BAC Information

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BAC

Clone NameB6Ng01-014L06
Chromosome1 (Build37)
Map Location 49,182,776 - 49,183,856
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546734, LOC674566, LOC100041936, LOC666903, LOC666909, 2900045O20Rik
Downstream geneLOC666924, C230029F24Rik, LOC627430, LOC100041981, EG666962
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014L06.bB6Ng01-014L06.g
ACCDH849169DH849170
length1,1261,000
definitionDH849169|Mus musculus domesticus DNA, BAC clone: B6Ng01-014L06, 5' end.DH849170|Mus musculus domesticus DNA, BAC clone: B6Ng01-014L06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaggcatccagattagtccatgctgttgaacttcctatggatt
tgccatccccttcagctccttcacatccattaaggttccccacctcagtc
cactggttcactggaactctttgcatctgtctcagttaggggttgggagg
atttctgagagacaaccatggtaggctcctgtctgcaagcacaacaaagt
atcattaattttgtccaggtttgggacctatccaagggatagatcccaag
ttggcctggtcactggacggccttttcttcaatctctgttccagttttgt
taatgtgtttcttttagtcaggaacaattctggatcaaaaactttgaagg
taggttgttaaccctgtcctccaaaggaggccctgtctatttactggaga
ttgtctcttcaggttccatctccctatggttgggtatttcagataaggtc
atccacactcaattttgggaacttctcaaaccctgggtctctggaacact
ctagaatttccccacccccaaccccacagctgactatttccatttaatta
ttttactcttatttgtttatactttgaaatctcatacttataaacaatgc
attctgattattctttgtaccatctctttatctttccaatccctgtctac
cctttttcctctctgccagtctttccctggatacaggacttttggatttt
tcttgtttttctgtttgtttctttggagagtgaattctatattttcaaaa
ctcacttcttactagaattttaaatttttatttagtatgatttcattagt
tacaattcttcactgtaaaatctctaaatgtatattgacatatttatgat
atagcttatttataaacttaattttatatcttcagaacttttctaataga
tatttcttcaatatgtggctttgtgcttaattgtaatatttaagttttgc
ttcatgaaatttaatgtatttccctataatgtattttcccaaagctactt
cacataacttttatagtatagtcatataatatcacagcattggggacaac
cttacatttaataaaagaaatgttagtattactgagaaataccaaagacc
ttcccttgtctatgatttcatttgcc
gaattcctagaattatcttaatagttattaagctcttttatgataggact
gctattaagtcctctcagataaccaaaattgcaattagacctcttttcaa
tattcaagtgtcacaagttaattgcttctgagataacaagctgacctcta
caacttagagcacattcaaagaggttataaaagaattaaccaaaggtcat
aaaaagggaaccaaagatttactatagttacaagaacagaagataaaata
ttcactaataacttagtcttaaaaattacaaattttaaccttttaatgaa
ccttttaagctagtgacaggtaataaatattcaaccagatatttactcta
aatagatatacatgaagacaattttgtaaatatcttattcaatttatgac
ttgaatttatatttgaacttctagtgaacttctgtaagaacaaaaggaat
gattggaaaaaacatacaatccattctcctagaaaaggtacaaaatacta
ggagaaattacattggaaggcataacattggagacatagcactggaaaca
gagaatcgagtgtaaggtattgggagcaaaagcaatgttgaaccagaaca
ggaggagaaagcaagacttgaatgcagagtggaataacattgaaattata
agacaacttaaaaaaaataagagaggaatatgcagaatgcaaagagagtg
agggaagtaaaagaagctacacagacacagaaggaaaagacaggctactc
tttaccatgggatggaacagttctttttaataatagcaaggcaggcttag
tcctgataaagagaacacagctttcttcttacagacatgggtttaattca
tttagcaataaaaagggtagaagctttctatttcgctatacaataaagaa
ttctagctcattttcatttcccaggatgaggggatgtcttcctacagtgg
tgggtgttgggtcttttgctccataatgcataatgttaagtgtgtgtgtg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_49182776_49183856
seq2: B6Ng01-014L06.b_92_1168 (reverse)

seq1  GGCAAATGAAATCAT-GACCAGGGAA-GTCTTTTGTATATCTCAGGTTAA  48
      ||||||||||||||| ||| |||||| |||||| |||| ||||||  |||
seq2  GGCAAATGAAATCATAGACAAGGGAAGGTCTTTGGTATTTCTCAG--TAA  48

seq1  TACT-ACATATTCTTTTATT-AATGTAAGTTTGTCCCCAATGCCTGTTGA  96
      |||| |||| |||||||||| |||||||| |||||||||||| ||| |||
seq2  TACTAACAT-TTCTTTTATTAAATGTAAGGTTGTCCCCAATG-CTG-TGA  95

