCAC  546

seq1  TCATGTTCTACTTAGTCTACATTATACTATTATTATAAGTTTTATTATAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTCTACTTAGTCTACATTATACTATTATTATAAGTTTTATTATAA  596

seq1  GAAATTTTATATTAGAGTGAATTTTCTTTGTTTTAGAATTACATATACCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTTATATTAGAGTGAATTTTCTTTGTTTTAGAATTACATATACCA  646

seq1  TATATGTTTTATTAAACTTTTAATCCCAACTTATACTGGGATAAAACACT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTTTATTAAACTTTTAATCCCAACTTATACTGGGATAAAACACT  696

seq1  TATCCCAGTGTTTGCATTGTTTTCTTGAAAAAGAAACTGAAGGTAAATGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAGTGTTTGCATTGTTTTCTTGAAAAAGAAACTGAAGGTAAATGA  746

seq1  ATGTTACATTCGCAAAGTCCCCTCATTAGGAAGGAGAAAAGATAAGTTGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACATTCGCAAAGTCCCCTCATTAGGAAGGAGAAAAGATAAGTTGC  796

seq1  AAGTCTTAATGGGACTTCATTATGTTGCTTACTAGCAATTGCATTTATTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTAATGGGACTTCATTATGTTGCTTACTAGCAATTGCATTTATTA  846

seq1  ATTTTCTTGATTCTTGTTTCAAATAAAGCATTAGTTATTAATTTTTTTCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTGATTCTTGTTTCAAATAAAGCATTAGTTATTAATTTTTTTCT  896

seq1  CTAGCACACTTAGTAAACACAGCAAATCTTTGCTTTGTATTTAATCTTTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACACTTAGTAAACACAGCAAATCTTTGCTTTGTATTTAATCTTTG  946

seq1  TTGTTATCAGAACTTGTTGGCATCTTGCCCCATTTCTCACAGGCTTTGGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATCAGAACTTGTTGGCATCTTGCCCCATTTCTCACAGGCTTTGGA  996

seq1  GTTTCCATCTTGTTTGTTACAATTTCTAAATCTTCATCAGTGTTATAAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATCTTGTTTGTTACAATTTCTAAATCTTCATCAGTGTTATAAAA  1046

seq1  TATTAGCATATCAACAGTCTTGATATCAAATCTACTTACAGAGTTATTAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCATATCAACAGTCTTGATATCAAATCTACTTACAGAGTTATTAT  1096

seq1  AATGATCTAAACAGATACTTCATTATAGTTTAGCTTATCCTATGCTGCTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCTAAACAGATACTTCATTATAGTTTAGCTTATCCTATGCTGCTT  1146

seq1  CCCACCTGGGTAAGATTGTGAAGAATTC  1175
      ||||||||||||||||||||||||||||
seq2  CCCACCTGGGTAAGATTGTGAAGAATTC  1174

seq1: chr1_47371297_47372453
seq2: B6Ng01-014K22.g_68_1211

seq1  GAATTCTCTCCAATTTTCTAACCTCCTTTGAAACTGTTTACATTGTCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCAATTTTCTAACCTCCTTTGAAACTGTTTACATTGTCAGC  50

seq1  TATATTTTTAGGTATGTGACACATTTGAATCAGTTACCTTGCAGTTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTAGGTATGTGACACATTTGAATCAGTTACCTTGCAGTTGTAT  100

seq1  AATAAGACTCACAAGCATCCTTGCCTACACAGTATATTGCCTAAGTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGACTCACAAGCATCCTTGCCTACACAGTATATTGCCTAAGTATTT  150

seq1  ATACCTTGCACGCTATATTCATTCAGTTGCACAAGTGAAAGCCTTAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTGCACGCTATATTCATTCAGTTGCACAAGTGAAAGCCTTAATTT  200

seq1  AATTGCCAACTATTAATATGAATAAGTGGTATGCATTTTTAAGAGAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCCAACTATTAATATGAATAAGTGGTATGCATTTTTAAGAGAGTGT  250

seq1  TGTTGAACAAAAAGGAATCAGAACATAAAGGCTTAGAAAGTTCTCAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAACAAAAAGGAATCAGAACATAAAGGCTTAGAAAGTTCTCAGCCT  300