seq1  TATTATTTGACTATACTATATAAGTTATTGTGAAGTAGCTTTGGGAAATT  146
      |||||| ||||||||||||| |||||| |||||||||||||||||||| |
seq2  TATTATATGACTATACTATAAAAGTTA-TGTGAAGTAGCTTTGGGAAAAT  144

seq1  ACATTATAGGGAAATTACATTAAATTTCATGAAGCAAAACTTAAATATTA  196
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACATTATAGGGAAA-TACATTAAATTTCATGAAGCAAAACTTAAATATTA  193

seq1  CAATTAAGCACAAAGCCACATATTTGAAGAAATATCTATTAG-AAAGTTC  245
      |||||||||||||||||||||| ||||||||||||||||||| |||||||
seq2  CAATTAAGCACAAAGCCACATA-TTGAAGAAATATCTATTAGAAAAGTTC  242

seq1  TGAAGATTATAAAATTAAGTTTATAAATAAGCTATATCATAAATATGTCA  295
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGA-TATAAAATTAAGTTTATAAATAAGCTATATCATAAATATGTCA  291

seq1  ATATACATTTAGAGATTTTACAGTGAAGAATTGTAACTAATGAAATCATA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATTTAGAGATTTTACAGTGAAGAATTGTAACTAATGAAATCATA  341

seq1  CTAAATAAAAATTTAAAATTCTAGTAAGAAGTGAGTTTTGAAAATATAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAAAATTTAAAATTCTAGTAAGAAGTGAGTTTTGAAAATATAGA  391

seq1  ATTCACTCTCCAAAGAAACAAACAGAAAAACAAGAAAAATCCAAAAGTCC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTCTCCAAAGAAACAAACAGAAAAACAAGAAAAATCCAAAAGTCC  441

seq1  TGTATCCAGGGAAAGACTGGCAGAGAGGAAAAAGGGTAGACAGGGATTGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCAGGGAAAGACTGGCAGAGAGGAAAAAGGGTAGACAGGGATTGG  491

seq1  AAAGATAAAGAGATGGTACAAAGAATAATCAGAATGCATTGTTTATAAGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAAAGAGATGGTACAAAGAATAATCAGAATGCATTGTTTATAAGT  541

seq1  ATGAGATTTCAAAGTATAAACAAATAAGAGTAAAATAATTAAATGGAAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTTCAAAGTATAAACAAATAAGAGTAAAATAATTAAATGGAAAT  591

seq1  AGTCAGCTGTGGGGTTGGGGGTGGGGAAATTCTAGAGTGTTCCAGAGACC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCTGTGGGGTTGGGGGTGGGGAAATTCTAGAGTGTTCCAGAGACC  641

seq1  CAGGGTTTGAGAAGTTCCCAAAATTGAGTGTGGATGACCTTATCTGAAAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTGAGAAGTTCCCAAAATTGAGTGTGGATGACCTTATCTGAAAT  691

seq1  ACCCAACCATAGGGAGATGGAACCTGAAGAGACAATCTCCAGTAAATAGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACCATAGGGAGATGGAACCTGAAGAGACAATCTCCAGTAAATAGA  741

seq1  CAGGGCCTCCTTTGGAGGACAGGGTTAACAACCTACCTTCAAAGTTTTTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCTCCTTTGGAGGACAGGGTTAACAACCTACCTTCAAAGTTTTTG  791

seq1  ATCCAGAATTGTTCCTGACTAAAAGAAACACATTAACAAAACTGGAACAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAATTGTTCCTGACTAAAAGAAACACATTAACAAAACTGGAACAG  841

seq1  AGATTGAAGAAAAGGCCGTCCAGTGACCAGGCCAACTTGGGATCTATCCC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGAAGAAAAGGCCGTCCAGTGACCAGGCCAACTTGGGATCTATCCC  891

seq1  TTGGATAGGTCCCAAACCTGGACAAAATTAATGATACTTTGTTGTGCTTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATAGGTCCCAAACCTGGACAAAATTAATGATACTTTGTTGTGCTTG  941

seq1  CAGACAGGAGCCTACCATGGTTGTCTCTCAGAAATCCTCCCAACCCCTAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGGAGCCTACCATGGTTGTCTCTCAGAAATCCTCCCAACCCCTAA  991

seq1  CTGAGACAGATGCAAAGAGTTCCAGTGAACCAGTGGACTGAGGTGGGGAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACAGATGCAAAGAGTTCCAGTGAACCAGTGGACTGAGGTGGGGAA  1041

seq1  CCTTAATGGATGTGAAGGAGCTGAAGGGGATGGCAA  1081
      ||||||||||||||||||||||||||||||||||||
seq2  CCTTAATGGATGTGAAGGAGCTGAAGGGGATGGCAA  1077