seq1  GTATATATTATAAAGTTTGAGAAGACTTCAGAAGCGAGTAGTAGGGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATTATAAAGTTTGAGAAGACTTCAGAAGCGAGTAGTAGGGTGTG  350

seq1  GTTGTCTAATTCAATATGAGATCATATTGTGTGAGAAGACACTCTGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTAATTCAATATGAGATCATATTGTGTGAGAAGACACTCTGTCAG  400

seq1  TTTAAAGAATAATGAGATAGGATCAGATAAAGAGAGACTTCTGGATTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAATAATGAGATAGGATCAGATAAAGAGAGACTTCTGGATTATC  450

seq1  ATGATTCTATAGGACAGGACTAGGAAACTGGCAGGGAGAATGCACTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTATAGGACAGGACTAGGAAACTGGCAGGGAGAATGCACTCATT  500

seq1  TCAAGAAAGGGAATTAATAATTCCAGAGGTGTTTCATATATCAGTGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAAGGGAATTAATAATTCCAGAGGTGTTTCATATATCAGTGCTCA  550

seq1  TGTCTGTTTCAATAAACTGATCAATATTAGAGTGGCAGTATTGGGTAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTTCAATAAACTGATCAATATTAGAGTGGCAGTATTGGGTAAGG  600

seq1  TTAAGTGTGACTGTGATCAAGAAGGCAAGATCTCTCCACAGAAGAGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGTGACTGTGATCAAGAAGGCAAGATCTCTCCACAGAAGAGCCTT  650

seq1  GTGTGTCGTTCTGTACCTGATAAAGTCTCTCAACTATAACCTTGCTTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCGTTCTGTACCTGATAAAGTCTCTCAACTATAACCTTGCTTGGC  700

seq1  AGAACTGCAGGAGCAGGACCACCATCCCAGTGACCTAAAAGGCAGCATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGCAGGAGCAGGACCACCATCCCAGTGACCTAAAAGGCAGCATCA  750

seq1  CAATCCAAAGTGATTCAGGAAGCAGGGCATCATACCAAAGAGAGGTATCC  800
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CAATCCAAAGTGATTCAAGAAGCAGGGCATCATACCAAAGAGAGGTATCC  800

seq1  ACGCATCAAAGACATAAAGGGAATTGACTGGCTAGGTTTTCTTTACTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATCAAAGACATAAAGGGAATTGACTGGCTAGGTTTTCTTTACTTGG  850

seq1  AACTCACCTCCTTTTTCTACCTCTTTCTAGCTTGTGATGTTTTTCTCTTT  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AACTCACCTCCTTTTTCTACCTCTTTCTAGCTTGTGATG-TTTTCTCTTT  899

seq1  GGAATGGGAATGTCTGCCTCATGTTTGTCAGATCATCACATTTTAGAGGT  950
      |||||||  ||||||||||||||||||||||||||||||||||  |||||
seq2  GGAATGG--ATGTCTGCCTCATGTTTGTCAGATCATCACATTTAGGAGGT  947

seq1  ATGGTGTTTACTAA-GTTTCAAAGCTTGAGACAGGGCTTTTGATTCCGCA  999
      |||||||||||||| |||||||||||   ||||||||  |||| ||||||
seq2  ATGGTGTTTACTAAGGTTTCAAAGCTGAGGACAGGGC--TTGA-TCCGCA  994

seq1  TGAATCAAACCTT-AATTCTTATGTCTGGTTCAGATGACATTTAGAACAG  1048
      || |||||||||| ||||||||||||||||   ||||| | |||||||||
seq2  TG-ATCAAACCTTAAATTCTTATGTCTGGT--CGATGA-AATTAGAACAG  1040

seq1  GGTTTTAGACTTAAAACTGATATTGAGCTTAACAGATGATTGAAAGGGGC  1098
      |  ||||||||  ||||||||||||||  | || |||||||| ||||| |
seq2  G--TTTAGACT--AAACTGATATTGAGGCTTAC-GATGATTG-AAGGGCC  1084

seq1  TGGGTTTAACTATGGTCT--GGATATGAAATGGGATTCAGAAACTTGTGT  1146
       | | ||||||  |||||   |||||||||| |||||| |||||||||||
seq2  CGTGATTAACTTAGGTCTCGTGATATGAAAT-GGATTC-GAAACTTGTGT  1132

seq1  CCAGGCA-CTCG  1157
      | ||||| ||||
seq2  CGAGGCATCTCG  1144